BLASTX nr result

ID: Coptis25_contig00045174 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00045174
         (255 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266097.2| PREDICTED: uncharacterized glycosyltransfera...    79   5e-13
emb|CBI27390.3| unnamed protein product [Vitis vinifera]               79   5e-13
ref|XP_002315018.1| predicted protein [Populus trichocarpa] gi|2...    72   5e-11
emb|CAN72290.1| hypothetical protein VITISV_007350 [Vitis vinifera]    71   8e-11
ref|XP_002512125.1| glycosyltransferase, putative [Ricinus commu...    70   2e-10

>ref|XP_002266097.2| PREDICTED: uncharacterized glycosyltransferase AER61-like [Vitis
           vinifera]
          Length = 389

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 36/62 (58%), Positives = 45/62 (72%)
 Frame = -3

Query: 187 SQAIKCDRTHNRYDICFLNGSTVLDPIISTLFLVEPTVSKPQMLKVRPYPRKWENDIMSM 8
           ++ I CDR+H RYD+C +N +TVL+P  ST FLVEPT  +  M KVRPYPRKWE  +M  
Sbjct: 2   AKQISCDRSHQRYDMCTVNATTVLEPTTSTFFLVEPT--QALMEKVRPYPRKWETSVMGR 59

Query: 7   IK 2
           IK
Sbjct: 60  IK 61


>emb|CBI27390.3| unnamed protein product [Vitis vinifera]
          Length = 354

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 36/62 (58%), Positives = 45/62 (72%)
 Frame = -3

Query: 187 SQAIKCDRTHNRYDICFLNGSTVLDPIISTLFLVEPTVSKPQMLKVRPYPRKWENDIMSM 8
           ++ I CDR+H RYD+C +N +TVL+P  ST FLVEPT  +  M KVRPYPRKWE  +M  
Sbjct: 2   AKQISCDRSHQRYDMCTVNATTVLEPTTSTFFLVEPT--QALMEKVRPYPRKWETSVMGR 59

Query: 7   IK 2
           IK
Sbjct: 60  IK 61


>ref|XP_002315018.1| predicted protein [Populus trichocarpa] gi|222864058|gb|EEF01189.1|
           predicted protein [Populus trichocarpa]
          Length = 386

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 33/59 (55%), Positives = 43/59 (72%)
 Frame = -3

Query: 178 IKCDRTHNRYDICFLNGSTVLDPIISTLFLVEPTVSKPQMLKVRPYPRKWENDIMSMIK 2
           I CDR+H  YD+C +NG TVLDP+ STL+L  PT +   + K+RPYPRKWE  IM+ I+
Sbjct: 1   INCDRSHRFYDLCTINGPTVLDPVNSTLYLSVPT-NSTTVEKIRPYPRKWEKPIMAGIQ 58


>emb|CAN72290.1| hypothetical protein VITISV_007350 [Vitis vinifera]
          Length = 515

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 33/62 (53%), Positives = 42/62 (67%)
 Frame = -3

Query: 187 SQAIKCDRTHNRYDICFLNGSTVLDPIISTLFLVEPTVSKPQMLKVRPYPRKWENDIMSM 8
           ++ I CDR+  RYD C +N +TVL+P   T FLVEPT +  +  KVRPYPRKWE  +M  
Sbjct: 38  AKQISCDRSXQRYDXCTVNATTVLEPTTXTFFLVEPTQALVE--KVRPYPRKWETSVMGR 95

Query: 7   IK 2
           IK
Sbjct: 96  IK 97


>ref|XP_002512125.1| glycosyltransferase, putative [Ricinus communis]
           gi|223549305|gb|EEF50794.1| glycosyltransferase,
           putative [Ricinus communis]
          Length = 390

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 35/72 (48%), Positives = 45/72 (62%), Gaps = 7/72 (9%)
 Frame = -3

Query: 196 QVSSQA--IKCDRTHNRYDICFLNGSTVLDPIISTLFLVEPTVSKP-----QMLKVRPYP 38
           Q S QA  I CDR++  YD+C ++G T LDP +ST +LV+P    P      M K+RPYP
Sbjct: 68  QASPQARKINCDRSNKAYDLCTIHGPTFLDPTVSTFYLVDPQSQGPSPPLHSMEKIRPYP 127

Query: 37  RKWENDIMSMIK 2
           RKWE   M+ IK
Sbjct: 128 RKWETVTMNRIK 139


Top