BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00045102
         (242 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI36977.3| unnamed protein product [Vitis vinifera]               77   1e-12
ref|XP_002883307.1| hypothetical protein ARALYDRAFT_318888 [Arab...    67   1e-09
ref|XP_002515711.1| pentatricopeptide repeat-containing protein,...    67   1e-09
ref|NP_187008.1| pentatricopeptide repeat-containing protein [Ar...    65   6e-09
ref|XP_003521943.1| PREDICTED: pentatricopeptide repeat-containi...    64   1e-08

>emb|CBI36977.3| unnamed protein product [Vitis vinifera]
          Length = 372

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 40/80 (50%), Positives = 54/80 (67%)
 Frame = -3

Query: 240 VITSVSSNTFHVLLLPLLHAQVICLAFNLSVFVGSALITSYEKWGCEKSLRGVFDEIPVK 61
           +I+++    F+VL  P +HA V+ L FN SVFVGSAL+  Y   G   +L  VFDEI +K
Sbjct: 124 MISAILDTVFNVLT-PQIHAVVVSLGFNSSVFVGSALMRGYAHVGDRVALGRVFDEISIK 182

Query: 60  DVTSWNALITGYMNLGFVEE 1
           +V SWNAL+ GYM+LG  +E
Sbjct: 183 NVASWNALVLGYMDLGDTDE 202


>ref|XP_002883307.1| hypothetical protein ARALYDRAFT_318888 [Arabidopsis lyrata subsp.
           lyrata] gi|297329147|gb|EFH59566.1| hypothetical protein
           ARALYDRAFT_318888 [Arabidopsis lyrata subsp. lyrata]
          Length = 523

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 33/65 (50%), Positives = 43/65 (66%)
 Frame = -3

Query: 207 VLLLPLLHAQVICLAFNLSVFVGSALITSYEKWGCEKSLRGVFDEIPVKDVTSWNALITG 28
           V+L  LLH++ I       V VGS+LI+ Y KWGC  S R VFDE+P ++V +WNA+I G
Sbjct: 62  VVLGKLLHSESIKFGVCSDVMVGSSLISMYGKWGCVVSARKVFDEMPERNVATWNAMIGG 121

Query: 27  YMNLG 13
           YM  G
Sbjct: 122 YMGNG 126


>ref|XP_002515711.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223545148|gb|EEF46658.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 462

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 27/59 (45%), Positives = 42/59 (71%)
 Frame = -3

Query: 189 LHAQVICLAFNLSVFVGSALITSYEKWGCEKSLRGVFDEIPVKDVTSWNALITGYMNLG 13
           +H +V+   FNL ++VG++L+  Y K+G  K  R VFD +PV+D+TSWN +I+GY+  G
Sbjct: 165 VHCEVVITGFNLDIYVGNSLLAMYSKFGNMKMARMVFDRMPVRDLTSWNTMISGYLKNG 223


>ref|NP_187008.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75207453|sp|Q9SS60.1|PP210_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At3g03580 gi|6091764|gb|AAF03474.1|AC009327_13
           hypothetical protein [Arabidopsis thaliana]
           gi|28393735|gb|AAO42278.1| unknown protein [Arabidopsis
           thaliana] gi|29824355|gb|AAP04138.1| unknown protein
           [Arabidopsis thaliana] gi|332640438|gb|AEE73959.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 882

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 28/64 (43%), Positives = 44/64 (68%)
 Frame = -3

Query: 192 LLHAQVICLAFNLSVFVGSALITSYEKWGCEKSLRGVFDEIPVKDVTSWNALITGYMNLG 13
           L++ Q++ + F   +FVG+AL+  Y + G     R VFDE+PV+D+ SWN+LI+GY + G
Sbjct: 127 LVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHG 186

Query: 12  FVEE 1
           + EE
Sbjct: 187 YYEE 190


>ref|XP_003521943.1| PREDICTED: pentatricopeptide repeat-containing protein At4g32430,
           mitochondrial-like [Glycine max]
          Length = 895

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 27/59 (45%), Positives = 38/59 (64%)
 Frame = -3

Query: 189 LHAQVICLAFNLSVFVGSALITSYEKWGCEKSLRGVFDEIPVKDVTSWNALITGYMNLG 13
           LH+ V+       VF+G+AL+T Y +WG     R VFDE+P +D+ SWNA+I+GY   G
Sbjct: 197 LHSLVVKCGLGCEVFIGNALVTMYSRWGMLDEARRVFDEMPERDLVSWNAMISGYAQEG 255