BLASTX nr result

ID: Coptis25_contig00045225 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00045225
         (363 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001234593.1| myo-inositol oxygenase [Solanum lycopersicum...   217   7e-55
ref|XP_002892814.1| myo-inisitol oxygenase [Arabidopsis lyrata s...   216   2e-54
ref|XP_002283119.1| PREDICTED: probable inositol oxygenase [Viti...   215   3e-54
gb|ABK24160.1| unknown [Picea sitchensis]                             215   3e-54
emb|CAN78063.1| hypothetical protein VITISV_036400 [Vitis vinifera]   215   3e-54

>ref|NP_001234593.1| myo-inositol oxygenase [Solanum lycopersicum]
           gi|240248438|gb|ACS45396.1| myo-inositol oxygenase
           [Solanum lycopersicum]
          Length = 317

 Score =  217 bits (553), Expect = 7e-55
 Identities = 100/120 (83%), Positives = 105/120 (87%)
 Frame = +3

Query: 3   QIEHLLQTAEAIRRDYPSEGWLHLTALIHDLGKVLLHPSFGDQPQWCVVGDTFPLGCAFD 182
           QIEHLLQTAEAIR+DYP+E WLHLT LIHDLGKVLLHPSFG  PQW VVGDTFPLGCAFD
Sbjct: 125 QIEHLLQTAEAIRKDYPNEDWLHLTGLIHDLGKVLLHPSFGGLPQWAVVGDTFPLGCAFD 184

Query: 183 ESIVHCQYFKENPDFNNPTYNTKLGVYTENCGLGKVTMSWGHDEYMYLVAKENKTTLPPA 362
           ESIVH +YFKENPD NN  YNTK GVY E CGL KV MSWGHD+YMYL+AKENKTTLP A
Sbjct: 185 ESIVHHKYFKENPDINNNIYNTKNGVYEEGCGLDKVVMSWGHDDYMYLIAKENKTTLPSA 244


>ref|XP_002892814.1| myo-inisitol oxygenase [Arabidopsis lyrata subsp. lyrata]
           gi|297338656|gb|EFH69073.1| myo-inisitol oxygenase
           [Arabidopsis lyrata subsp. lyrata]
          Length = 311

 Score =  216 bits (550), Expect = 2e-54
 Identities = 97/120 (80%), Positives = 108/120 (90%)
 Frame = +3

Query: 3   QIEHLLQTAEAIRRDYPSEGWLHLTALIHDLGKVLLHPSFGDQPQWCVVGDTFPLGCAFD 182
           QIEHLLQTAEAIR+DYP E WLHLT LIHDLGKVLLHPSFG+ PQW VVGDTFP+GCAFD
Sbjct: 119 QIEHLLQTAEAIRKDYPDEDWLHLTGLIHDLGKVLLHPSFGELPQWAVVGDTFPVGCAFD 178

Query: 183 ESIVHCQYFKENPDFNNPTYNTKLGVYTENCGLGKVTMSWGHDEYMYLVAKENKTTLPPA 362
           ESIVH +YFKENPD++N +YNTK G+YTE+CGL  V MSWGHD+YMYLVAKEN+TTLP A
Sbjct: 179 ESIVHHKYFKENPDYDNLSYNTKYGIYTEDCGLDNVLMSWGHDDYMYLVAKENQTTLPSA 238


>ref|XP_002283119.1| PREDICTED: probable inositol oxygenase [Vitis vinifera]
           gi|297738724|emb|CBI27969.3| unnamed protein product
           [Vitis vinifera]
          Length = 309

 Score =  215 bits (548), Expect = 3e-54
 Identities = 96/120 (80%), Positives = 108/120 (90%)
 Frame = +3

Query: 3   QIEHLLQTAEAIRRDYPSEGWLHLTALIHDLGKVLLHPSFGDQPQWCVVGDTFPLGCAFD 182
           QIEHLLQTAEAIR+DYP+E WLHLT LIHDLGKVLLHPSFG+ PQW VVGDTFPLGCAFD
Sbjct: 117 QIEHLLQTAEAIRKDYPNEDWLHLTGLIHDLGKVLLHPSFGELPQWAVVGDTFPLGCAFD 176

Query: 183 ESIVHCQYFKENPDFNNPTYNTKLGVYTENCGLGKVTMSWGHDEYMYLVAKENKTTLPPA 362
           E+ VH +YFKENPD+NNP Y+TK G+Y+E CGL  V +SWGHD+YMYLVAKENK+TLPPA
Sbjct: 177 EANVHHKYFKENPDYNNPHYSTKNGIYSEGCGLDNVMISWGHDDYMYLVAKENKSTLPPA 236


>gb|ABK24160.1| unknown [Picea sitchensis]
          Length = 316

 Score =  215 bits (548), Expect = 3e-54
 Identities = 96/120 (80%), Positives = 106/120 (88%)
 Frame = +3

Query: 3   QIEHLLQTAEAIRRDYPSEGWLHLTALIHDLGKVLLHPSFGDQPQWCVVGDTFPLGCAFD 182
           QIEHLLQTAEAIR+DYP+E WLHLT LIHDLGKVLLHPSFG++PQW  VGDT+PLGCAFD
Sbjct: 124 QIEHLLQTAEAIRKDYPNEDWLHLTGLIHDLGKVLLHPSFGEEPQWAAVGDTYPLGCAFD 183

Query: 183 ESIVHCQYFKENPDFNNPTYNTKLGVYTENCGLGKVTMSWGHDEYMYLVAKENKTTLPPA 362
           ESIVH +YF ENPDF NP YNTK GVY+E CGL  V +SWGHDEYM++VAK NKTTLPPA
Sbjct: 184 ESIVHYEYFNENPDFYNPKYNTKYGVYSEKCGLENVIISWGHDEYMHMVAKMNKTTLPPA 243


>emb|CAN78063.1| hypothetical protein VITISV_036400 [Vitis vinifera]
          Length = 309

 Score =  215 bits (548), Expect = 3e-54
 Identities = 96/120 (80%), Positives = 108/120 (90%)
 Frame = +3

Query: 3   QIEHLLQTAEAIRRDYPSEGWLHLTALIHDLGKVLLHPSFGDQPQWCVVGDTFPLGCAFD 182
           QIEHLLQTAEAIR+DYP+E WLHLT LIHDLGKVLLHPSFG+ PQW VVGDTFPLGCAFD
Sbjct: 117 QIEHLLQTAEAIRKDYPNEDWLHLTGLIHDLGKVLLHPSFGELPQWAVVGDTFPLGCAFD 176

Query: 183 ESIVHCQYFKENPDFNNPTYNTKLGVYTENCGLGKVTMSWGHDEYMYLVAKENKTTLPPA 362
           E+ VH +YFKENPD+NNP Y+TK G+Y+E CGL  V +SWGHD+YMYLVAKENK+TLPPA
Sbjct: 177 EANVHHKYFKENPDYNNPHYSTKNGIYSEGCGLDNVMISWGHDDYMYLVAKENKSTLPPA 236


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