BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00045214
         (253 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004165422.1| PREDICTED: putative pentatricopeptide repeat...   107   1e-21
ref|XP_004141212.1| PREDICTED: putative pentatricopeptide repeat...   107   1e-21
ref|XP_003610566.1| Pentatricopeptide repeat-containing protein ...    96   2e-18
ref|XP_003593079.1| Pentatricopeptide repeat-containing protein ...    92   4e-17
ref|XP_003518279.1| PREDICTED: putative pentatricopeptide repeat...    91   1e-16

>ref|XP_004165422.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g37570-like [Cucumis sativus]
          Length = 427

 Score =  107 bits (266), Expect = 1e-21
 Identities = 51/83 (61%), Positives = 63/83 (75%)
 Frame = -3

Query: 251 LVGVISACTQIGDTDTSELITDDVEIDECDRSLVVSNALIHMHAKCGNIDRALREFNRMP 72
           LVG +SAC Q+GD + +  + D V+   CDR+L VSNALIH H+K GNI+RA  EFNRM 
Sbjct: 184 LVGALSACVQLGDVEMASKLIDQVDEGCCDRTLFVSNALIHKHSKFGNIERAQEEFNRMK 243

Query: 71  DRDVISYSALITALADHGRADEA 3
           DRDV++YS LI ALADHG+A EA
Sbjct: 244 DRDVVTYSTLIIALADHGKAKEA 266


>ref|XP_004141212.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g37570-like [Cucumis sativus]
          Length = 456

 Score =  107 bits (266), Expect = 1e-21
 Identities = 51/83 (61%), Positives = 63/83 (75%)
 Frame = -3

Query: 251 LVGVISACTQIGDTDTSELITDDVEIDECDRSLVVSNALIHMHAKCGNIDRALREFNRMP 72
           LVG +SAC Q+GD + +  + D V+   CDR+L VSNALIH H+K GNI+RA  EFNRM 
Sbjct: 213 LVGALSACVQLGDVEMASKLIDQVDEGCCDRTLFVSNALIHKHSKFGNIERAQEEFNRMK 272

Query: 71  DRDVISYSALITALADHGRADEA 3
           DRDV++YS LI ALADHG+A EA
Sbjct: 273 DRDVVTYSTLIIALADHGKAKEA 295


>ref|XP_003610566.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355511621|gb|AES92763.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 598

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 45/83 (54%), Positives = 62/83 (74%)
 Frame = -3

Query: 251 LVGVISACTQIGDTDTSELITDDVEIDECDRSLVVSNALIHMHAKCGNIDRALREFNRMP 72
           +VG ISAC Q+ D   S L+T D+E   C+++ +VSNALIHM +KCGNID A REFN M 
Sbjct: 313 MVGAISACAQLRDIRMSNLLTYDIEEGFCEKTHIVSNALIHMQSKCGNIDLAWREFNIMR 372

Query: 71  DRDVISYSALITALADHGRADEA 3
           +RD+ +YSA+I A A+HG++ +A
Sbjct: 373 NRDLYTYSAMIAAFAEHGKSQDA 395


>ref|XP_003593079.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|124360447|gb|ABN08457.1| Tetratricopeptide-like
           helical [Medicago truncatula]
           gi|355482127|gb|AES63330.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 558

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 43/83 (51%), Positives = 61/83 (73%)
 Frame = -3

Query: 251 LVGVISACTQIGDTDTSELITDDVEIDECDRSLVVSNALIHMHAKCGNIDRALREFNRMP 72
           +VG ISAC Q+ D   S  +T ++E   C+++ +VSNALIHM +KCGNID A REFN M 
Sbjct: 313 MVGAISACAQLRDIRMSNSLTYNIEEGFCEKTHIVSNALIHMQSKCGNIDLAWREFNIMR 372

Query: 71  DRDVISYSALITALADHGRADEA 3
           +RD+ +YSA+I A A+HG++ +A
Sbjct: 373 NRDLYTYSAMIAAFAEHGKSQDA 395


>ref|XP_003518279.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g37570-like [Glycine max]
          Length = 552

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 44/83 (53%), Positives = 58/83 (69%)
 Frame = -3

Query: 251 LVGVISACTQIGDTDTSELITDDVEIDECDRSLVVSNALIHMHAKCGNIDRALREFNRMP 72
           +VG ISAC Q+ D   S  +T  +E   CDR+ +VS ALIHMH+KCGNI+ AL EF  M 
Sbjct: 310 MVGAISACAQLRDIRMSNTLTGHLEEGCCDRTHIVSTALIHMHSKCGNINLALSEFTTMR 369

Query: 71  DRDVISYSALITALADHGRADEA 3
            RDV +YSA+I A A+HG++ +A
Sbjct: 370 YRDVYTYSAMIAAFAEHGKSQDA 392