BLASTX nr result
ID: Coptis25_contig00045263
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00045263 (297 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AEM68313.1| beta tubulin, partial [Malletia abyssorum] 61 1e-07 gb|ABO61509.1| beta tubulin [Bodonidae sp. SL200c] 61 1e-07 gb|ACI16015.1| beta-tubulin [Bodo saltans] 61 1e-07 gb|ABJ81001.1| beta tubulin, partial [Neobodo designis] 61 1e-07 dbj|BAK52333.1| beta-tubulin, partial [Kipferlia bialata] 60 1e-07 >gb|AEM68313.1| beta tubulin, partial [Malletia abyssorum] Length = 302 Score = 60.8 bits (146), Expect = 1e-07 Identities = 31/58 (53%), Positives = 38/58 (65%) Frame = -1 Query: 249 ISSL*VNLIPCPSLHFFMVRFATLRSTGAQKYRFLPVPVLTQQK*GTKSTMSASGPWH 76 + L VNL+P P LHFFM+ FA L S G+Q+YR L VP LTQQ K+ M A+ P H Sbjct: 223 LRKLAVNLVPFPRLHFFMMGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMQAADPRH 280 >gb|ABO61509.1| beta tubulin [Bodonidae sp. SL200c] Length = 376 Score = 60.8 bits (146), Expect = 1e-07 Identities = 31/58 (53%), Positives = 38/58 (65%) Frame = -1 Query: 249 ISSL*VNLIPCPSLHFFMVRFATLRSTGAQKYRFLPVPVLTQQK*GTKSTMSASGPWH 76 + L VNL+P P LHFFM+ FA L S G+Q+YR L VP LTQQ K+ M A+ P H Sbjct: 242 LRKLAVNLVPFPRLHFFMMGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMQAADPRH 299 >gb|ACI16015.1| beta-tubulin [Bodo saltans] Length = 442 Score = 60.8 bits (146), Expect = 1e-07 Identities = 31/58 (53%), Positives = 38/58 (65%) Frame = -1 Query: 249 ISSL*VNLIPCPSLHFFMVRFATLRSTGAQKYRFLPVPVLTQQK*GTKSTMSASGPWH 76 + L VNL+P P LHFFM+ FA L S G+Q+YR L VP LTQQ K+ M A+ P H Sbjct: 250 LRKLAVNLVPFPRLHFFMMGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMQAADPRH 307 >gb|ABJ81001.1| beta tubulin, partial [Neobodo designis] Length = 403 Score = 60.8 bits (146), Expect = 1e-07 Identities = 31/58 (53%), Positives = 38/58 (65%) Frame = -1 Query: 249 ISSL*VNLIPCPSLHFFMVRFATLRSTGAQKYRFLPVPVLTQQK*GTKSTMSASGPWH 76 + L VNL+P P LHFFM+ FA L S G+Q+YR L VP LTQQ K+ M A+ P H Sbjct: 233 LRKLAVNLVPFPRLHFFMMGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMQAADPRH 290 >dbj|BAK52333.1| beta-tubulin, partial [Kipferlia bialata] Length = 408 Score = 60.5 bits (145), Expect = 1e-07 Identities = 31/58 (53%), Positives = 38/58 (65%) Frame = -1 Query: 249 ISSL*VNLIPCPSLHFFMVRFATLRSTGAQKYRFLPVPVLTQQK*GTKSTMSASGPWH 76 + L VNL+P P LHFF+V FA L S G+Q+YR L VP LT Q K+ M+AS P H Sbjct: 245 LRKLAVNLVPFPRLHFFLVGFAPLASRGSQQYRALTVPELTSQMFDNKNMMAASDPRH 302