BLASTX nr result
ID: Coptis25_contig00045234
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00045234 (233 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003628710.1| Pentatricopeptide repeat-containing protein ... 130 1e-28 ref|XP_003541343.1| PREDICTED: putative pentatricopeptide repeat... 130 1e-28 ref|XP_004135421.1| PREDICTED: putative pentatricopeptide repeat... 129 2e-28 ref|XP_002267613.1| PREDICTED: putative pentatricopeptide repeat... 129 3e-28 ref|XP_002452563.1| hypothetical protein SORBIDRAFT_04g028180 [S... 124 8e-27 >ref|XP_003628710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula] gi|355522732|gb|AET03186.1| Pentatricopeptide repeat-containing protein [Medicago truncatula] Length = 748 Score = 130 bits (327), Expect = 1e-28 Identities = 60/77 (77%), Positives = 69/77 (89%) Frame = +1 Query: 1 YTFGSVLTACGGLLALQHGKQIHAYIIRTDYKDNIFVGSALVDMYSKCGSIRHAEKVFKQ 180 YTFGSVLTACGG++ALQ GKQ+HAYIIRTDYKDNIFV SALVDMY KC +I+ AE VFK+ Sbjct: 276 YTFGSVLTACGGVMALQEGKQVHAYIIRTDYKDNIFVASALVDMYCKCKNIKSAEAVFKK 335 Query: 181 MVHKNIVSWTSLLVGYG 231 M KN+VSWT++LVGYG Sbjct: 336 MTCKNVVSWTAMLVGYG 352 Score = 67.4 bits (163), Expect = 1e-09 Identities = 30/76 (39%), Positives = 49/76 (64%) Frame = +1 Query: 1 YTFGSVLTACGGLLALQHGKQIHAYIIRTDYKDNIFVGSALVDMYSKCGSIRHAEKVFKQ 180 +T GSV+++C L +L+ G Q HA + + I V +ALV +Y KCGSI + ++F + Sbjct: 377 FTLGSVISSCANLASLEEGAQFHARALTSGLISFITVSNALVTLYGKCGSIEDSHRLFNE 436 Query: 181 MVHKNIVSWTSLLVGY 228 + K+ V+WT+L+ GY Sbjct: 437 ISFKDEVTWTALVSGY 452 Score = 63.2 bits (152), Expect = 2e-08 Identities = 29/74 (39%), Positives = 47/74 (63%) Frame = +1 Query: 4 TFGSVLTACGGLLALQHGKQIHAYIIRTDYKDNIFVGSALVDMYSKCGSIRHAEKVFKQM 183 TF ++L ++ G+QIH ++++ + +FVGS LVDMYSK G I A KVF ++ Sbjct: 145 TFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGMISCARKVFDEL 204 Query: 184 VHKNIVSWTSLLVG 225 KN+V + +L++G Sbjct: 205 PEKNVVMYNTLIMG 218 >ref|XP_003541343.1| PREDICTED: putative pentatricopeptide repeat-containing protein At1g68930-like [Glycine max] Length = 747 Score = 130 bits (326), Expect = 1e-28 Identities = 60/77 (77%), Positives = 70/77 (90%) Frame = +1 Query: 1 YTFGSVLTACGGLLALQHGKQIHAYIIRTDYKDNIFVGSALVDMYSKCGSIRHAEKVFKQ 180 YTFGSVLTACGG++ALQ GKQ+HAYIIRTDY+DNIFVGSALVDMY KC SI+ AE VF++ Sbjct: 275 