BLASTX nr result
ID: Coptis25_contig00045120
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00045120 (278 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002438569.1| hypothetical protein SORBIDRAFT_10g022040 [S... 60 1e-07 ref|XP_002464697.1| hypothetical protein SORBIDRAFT_01g023851 [S... 59 4e-07 ref|XP_002436935.1| hypothetical protein SORBIDRAFT_10g011631 [S... 58 9e-07 ref|XP_002300602.1| predicted protein [Populus trichocarpa] gi|2... 58 9e-07 ref|XP_002467234.1| hypothetical protein SORBIDRAFT_01g021750 [S... 57 1e-06 >ref|XP_002438569.1| hypothetical protein SORBIDRAFT_10g022040 [Sorghum bicolor] gi|241916792|gb|EER89936.1| hypothetical protein SORBIDRAFT_10g022040 [Sorghum bicolor] Length = 1088 Score = 60.5 bits (145), Expect = 1e-07 Identities = 29/74 (39%), Positives = 44/74 (59%) Frame = -1 Query: 224 MPDSDVLWICVGDLNEIMSKDEK*GR*PVDHSEIQSFLEVVEQCQLFDMVYRGSGFTWCN 45 M + D+ IC+GD+N IM+ EK G P + I +F +V+ C FD+ Y G +TW N Sbjct: 130 MSNQDLPVICMGDMNNIMNVTEKLGPRPANQRLISNFCCLVKDCGFFDLGYHGPAYTWSN 189 Query: 44 GQYSIGRVHKRLDR 3 ++S ++RLDR Sbjct: 190 KRFSSFPTYERLDR 203 >ref|XP_002464697.1| hypothetical protein SORBIDRAFT_01g023851 [Sorghum bicolor] gi|241918551|gb|EER91695.1| hypothetical protein SORBIDRAFT_01g023851 [Sorghum bicolor] Length = 527 Score = 58.9 bits (141), Expect = 4e-07 Identities = 28/72 (38%), Positives = 42/72 (58%) Frame = -1 Query: 218 DSDVLWICVGDLNEIMSKDEK*GR*PVDHSEIQSFLEVVEQCQLFDMVYRGSGFTWCNGQ 39 +S++ +C+GDLNE+M +EK G D + I F V+QC D+ Y G +TW N + Sbjct: 177 NSNLPMLCMGDLNELMHANEKLGPNSADVNRIHEFCAYVKQCGFIDLGYSGPAYTWTNKR 236 Query: 38 YSIGRVHKRLDR 3 +S +RLDR Sbjct: 237 FSSTPTFERLDR 248 >ref|XP_002436935.1| hypothetical protein SORBIDRAFT_10g011631 [Sorghum bicolor] gi|241915158|gb|EER88302.1| hypothetical protein SORBIDRAFT_10g011631 [Sorghum bicolor] Length = 873 Score = 57.8 bits (138), Expect = 9e-07 Identities = 27/62 (43%), Positives = 38/62 (61%) Frame = -1 Query: 188 DLNEIMSKDEK*GR*PVDHSEIQSFLEVVEQCQLFDMVYRGSGFTWCNGQYSIGRVHKRL 9 DLNE+M +EK G P D + I +F V+QC L D+ Y G +TW N ++S ++RL Sbjct: 105 DLNELMHSNEKFGPTPADVNRINNFCASVKQCGLIDLGYNGPAYTWTNKRFSFVPTYERL 164 Query: 8 DR 3 DR Sbjct: 165 DR 166 >ref|XP_002300602.1| predicted protein [Populus trichocarpa] gi|222842328|gb|EEE79875.1| predicted protein [Populus trichocarpa] Length = 366 Score = 57.8 bits (138), Expect = 9e-07 Identities = 27/67 (40%), Positives = 40/67 (59%) Frame = -1 Query: 203 WICVGDLNEIMSKDEK*GR*PVDHSEIQSFLEVVEQCQLFDMVYRGSGFTWCNGQYSIGR 24 W+C+GD N+++ +EK GR +S Q F E VE C+L DM G FTW G+ + Sbjct: 117 WVCMGDYNDMLCAEEKRGRVLHPNSSFQGFREAVEDCKLTDMPLIGYPFTWERGRGTAEW 176 Query: 23 VHKRLDR 3 + +R+DR Sbjct: 177 IQERIDR 183 >ref|XP_002467234.1| hypothetical protein SORBIDRAFT_01g021750 [Sorghum bicolor] gi|241921088|gb|EER94232.1| hypothetical protein SORBIDRAFT_01g021750 [Sorghum bicolor] Length = 426 Score = 57.4 bits (137), Expect = 1e-06 Identities = 28/65 (43%), Positives = 37/65 (56%) Frame = -1 Query: 197 CVGDLNEIMSKDEK*GR*PVDHSEIQSFLEVVEQCQLFDMVYRGSGFTWCNGQYSIGRVH 18 C+GDLN IM DEK G D I SF + V++C D+ Y G +TW N ++S Sbjct: 139 CMGDLNNIMHPDEKSGPGRPDLRRINSFCDSVKECGFIDLGYSGPAYTWTNKRFSTTPTF 198 Query: 17 KRLDR 3 +RLDR Sbjct: 199 ERLDR 203