BLASTX nr result

ID: Coptis25_contig00045106 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00045106
         (321 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269539.2| PREDICTED: ABC transporter B family member 1...    87   1e-15
ref|XP_002321339.1| multidrug/pheromone exporter, MDR family, AB...    82   4e-14
ref|XP_004173886.1| PREDICTED: ABC transporter B family member 1...    80   2e-13
ref|XP_004151914.1| PREDICTED: ABC transporter B family member 1...    80   2e-13
ref|XP_004169290.1| PREDICTED: LOW QUALITY PROTEIN: ABC transpor...    79   4e-13

>ref|XP_002269539.2| PREDICTED: ABC transporter B family member 19-like [Vitis vinifera]
          Length = 1252

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 48/84 (57%), Positives = 58/84 (69%)
 Frame = -2

Query: 320  EATSALDTESERMVMDALSSFEQNNSGWSCRTTQITVAHRLSTIMKSDTIXXXXXXXXXX 141
            EATSALDT+SER V+ AL S + NN+G   RTTQITVAHRLST++ SDTI          
Sbjct: 1166 EATSALDTQSERAVVSALESTKLNNNGDLSRTTQITVAHRLSTVINSDTIIVMDKGEIVE 1225

Query: 140  XGSHSTLLESSEGIYSRFFHLQSL 69
             G HSTL+  S+G+YS+   LQSL
Sbjct: 1226 MGPHSTLIAVSDGLYSKLVQLQSL 1249


>ref|XP_002321339.1| multidrug/pheromone exporter, MDR family, ABC transporter family
            [Populus trichocarpa] gi|222868335|gb|EEF05466.1|
            multidrug/pheromone exporter, MDR family, ABC transporter
            family [Populus trichocarpa]
          Length = 1275

 Score = 82.4 bits (202), Expect = 4e-14
 Identities = 45/86 (52%), Positives = 58/86 (67%), Gaps = 1/86 (1%)
 Frame = -2

Query: 320  EATSALDTESERMVMDALSSFEQN-NSGWSCRTTQITVAHRLSTIMKSDTIXXXXXXXXX 144
            EATSALDTE+ER ++ AL S + N N G    TTQITVAHR+ST+  SDTI         
Sbjct: 1188 EATSALDTETERSIVSALGSVKLNDNRGSGYTTTQITVAHRISTVKNSDTIAVMDKGEIV 1247

Query: 143  XXGSHSTLLESSEGIYSRFFHLQSLV 66
              GSHS L+ +S+G+YSR + LQ+L+
Sbjct: 1248 QMGSHSALIATSDGLYSRLYQLQNLI 1273



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 37/94 (39%), Positives = 54/94 (57%)
 Frame = -2

Query: 320 EATSALDTESERMVMDALSSFEQNNSGWSCRTTQITVAHRLSTIMKSDTIXXXXXXXXXX 141
           EATSALD+ESE++V DAL    Q         T I +AHR+STI+ +D I          
Sbjct: 545 EATSALDSESEKLVQDALEKAMQGR-------TVILIAHRMSTIINADMIAIVENGQVIE 597

Query: 140 XGSHSTLLESSEGIYSRFFHLQSLVPS*VTCNNT 39
            G+H +LLE+S+ +Y + F +Q++     T NN+
Sbjct: 598 TGTHRSLLETSK-VYGKLFSMQNI----STANNS 626


>ref|XP_004173886.1| PREDICTED: ABC transporter B family member 10-like, partial
           [Cucumis sativus]
          Length = 487

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 45/85 (52%), Positives = 55/85 (64%)
 Frame = -2

Query: 320 EATSALDTESERMVMDALSSFEQNNSGWSCRTTQITVAHRLSTIMKSDTIXXXXXXXXXX 141
           E TSALD ESER+++ AL S   NN     RTTQITVAHRLST+  SD I          
Sbjct: 404 EPTSALDIESERILVRALESINGNNGS---RTTQITVAHRLSTVSNSDVIVVMDRGEVVE 460

Query: 140 XGSHSTLLESSEGIYSRFFHLQSLV 66
            GSH+TLL + +G+YS+ F +QSLV
Sbjct: 461 IGSHATLLTTPDGVYSKLFRIQSLV 485


>ref|XP_004151914.1| PREDICTED: ABC transporter B family member 19-like [Cucumis sativus]
          Length = 1244

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 45/85 (52%), Positives = 55/85 (64%)
 Frame = -2

Query: 320  EATSALDTESERMVMDALSSFEQNNSGWSCRTTQITVAHRLSTIMKSDTIXXXXXXXXXX 141
            E TSALD ESER+++ AL S   NN     RTTQITVAHRLST+  SD I          
Sbjct: 1161 EPTSALDIESERILVRALESINGNNGS---RTTQITVAHRLSTVSNSDVIVVMDRGEVVE 1217

Query: 140  XGSHSTLLESSEGIYSRFFHLQSLV 66
             GSH+TLL + +G+YS+ F +QSLV
Sbjct: 1218 IGSHATLLTTPDGVYSKLFRIQSLV 1242


>ref|XP_004169290.1| PREDICTED: LOW QUALITY PROTEIN: ABC transporter B family member
            19-like [Cucumis sativus]
          Length = 1229

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 45/84 (53%), Positives = 53/84 (63%)
 Frame = -2

Query: 320  EATSALDTESERMVMDALSSFEQNNSGWSCRTTQITVAHRLSTIMKSDTIXXXXXXXXXX 141
            E TSALD ESER ++ AL S   NN     RTTQITVAHRLST+  SD I          
Sbjct: 1146 EPTSALDVESERTLVSALESINGNNG---FRTTQITVAHRLSTVTNSDVIVVMDRGEIVE 1202

Query: 140  XGSHSTLLESSEGIYSRFFHLQSL 69
             GSHSTLL + +G+YS+ F +QSL
Sbjct: 1203 IGSHSTLLTAPDGVYSKLFRIQSL 1226


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