BLASTX nr result
ID: Coptis25_contig00045177
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00045177 (241 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002312212.1| predicted protein [Populus trichocarpa] gi|2... 63 3e-08 ref|XP_002266137.1| PREDICTED: LOB domain-containing protein 6 [... 62 4e-08 ref|XP_002315100.1| predicted protein [Populus trichocarpa] gi|2... 62 6e-08 ref|XP_002514766.1| conserved hypothetical protein [Ricinus comm... 58 9e-07 ref|XP_003545810.1| PREDICTED: LOB domain-containing protein 6-l... 55 6e-06 >ref|XP_002312212.1| predicted protein [Populus trichocarpa] gi|222852032|gb|EEE89579.1| predicted protein [Populus trichocarpa] Length = 222 Score = 62.8 bits (151), Expect = 3e-08 Identities = 36/58 (62%), Positives = 42/58 (72%), Gaps = 2/58 (3%) Frame = -3 Query: 221 QFFSRDQQQALRSFDANGAYDTSFIAAINVSTNIGPLAQFQQQPRTAGGDDR--IGPS 54 QFF RDQQQ +RSFD+ YD S + A+NVS +IG L+QF QQPR A GDDR I PS Sbjct: 167 QFFPRDQQQMMRSFDSGNNYDASLL-AMNVSASIGQLSQF-QQPRAATGDDRRTIDPS 222 >ref|XP_002266137.1| PREDICTED: LOB domain-containing protein 6 [Vitis vinifera] gi|296080960|emb|CBI18626.3| unnamed protein product [Vitis vinifera] Length = 216 Score = 62.4 bits (150), Expect = 4e-08 Identities = 35/58 (60%), Positives = 42/58 (72%), Gaps = 2/58 (3%) Frame = -3 Query: 221 QFFSRDQQQALRSFDANGAYDTSFIAAINVSTNIGPLAQFQQQPRTAGGDDR--IGPS 54 QFF R+QQQ +R+FDA YD S + A+NVS +IG L+QF QPR AGGDDR I PS Sbjct: 161 QFFPREQQQMIRTFDATNNYDASLL-AMNVSASIGQLSQF-HQPRAAGGDDRRSIDPS 216 >ref|XP_002315100.1| predicted protein [Populus trichocarpa] gi|222864140|gb|EEF01271.1| predicted protein [Populus trichocarpa] Length = 220 Score = 61.6 bits (148), Expect = 6e-08 Identities = 35/58 (60%), Positives = 41/58 (70%), Gaps = 2/58 (3%) Frame = -3 Query: 221 QFFSRDQQQALRSFDANGAYDTSFIAAINVSTNIGPLAQFQQQPRTAGGDDR--IGPS 54 QFF +DQQQ +RSFDA YD S + A+NVS +IG L+ F QQPR A GDDR I PS Sbjct: 165 QFFPKDQQQMMRSFDAGNNYDASLL-AMNVSASIGQLSHF-QQPRAAAGDDRRTIDPS 220 >ref|XP_002514766.1| conserved hypothetical protein [Ricinus communis] gi|223545817|gb|EEF47320.1| conserved hypothetical protein [Ricinus communis] Length = 218 Score = 57.8 bits (138), Expect = 9e-07 Identities = 33/54 (61%), Positives = 39/54 (72%), Gaps = 2/54 (3%) Frame = -3 Query: 221 QFFSRDQQQALRSFDANGA--YDTSFIAAINVSTNIGPLAQFQQQPRTAGGDDR 66 QFF RDQQQ +RSFD A YD S +A +NVS +IG L+QF QQPR A G+DR Sbjct: 160 QFFPRDQQQMMRSFDTAAANTYDASLLA-MNVSASIGQLSQF-QQPRAAAGEDR 211 >ref|XP_003545810.1| PREDICTED: LOB domain-containing protein 6-like [Glycine max] Length = 212 Score = 55.1 bits (131), Expect = 6e-06 Identities = 29/55 (52%), Positives = 36/55 (65%), Gaps = 3/55 (5%) Frame = -3 Query: 221 QFFSRDQ---QQALRSFDANGAYDTSFIAAINVSTNIGPLAQFQQQPRTAGGDDR 66 QFF RDQ QQ ++SFDA YD S +A +N+S ++G L Q Q Q T GGDDR Sbjct: 156 QFFPRDQHQQQQVVKSFDAGNNYDASLLA-MNISASLGQLNQLQHQSATGGGDDR 209