BLASTX nr result
ID: Coptis25_contig00045126
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00045126 (300 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002870202.1| binding protein [Arabidopsis lyrata subsp. l... 125 5e-27 ref|XP_003547378.1| PREDICTED: condensin-2 complex subunit D3-li... 124 8e-27 ref|XP_003533347.1| PREDICTED: condensin-2 complex subunit D3-li... 124 8e-27 emb|CAA72043.1| hypothetical protein [Arabidopsis thaliana] 123 1e-26 ref|NP_193324.1| condensin-2 complex subunit D3 [Arabidopsis tha... 123 1e-26 >ref|XP_002870202.1| binding protein [Arabidopsis lyrata subsp. lyrata] gi|297316038|gb|EFH46461.1| binding protein [Arabidopsis lyrata subsp. lyrata] Length = 1315 Score = 125 bits (313), Expect = 5e-27 Identities = 62/77 (80%), Positives = 66/77 (85%) Frame = -1 Query: 300 QTFILLSKLLQRDYVKWRGXXXXXXXXXLVDESKKIRQLADFLFGNILKAKAPLLAYNSF 121 QTFILLS+LLQRDYVKWRG LVDES+KIRQLADFLFG+ILK KAPLLAYNSF Sbjct: 939 QTFILLSRLLQRDYVKWRGVLFLRFLLSLVDESEKIRQLADFLFGSILKVKAPLLAYNSF 998 Query: 120 VEAIFVLNDCHAHAGHS 70 VEAI+VLNDCHAH GHS Sbjct: 999 VEAIYVLNDCHAHTGHS 1015 >ref|XP_003547378.1| PREDICTED: condensin-2 complex subunit D3-like [Glycine max] Length = 1324 Score = 124 bits (311), Expect = 8e-27 Identities = 61/78 (78%), Positives = 65/78 (83%) Frame = -1 Query: 300 QTFILLSKLLQRDYVKWRGXXXXXXXXXLVDESKKIRQLADFLFGNILKAKAPLLAYNSF 121 QTFILLS+LLQRDYVKWRG LVDES+KIRQLADFLFGNILK K+PLLAYNSF Sbjct: 943 QTFILLSRLLQRDYVKWRGVLFLRFLLSLVDESEKIRQLADFLFGNILKVKSPLLAYNSF 1002 Query: 120 VEAIFVLNDCHAHAGHSE 67 VEA+FVLNDCH H GH E Sbjct: 1003 VEAVFVLNDCHVHNGHRE 1020 >ref|XP_003533347.1| PREDICTED: condensin-2 complex subunit D3-like [Glycine max] Length = 1334 Score = 124 bits (311), Expect = 8e-27 Identities = 61/78 (78%), Positives = 65/78 (83%) Frame = -1 Query: 300 QTFILLSKLLQRDYVKWRGXXXXXXXXXLVDESKKIRQLADFLFGNILKAKAPLLAYNSF 121 QTFILLS+LLQRDYVKWRG LVDES+KIRQLADFLFGNILK K+PLLAYNSF Sbjct: 953 QTFILLSRLLQRDYVKWRGVLFLRFLLSLVDESEKIRQLADFLFGNILKVKSPLLAYNSF 1012 Query: 120 VEAIFVLNDCHAHAGHSE 67 VEA+FVLNDCH H GH E Sbjct: 1013 VEAVFVLNDCHVHNGHRE 1030 >emb|CAA72043.1| hypothetical protein [Arabidopsis thaliana] Length = 672 Score = 123 bits (309), Expect = 1e-26 Identities = 61/77 (79%), Positives = 66/77 (85%) Frame = -1 Query: 300 QTFILLSKLLQRDYVKWRGXXXXXXXXXLVDESKKIRQLADFLFGNILKAKAPLLAYNSF 121 QTFILLS+LLQRDYVKWRG LVDES+KIR+LADFLFG+ILK KAPLLAYNSF Sbjct: 313 QTFILLSRLLQRDYVKWRGVLFLRFLLSLVDESEKIRRLADFLFGSILKVKAPLLAYNSF 372 Query: 120 VEAIFVLNDCHAHAGHS 70 VEAI+VLNDCHAH GHS Sbjct: 373 VEAIYVLNDCHAHTGHS 389 >ref|NP_193324.1| condensin-2 complex subunit D3 [Arabidopsis thaliana] gi|5281022|emb|CAB45995.1| hypothetical protein [Arabidopsis thaliana] gi|7268337|emb|CAB78631.1| hypothetical protein [Arabidopsis thaliana] gi|332658263|gb|AEE83663.1| condensin-2 complex subunit D3 [Arabidopsis thaliana] Length = 1314 Score = 123 bits (309), Expect = 1e-26 Identities = 61/77 (79%), Positives = 66/77 (85%) Frame = -1 Query: 300 QTFILLSKLLQRDYVKWRGXXXXXXXXXLVDESKKIRQLADFLFGNILKAKAPLLAYNSF 121 QTFILLS+LLQRDYVKWRG LVDES+KIR+LADFLFG+ILK KAPLLAYNSF Sbjct: 940 QTFILLSRLLQRDYVKWRGVLFLRFLLSLVDESEKIRRLADFLFGSILKVKAPLLAYNSF 999 Query: 120 VEAIFVLNDCHAHAGHS 70 VEAI+VLNDCHAH GHS Sbjct: 1000 VEAIYVLNDCHAHTGHS 1016