BLASTX nr result

ID: Coptis25_contig00045131 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00045131
         (265 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN79625.1| hypothetical protein VITISV_035899 [Vitis vinifera]    61   8e-08

>emb|CAN79625.1| hypothetical protein VITISV_035899 [Vitis vinifera]
          Length = 866

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 27/66 (40%), Positives = 43/66 (65%)
 Frame = +1

Query: 43  LISSNFLKDSKETGEIYALVIKGNNKTNETVNPKIQTMLEEFKDLVPEDLPSILPPMRNI 222
           + S +F K  K+   + ALV+KG ++    +  K+Q +L +F DL P +LP+ LPPMRNI
Sbjct: 188 ITSLDFFKQVKDPNFVVALVVKGQSEATINIPTKVQEVLADFPDLSPNELPNELPPMRNI 247

Query: 223 QHNLSV 240
           QH++ +
Sbjct: 248 QHHIDL 253


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