BLASTX nr result

ID: Coptis25_contig00045271 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00045271
         (343 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274152.1| PREDICTED: HVA22-like protein a [Vitis vinif...    98   6e-19
ref|XP_002449810.1| hypothetical protein SORBIDRAFT_05g023740 [S...    97   1e-18
ref|XP_002330123.1| predicted protein [Populus trichocarpa] gi|2...    96   2e-18
gb|ABK92808.1| unknown [Populus trichocarpa]                           96   2e-18
gb|AFK39970.1| unknown [Medicago truncatula]                           96   3e-18

>ref|XP_002274152.1| PREDICTED: HVA22-like protein a [Vitis vinifera]
           gi|296086388|emb|CBI31977.3| unnamed protein product
           [Vitis vinifera]
          Length = 171

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 43/78 (55%), Positives = 56/78 (71%)
 Frame = -2

Query: 234 MGFVQLFMCVATSFHGVAWPLITLIYPLYASVRAIESNSHAENRKWLTYWVLYGLIMVFE 55
           MG       VA +F   A PL+ L+YPLYAS++AIE+ S A++++WLTYWVLY LI +FE
Sbjct: 1   MGSENFLTVVAKNFDVFAGPLVALVYPLYASIKAIETKSRADDQQWLTYWVLYSLITLFE 60

Query: 54  FTFAVLIEWLPLWPVIKL 1
            TFA L+EW P+WP  KL
Sbjct: 61  LTFAKLLEWFPIWPYAKL 78


>ref|XP_002449810.1| hypothetical protein SORBIDRAFT_05g023740 [Sorghum bicolor]
           gi|241935653|gb|EES08798.1| hypothetical protein
           SORBIDRAFT_05g023740 [Sorghum bicolor]
          Length = 320

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 44/78 (56%), Positives = 57/78 (73%)
 Frame = -2

Query: 234 MGFVQLFMCVATSFHGVAWPLITLIYPLYASVRAIESNSHAENRKWLTYWVLYGLIMVFE 55
           MG   L   VA +F  +A PL+ L YPLYASV+AIE+ S  ++++WLTYWVLY LI +FE
Sbjct: 1   MGSGSLLKVVANNFDVLAGPLVALAYPLYASVKAIETKSPVDDQQWLTYWVLYSLITLFE 60

Query: 54  FTFAVLIEWLPLWPVIKL 1
            TFA +I+WLP WP +KL
Sbjct: 61  LTFASIIQWLPFWPSMKL 78


>ref|XP_002330123.1| predicted protein [Populus trichocarpa] gi|222871257|gb|EEF08388.1|
           predicted protein [Populus trichocarpa]
          Length = 173

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 38/66 (57%), Positives = 55/66 (83%)
 Frame = -2

Query: 198 SFHGVAWPLITLIYPLYASVRAIESNSHAENRKWLTYWVLYGLIMVFEFTFAVLIEWLPL 19
           +F  +A P+I+L+YPLYAS+RAIE+ SH ++++WLTYW+LY +I +FE TFA +IEW+P+
Sbjct: 15  NFDVLAGPVISLVYPLYASIRAIETKSHVDDKQWLTYWILYSMITLFELTFAKVIEWIPI 74

Query: 18  WPVIKL 1
           WP  KL
Sbjct: 75  WPFAKL 80


>gb|ABK92808.1| unknown [Populus trichocarpa]
          Length = 173

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 38/66 (57%), Positives = 55/66 (83%)
 Frame = -2

Query: 198 SFHGVAWPLITLIYPLYASVRAIESNSHAENRKWLTYWVLYGLIMVFEFTFAVLIEWLPL 19
           +F  +A P+I+L+YPLYAS+RAIE+ SH ++++WLTYW+LY +I +FE TFA +IEW+P+
Sbjct: 15  NFDVLAGPVISLVYPLYASIRAIETKSHVDDKQWLTYWILYSMITLFELTFAKVIEWIPI 74

Query: 18  WPVIKL 1
           WP  KL
Sbjct: 75  WPFAKL 80


>gb|AFK39970.1| unknown [Medicago truncatula]
          Length = 173

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 42/77 (54%), Positives = 57/77 (74%)
 Frame = -2

Query: 231 GFVQLFMCVATSFHGVAWPLITLIYPLYASVRAIESNSHAENRKWLTYWVLYGLIMVFEF 52
           G     M +  +F  +A P+I+L+YPLYASVRAIES S  ++++WLTYWVLY LI +FE 
Sbjct: 7   GAGSFLMVLLRNFDVLAGPVISLVYPLYASVRAIESKSPVDDQQWLTYWVLYSLITLFEL 66

Query: 51  TFAVLIEWLPLWPVIKL 1
           TFA ++EW+P+WP  KL
Sbjct: 67  TFAKILEWIPIWPYAKL 83


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