BLASTX nr result

ID: Coptis25_contig00045171 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00045171
         (341 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004161919.1| PREDICTED: E3 ubiquitin-protein ligase RING1...    60   2e-07
ref|XP_004147682.1| PREDICTED: E3 ubiquitin-protein ligase RING1...    60   2e-07
ref|XP_003569088.1| PREDICTED: E3 ubiquitin-protein ligase RING1...    59   4e-07
ref|XP_003518387.1| PREDICTED: E3 ubiquitin-protein ligase RING1...    59   5e-07
ref|XP_003545254.1| PREDICTED: E3 ubiquitin-protein ligase RING1...    58   7e-07

>ref|XP_004161919.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis sativus]
          Length = 380

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 23/37 (62%), Positives = 28/37 (75%)
 Frame = -2

Query: 340 EPFELATKALLLDCGHLHHCKCILPWLSLNRSCPVCR 230
           E FEL T+A  + C H++HC CILPWLS+  SCPVCR
Sbjct: 190 EAFELGTEAREMPCKHIYHCDCILPWLSIRNSCPVCR 226


>ref|XP_004147682.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis sativus]
          Length = 383

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 23/37 (62%), Positives = 28/37 (75%)
 Frame = -2

Query: 340 EPFELATKALLLDCGHLHHCKCILPWLSLNRSCPVCR 230
           E FEL T+A  + C H++HC CILPWLS+  SCPVCR
Sbjct: 193 EAFELGTEAREMPCKHIYHCDCILPWLSIRNSCPVCR 229


>ref|XP_003569088.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Brachypodium
           distachyon]
          Length = 415

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 23/37 (62%), Positives = 28/37 (75%)
 Frame = -2

Query: 340 EPFELATKALLLDCGHLHHCKCILPWLSLNRSCPVCR 230
           EPFEL  +A  + CGH++H  CILPWL+L  SCPVCR
Sbjct: 224 EPFELGAEAREMPCGHMYHQDCILPWLALRNSCPVCR 260


>ref|XP_003518387.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Glycine max]
          Length = 391

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 22/37 (59%), Positives = 29/37 (78%)
 Frame = -2

Query: 340 EPFELATKALLLDCGHLHHCKCILPWLSLNRSCPVCR 230
           EPFEL+T A  + C H++H +CILPWL++  SCPVCR
Sbjct: 193 EPFELSTMAKEMPCKHIYHAECILPWLAIKNSCPVCR 229


>ref|XP_003545254.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Glycine max]
          Length = 382

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 22/37 (59%), Positives = 28/37 (75%)
 Frame = -2

Query: 340 EPFELATKALLLDCGHLHHCKCILPWLSLNRSCPVCR 230
           EPFEL T A  + C H++H +CILPWL++  SCPVCR
Sbjct: 192 EPFELCTMAKEMPCKHIYHAECILPWLAIKNSCPVCR 228


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