YTFGSVLTACGGVMALQEGKQVHAYIIRTDYQDNIFVGSALVDMYCKCKSIKSAETVFRK 334 Query: 181 MVHKNIVSWTSLLVGYG 231 M KN+VSWT++LVGYG Sbjct: 335 MNCKNVVSWTAMLVGYG 351 Score = 66.2 bits (160), Expect = 3e-09 Identities = 30/76 (39%), Positives = 48/76 (63%) Frame = +1 Query: 1 YTFGSVLTACGGLLALQHGKQIHAYIIRTDYKDNIFVGSALVDMYSKCGSIRHAEKVFKQ 180 +T GSV+++C L +L+ G Q H + + I V +ALV +Y KCGSI + ++F + Sbjct: 376 FTLGSVISSCANLASLEEGAQFHCRALVSGLISFITVSNALVTLYGKCGSIEDSHRLFSE 435 Query: 181 MVHKNIVSWTSLLVGY 228 M + + VSWT+L+ GY Sbjct: 436 MSYVDEVSWTALVSGY 451 Score = 55.8 bits (133), Expect = 3e-06 Identities = 23/57 (40%), Positives = 38/57 (66%) Frame = +1 Query: 55 GKQIHAYIIRTDYKDNIFVGSALVDMYSKCGSIRHAEKVFKQMVHKNIVSWTSLLVG 225 G Q+H ++++ ++ +FVGS LVDMYSK G + A + F +M KN+V + +L+ G Sbjct: 161 GLQVHGHVVKFGFQSYVFVGSPLVDMYSKTGLVFCARQAFDEMPEKNVVMYNTLIAG 217 >ref|XP_004135421.1| PREDICTED: putative pentatricopeptide repeat-containing protein At1g68930-like [Cucumis sativus] gi|449493520|ref|XP_004159329.1| PREDICTED: putative pentatricopeptide repeat-containing protein At1g68930-like [Cucumis sativus] Length = 743 Score = 129 bits (325), Expect = 2e-28 Identities = 57/77 (74%), Positives = 70/77 (90%) Frame = +1 Query: 1 YTFGSVLTACGGLLALQHGKQIHAYIIRTDYKDNIFVGSALVDMYSKCGSIRHAEKVFKQ 180 +TFGSVLTACGG LAL GKQIHAYIIRTDY+DNIFVGSAL+DMY KC ++++AE VF++ Sbjct: 271 FTFGSVLTACGGFLALDEGKQIHAYIIRTDYQDNIFVGSALLDMYCKCRNVKYAEAVFRK 330 Query: 181 MVHKNIVSWTSLLVGYG 231 M HKN++SWT++LVGYG Sbjct: 331 MRHKNVISWTAMLVGYG 347 Score = 68.2 bits (165), Expect = 7e-10 Identities = 29/76 (38%), Positives = 49/76 (64%) Frame = +1 Query: 1 YTFGSVLTACGGLLALQHGKQIHAYIIRTDYKDNIFVGSALVDMYSKCGSIRHAEKVFKQ 180 +T GSV+++C L +L+ G Q H + + + V +AL+ +Y KCGS+ HA ++F + Sbjct: 372 FTLGSVISSCANLASLEEGAQFHGQALASGLICFVTVSNALITLYGKCGSLEHAHQLFHE 431 Query: 181 MVHKNIVSWTSLLVGY 228 M ++ VSWT+L+ GY Sbjct: 432 MKIRDEVSWTALVSGY 447 Score = 59.7 bits (143), Expect = 2e-07 Identities = 28/74 (37%), Positives = 45/74 (60%) Frame = +1 Query: 4 TFGSVLTACGGLLALQHGKQIHAYIIRTDYKDNIFVGSALVDMYSKCGSIRHAEKVFKQM 183 TF ++L + G+QIH I + Y+ +FVGS LVDMY+K G I A ++F+++ Sbjct: 140 TFSTMLILSSNRGFVDLGRQIHGQIFKFGYQSYLFVGSPLVDMYAKTGFINDANRIFEEI 199 Query: 184 VHKNIVSWTSLLVG 225 KNIV + +++ G Sbjct: 200 PEKNIVVYNTMITG 213 >ref|XP_002267613.1| PREDICTED: