BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00045118
         (223 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI39619.3| unnamed protein product [Vitis vinifera]              120   1e-25
ref|XP_002277347.1| PREDICTED: pentatricopeptide repeat-containi...   120   1e-25
ref|XP_003553071.1| PREDICTED: pentatricopeptide repeat-containi...   116   2e-24
ref|XP_004157209.1| PREDICTED: pentatricopeptide repeat-containi...   111   5e-23
ref|XP_004140822.1| PREDICTED: pentatricopeptide repeat-containi...   111   5e-23

>emb|CBI39619.3| unnamed protein product [Vitis vinifera]
          Length = 640

 Score =  120 bits (301), Expect = 1e-25
 Identities = 53/74 (71%), Positives = 65/74 (87%)
 Frame = -1

Query: 223 QPGNDGFHVLLSNVYASKGRWDEVIEIRDIMKHQGVVKTPGCSLIEINGVVHEFLAGDST 44
           QP +DGFHVLLSN++ASKG W++V+E+R +MK QGVVKTPGCSLIE NGVVHEFLAGD T
Sbjct: 467 QPDHDGFHVLLSNIFASKGDWEDVLEVRGMMKQQGVVKTPGCSLIEANGVVHEFLAGDKT 526

Query: 43  HPRLKEIENMLDEM 2
           HP + ++E ML+EM
Sbjct: 527 HPWINKVEGMLNEM 540


>ref|XP_002277347.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Vitis vinifera]
          Length = 808

 Score =  120 bits (301), Expect = 1e-25
 Identities = 53/74 (71%), Positives = 65/74 (87%)
 Frame = -1

Query: 223 QPGNDGFHVLLSNVYASKGRWDEVIEIRDIMKHQGVVKTPGCSLIEINGVVHEFLAGDST 44
           QP +DGFHVLLSN++ASKG W++V+E+R +MK QGVVKTPGCSLIE NGVVHEFLAGD T
Sbjct: 635 QPDHDGFHVLLSNIFASKGDWEDVLEVRGMMKQQGVVKTPGCSLIEANGVVHEFLAGDKT 694

Query: 43  HPRLKEIENMLDEM 2
           HP + ++E ML+EM
Sbjct: 695 HPWINKVEGMLNEM 708


>ref|XP_003553071.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Glycine max]
          Length = 775

 Score =  116 bits (291), Expect = 2e-24
 Identities = 52/72 (72%), Positives = 60/72 (83%)
 Frame = -1

Query: 223 QPGNDGFHVLLSNVYASKGRWDEVIEIRDIMKHQGVVKTPGCSLIEINGVVHEFLAGDST 44
           QP +DGFHVLLSN+YASKG W  V+EIR IM   GVVKTPGCS+IE NG VHEFLAGD T
Sbjct: 602 QPDHDGFHVLLSNIYASKGNWGNVLEIRGIMAQHGVVKTPGCSMIEANGTVHEFLAGDKT 661

Query: 43  HPRLKEIENMLD 8
           HP++ +IE+MLD
Sbjct: 662 HPQINDIEHMLD 673


>ref|XP_004157209.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 953

 Score =  111 bits (278), Expect = 5e-23
 Identities = 50/74 (67%), Positives = 61/74 (82%)
 Frame = -1

Query: 223 QPGNDGFHVLLSNVYASKGRWDEVIEIRDIMKHQGVVKTPGCSLIEINGVVHEFLAGDST 44
           QP +DGFHVLLSN+YASKG+WD+V+EIR +M    V+K PGCS+IE NGV+HEFLAGD T
Sbjct: 707 QPDHDGFHVLLSNIYASKGKWDDVLEIRGMMTKHRVLKIPGCSMIEANGVIHEFLAGDKT 766

Query: 43  HPRLKEIENMLDEM 2
           HP +  IE+ML EM
Sbjct: 767 HPDMDAIEDMLVEM 780


>ref|XP_004140822.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 809

 Score =  111 bits (278), Expect = 5e-23
 Identities = 50/74 (67%), Positives = 61/74 (82%)
 Frame = -1

Query: 223 QPGNDGFHVLLSNVYASKGRWDEVIEIRDIMKHQGVVKTPGCSLIEINGVVHEFLAGDST 44
           QP +DGFHVLLSN+YASKG+WD+V+EIR +M    V+K PGCS+IE NGV+HEFLAGD T
Sbjct: 572 QPDHDGFHVLLSNIYASKGKWDDVLEIRGMMTKHRVLKIPGCSMIEANGVIHEFLAGDKT 631

Query: 43  HPRLKEIENMLDEM 2
           HP +  IE+ML EM
Sbjct: 632 HPDMDAIEDMLVEM 645