BLASTX nr result

ID: Coptis25_contig00045177 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00045177
         (241 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002312212.1| predicted protein [Populus trichocarpa] gi|2...    63   3e-08
ref|XP_002266137.1| PREDICTED: LOB domain-containing protein 6 [...    62   4e-08
ref|XP_002315100.1| predicted protein [Populus trichocarpa] gi|2...    62   6e-08
ref|XP_002514766.1| conserved hypothetical protein [Ricinus comm...    58   9e-07
ref|XP_003545810.1| PREDICTED: LOB domain-containing protein 6-l...    55   6e-06

>ref|XP_002312212.1| predicted protein [Populus trichocarpa] gi|222852032|gb|EEE89579.1|
           predicted protein [Populus trichocarpa]
          Length = 222

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 36/58 (62%), Positives = 42/58 (72%), Gaps = 2/58 (3%)
 Frame = -3

Query: 221 QFFSRDQQQALRSFDANGAYDTSFIAAINVSTNIGPLAQFQQQPRTAGGDDR--IGPS 54
           QFF RDQQQ +RSFD+   YD S + A+NVS +IG L+QF QQPR A GDDR  I PS
Sbjct: 167 QFFPRDQQQMMRSFDSGNNYDASLL-AMNVSASIGQLSQF-QQPRAATGDDRRTIDPS 222


>ref|XP_002266137.1| PREDICTED: LOB domain-containing protein 6 [Vitis vinifera]
           gi|296080960|emb|CBI18626.3| unnamed protein product
           [Vitis vinifera]
          Length = 216

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 35/58 (60%), Positives = 42/58 (72%), Gaps = 2/58 (3%)
 Frame = -3

Query: 221 QFFSRDQQQALRSFDANGAYDTSFIAAINVSTNIGPLAQFQQQPRTAGGDDR--IGPS 54
           QFF R+QQQ +R+FDA   YD S + A+NVS +IG L+QF  QPR AGGDDR  I PS
Sbjct: 161 QFFPREQQQMIRTFDATNNYDASLL-AMNVSASIGQLSQF-HQPRAAGGDDRRSIDPS 216


>ref|XP_002315100.1| predicted protein [Populus trichocarpa] gi|222864140|gb|EEF01271.1|
           predicted protein [Populus trichocarpa]
          Length = 220

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 35/58 (60%), Positives = 41/58 (70%), Gaps = 2/58 (3%)
 Frame = -3

Query: 221 QFFSRDQQQALRSFDANGAYDTSFIAAINVSTNIGPLAQFQQQPRTAGGDDR--IGPS 54
           QFF +DQQQ +RSFDA   YD S + A+NVS +IG L+ F QQPR A GDDR  I PS
Sbjct: 165 QFFPKDQQQMMRSFDAGNNYDASLL-AMNVSASIGQLSHF-QQPRAAAGDDRRTIDPS 220


>ref|XP_002514766.1| conserved hypothetical protein [Ricinus communis]
           gi|223545817|gb|EEF47320.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 218

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 33/54 (61%), Positives = 39/54 (72%), Gaps = 2/54 (3%)
 Frame = -3

Query: 221 QFFSRDQQQALRSFDANGA--YDTSFIAAINVSTNIGPLAQFQQQPRTAGGDDR 66
           QFF RDQQQ +RSFD   A  YD S +A +NVS +IG L+QF QQPR A G+DR
Sbjct: 160 QFFPRDQQQMMRSFDTAAANTYDASLLA-MNVSASIGQLSQF-QQPRAAAGEDR 211


>ref|XP_003545810.1| PREDICTED: LOB domain-containing protein 6-like [Glycine max]
          Length = 212

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 29/55 (52%), Positives = 36/55 (65%), Gaps = 3/55 (5%)
 Frame = -3

Query: 221 QFFSRDQ---QQALRSFDANGAYDTSFIAAINVSTNIGPLAQFQQQPRTAGGDDR 66
           QFF RDQ   QQ ++SFDA   YD S +A +N+S ++G L Q Q Q  T GGDDR
Sbjct: 156 QFFPRDQHQQQQVVKSFDAGNNYDASLLA-MNISASLGQLNQLQHQSATGGGDDR 209


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