putative pentatricopeptide repeat-containing protein At1g68930 [Vitis vinifera] gi|297738214|emb|CBI27415.3| unnamed protein product [Vitis vinifera] Length = 743 Score = 129 bits (323), Expect = 3e-28 Identities = 59/77 (76%), Positives = 69/77 (89%) Frame = +1 Query: 1 YTFGSVLTACGGLLALQHGKQIHAYIIRTDYKDNIFVGSALVDMYSKCGSIRHAEKVFKQ 180 +TFGSVLTACG LLAL GKQIHAY+IRTD+KDN+FVGSALVDMYSKC SI+ AE VFK+ Sbjct: 271 FTFGSVLTACGSLLALGEGKQIHAYVIRTDHKDNVFVGSALVDMYSKCRSIKSAETVFKR 330 Query: 181 MVHKNIVSWTSLLVGYG 231 M KN++SWT++LVGYG Sbjct: 331 MPQKNVISWTAMLVGYG 347 Score = 65.5 bits (158), Expect = 4e-09 Identities = 29/76 (38%), Positives = 48/76 (63%) Frame = +1 Query: 1 YTFGSVLTACGGLLALQHGKQIHAYIIRTDYKDNIFVGSALVDMYSKCGSIRHAEKVFKQ 180 +T GSV+++C L +L+ G Q H + + I V +AL+ +Y KCGS ++ ++F + Sbjct: 372 FTLGSVISSCANLASLEEGAQFHCRALVSGLISFITVSNALITLYGKCGSTENSHRLFTE 431 Query: 181 MVHKNIVSWTSLLVGY 228 M ++ VSWT+LL GY Sbjct: 432 MNIRDEVSWTALLAGY 447 Score = 58.2 bits (139), Expect = 7e-07 Identities = 26/74 (35%), Positives = 45/74 (60%) Frame = +1 Query: 4 TFGSVLTACGGLLALQHGKQIHAYIIRTDYKDNIFVGSALVDMYSKCGSIRHAEKVFKQM 183 TF ++L C + G+QI+ I++ + ++FVGS LVDMY+K G I A++ F +M Sbjct: 140 TFSTMLILCSKFRCVDLGRQINGQILKFGFGSDVFVGSPLVDMYTKLGLIYDAKRYFDEM 199 Query: 184 VHKNIVSWTSLLVG 225 +N+V +++ G Sbjct: 200 PERNVVMCNTMITG 213 >ref|XP_002452563.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor] gi|241932394|gb|EES05539.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor] Length = 745 Score = 124 bits (311), Expect = 8e-27 Identities = 58/77 (75%), Positives = 67/77 (87%) Frame = +1 Query: 1 YTFGSVLTACGGLLALQHGKQIHAYIIRTDYKDNIFVGSALVDMYSKCGSIRHAEKVFKQ 180 YTFGS+LTACG L AL+ GKQIHAYIIRT Y DN+FVGSALVDMYSKC SI+ AE VF++ Sbjct: 273 YTFGSILTACGALSALEQGKQIHAYIIRTRYDDNVFVGSALVDMYSKCRSIKLAETVFRR 332 Query: 181 MVHKNIVSWTSLLVGYG 231 M KNI+SWT+L+VGYG Sbjct: 333 MTCKNIISWTALIVGYG 349 Score = 68.9 bits (167), Expect = 4e-10 Identities = 32/76 (42%), Positives = 47/76 (61%) Frame = +1 Query: 1 YTFGSVLTACGGLLALQHGKQIHAYIIRTDYKDNIFVGSALVDMYSKCGSIRHAEKVFKQ 180 YT GSV+++C L +L+ G Q H + + I V +ALV +Y KCGSI A ++F + Sbjct: 374 YTLGSVISSCANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDE 433 Query: 181 MVHKNIVSWTSLLVGY 228 M + VSWT+L+ GY Sbjct: 434 MSFHDQVSWTALVSGY 449