BLASTX nr result

ID: Coptis25_contig00045120 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00045120
         (278 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002438569.1| hypothetical protein SORBIDRAFT_10g022040 [S...    60   1e-07
ref|XP_002464697.1| hypothetical protein SORBIDRAFT_01g023851 [S...    59   4e-07
ref|XP_002436935.1| hypothetical protein SORBIDRAFT_10g011631 [S...    58   9e-07
ref|XP_002300602.1| predicted protein [Populus trichocarpa] gi|2...    58   9e-07
ref|XP_002467234.1| hypothetical protein SORBIDRAFT_01g021750 [S...    57   1e-06

>ref|XP_002438569.1| hypothetical protein SORBIDRAFT_10g022040 [Sorghum bicolor]
           gi|241916792|gb|EER89936.1| hypothetical protein
           SORBIDRAFT_10g022040 [Sorghum bicolor]
          Length = 1088

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 29/74 (39%), Positives = 44/74 (59%)
 Frame = -1

Query: 224 MPDSDVLWICVGDLNEIMSKDEK*GR*PVDHSEIQSFLEVVEQCQLFDMVYRGSGFTWCN 45
           M + D+  IC+GD+N IM+  EK G  P +   I +F  +V+ C  FD+ Y G  +TW N
Sbjct: 130 MSNQDLPVICMGDMNNIMNVTEKLGPRPANQRLISNFCCLVKDCGFFDLGYHGPAYTWSN 189

Query: 44  GQYSIGRVHKRLDR 3
            ++S    ++RLDR
Sbjct: 190 KRFSSFPTYERLDR 203


>ref|XP_002464697.1| hypothetical protein SORBIDRAFT_01g023851 [Sorghum bicolor]
           gi|241918551|gb|EER91695.1| hypothetical protein
           SORBIDRAFT_01g023851 [Sorghum bicolor]
          Length = 527

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 28/72 (38%), Positives = 42/72 (58%)
 Frame = -1

Query: 218 DSDVLWICVGDLNEIMSKDEK*GR*PVDHSEIQSFLEVVEQCQLFDMVYRGSGFTWCNGQ 39
           +S++  +C+GDLNE+M  +EK G    D + I  F   V+QC   D+ Y G  +TW N +
Sbjct: 177 NSNLPMLCMGDLNELMHANEKLGPNSADVNRIHEFCAYVKQCGFIDLGYSGPAYTWTNKR 236

Query: 38  YSIGRVHKRLDR 3
           +S     +RLDR
Sbjct: 237 FSSTPTFERLDR 248


>ref|XP_002436935.1| hypothetical protein SORBIDRAFT_10g011631 [Sorghum bicolor]
           gi|241915158|gb|EER88302.1| hypothetical protein
           SORBIDRAFT_10g011631 [Sorghum bicolor]
          Length = 873

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 27/62 (43%), Positives = 38/62 (61%)
 Frame = -1

Query: 188 DLNEIMSKDEK*GR*PVDHSEIQSFLEVVEQCQLFDMVYRGSGFTWCNGQYSIGRVHKRL 9
           DLNE+M  +EK G  P D + I +F   V+QC L D+ Y G  +TW N ++S    ++RL
Sbjct: 105 DLNELMHSNEKFGPTPADVNRINNFCASVKQCGLIDLGYNGPAYTWTNKRFSFVPTYERL 164

Query: 8   DR 3
           DR
Sbjct: 165 DR 166


>ref|XP_002300602.1| predicted protein [Populus trichocarpa] gi|222842328|gb|EEE79875.1|
           predicted protein [Populus trichocarpa]
          Length = 366

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 27/67 (40%), Positives = 40/67 (59%)
 Frame = -1

Query: 203 WICVGDLNEIMSKDEK*GR*PVDHSEIQSFLEVVEQCQLFDMVYRGSGFTWCNGQYSIGR 24
           W+C+GD N+++  +EK GR    +S  Q F E VE C+L DM   G  FTW  G+ +   
Sbjct: 117 WVCMGDYNDMLCAEEKRGRVLHPNSSFQGFREAVEDCKLTDMPLIGYPFTWERGRGTAEW 176

Query: 23  VHKRLDR 3
           + +R+DR
Sbjct: 177 IQERIDR 183


>ref|XP_002467234.1| hypothetical protein SORBIDRAFT_01g021750 [Sorghum bicolor]
           gi|241921088|gb|EER94232.1| hypothetical protein
           SORBIDRAFT_01g021750 [Sorghum bicolor]
          Length = 426

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 28/65 (43%), Positives = 37/65 (56%)
 Frame = -1

Query: 197 CVGDLNEIMSKDEK*GR*PVDHSEIQSFLEVVEQCQLFDMVYRGSGFTWCNGQYSIGRVH 18
           C+GDLN IM  DEK G    D   I SF + V++C   D+ Y G  +TW N ++S     
Sbjct: 139 CMGDLNNIMHPDEKSGPGRPDLRRINSFCDSVKECGFIDLGYSGPAYTWTNKRFSTTPTF 198

Query: 17  KRLDR 3
           +RLDR
Sbjct: 199 ERLDR 203


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