BLASTX nr result
ID: Coptis25_contig00045151
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00045151 (221 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vu... 60 2e-07 gb|AAR13295.1| retrovirus-related pol polyprotein [Phaseolus vul... 57 1e-06 >gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vulgaris] Length = 867 Score = 60.1 bits (144), Expect = 2e-07 Identities = 37/80 (46%), Positives = 48/80 (60%), Gaps = 10/80 (12%) Frame = -1 Query: 212 KKKGKANVEASFAS-GSEVE-DVSLCVSTSQYYMVDRWILDSGCSYHMCPNRK*FAFYES 39 +KK K +A+ A S+VE D+SL VS S +D WILDSGC+YHMCP R F ++ Sbjct: 188 QKKEKVLQDANVAECKSDVESDISLIVSLSASLYLDEWILDSGCTYHMCPIRDWFFEFQE 247 Query: 38 ID--------DHAYKTVGIG 3 +D D+ KTVGIG Sbjct: 248 LDGGVVYMGNDNPCKTVGIG 267 >gb|AAR13295.1| retrovirus-related pol polyprotein [Phaseolus vulgaris] Length = 324 Score = 57.4 bits (137), Expect = 1e-06 Identities = 36/80 (45%), Positives = 46/80 (57%), Gaps = 10/80 (12%) Frame = -1 Query: 212 KKKGKANVEASFAS-GSEVE-DVSLCVSTSQYYMVDRWILDSGCSYHMCPNRK*FAFYES 39 +KK K +A+ A S+VE D+SL VS S D WILDSGC+YHMCP R F ++ Sbjct: 227 QKKEKVPQDANVAECKSDVESDISLIVSLSASSYPDEWILDSGCTYHMCPIRDWFFEFQE 286 Query: 38 ID--------DHAYKTVGIG 3 +D D+ KT GIG Sbjct: 287 LDGGVVYMGNDNPCKTAGIG 306