BLASTX nr result

ID: Coptis25_contig00045100 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00045100
         (371 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282438.1| PREDICTED: uncharacterized protein LOC100267...    87   1e-15
ref|XP_002320406.1| predicted protein [Populus trichocarpa] gi|2...    73   2e-11
gb|ABK95152.1| unknown [Populus trichocarpa]                           73   2e-11
ref|XP_003519559.1| PREDICTED: uncharacterized protein LOC100785...    58   9e-07
gb|AFK39376.1| unknown [Lotus japonicus]                               57   2e-06

>ref|XP_002282438.1| PREDICTED: uncharacterized protein LOC100267696 [Vitis vinifera]
           gi|302143482|emb|CBI22043.3| unnamed protein product
           [Vitis vinifera]
          Length = 259

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 57/127 (44%), Positives = 75/127 (59%), Gaps = 4/127 (3%)
 Frame = +3

Query: 3   DNRTLFARQGSISQACFMRQVSIKENFGQCNSVQHGVPPCSSGYINKDSSVPGAPLFSKP 182
           DNRT FARQGS SQ CFMRQVS +    Q +S Q G+P   S Y N+ S+    PLFSKP
Sbjct: 45  DNRTYFARQGSSSQGCFMRQVSTE----QGSSPQPGMPLKCSAYSNESSNTSQTPLFSKP 100

Query: 183 AHMKPEPGIV-QYRPVKQECQLSMEEPPKFARPYRRLLDRPKEVISKKV---KPDGTELS 350
           A ++P    V   +P+ Q+  L+  EP KFARP +R+    +    KK+   + +G E S
Sbjct: 101 ARVEPNLSYVGSIQPLPQDFNLA-TEPAKFARPSQRVSGSKQFRSKKKIHASEGNGIEWS 159

Query: 351 PSWDVSE 371
           P  DV+E
Sbjct: 160 PRMDVAE 166


>ref|XP_002320406.1| predicted protein [Populus trichocarpa] gi|222861179|gb|EEE98721.1|
           predicted protein [Populus trichocarpa]
          Length = 266

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 52/129 (40%), Positives = 68/129 (52%), Gaps = 6/129 (4%)
 Frame = +3

Query: 3   DNRTLFARQGSISQACFMR-QVSIKENFGQCNSVQHGVPPCSSGYINKDSSVPGAPLFSK 179
           DNR  FARQGS SQACFMR Q    E   Q ++       C++  I  +     APLFS+
Sbjct: 48  DNRMYFARQGSASQACFMRIQQGSSEKGLQSSASSETEWSCNAELIKDE-----APLFSR 102

Query: 180 PAHMKPE-PGIVQYRPVKQECQLSMEEPPKFARPYRRLLDRPKEV-ISKKV---KPDGTE 344
           P  MKP  P +       + CQ +M   PKFARP RR ++R  ++   KK+   + +G E
Sbjct: 103 PTKMKPNLPNVEPTLTPAKYCQSTMSALPKFARPNRRTINRNGQLQFEKKIYSSESNGIE 162

Query: 345 LSPSWDVSE 371
            SP  DV E
Sbjct: 163 RSPKMDVVE 171


>gb|ABK95152.1| unknown [Populus trichocarpa]
          Length = 267

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 50/128 (39%), Positives = 66/128 (51%), Gaps = 5/128 (3%)
 Frame = +3

Query: 3   DNRTLFARQGSISQACFMRQVSIKENFGQCNSVQHGVPPCSSGYINKDSSVPGAPLFSKP 182
           DNR  FARQGS SQACFMR   I++       +Q      +    N +     APLFS+P
Sbjct: 48  DNRMYFARQGSASQACFMR---IQQQGSSEKGLQSSASSETEWSCNAELIKDEAPLFSRP 104

Query: 183 AHMKPE-PGIVQYRPVKQECQLSMEEPPKFARPYRRLLDRPKEV-ISKKV---KPDGTEL 347
             MKP  P +       + CQ +M   PKFARP RR ++R  ++   KK+   + +G E 
Sbjct: 105 TKMKPNLPNVEPTLTPAKYCQSTMSALPKFARPNRRTINRNGQLQFEKKIYSSESNGIER 164

Query: 348 SPSWDVSE 371
           SP  DV E
Sbjct: 165 SPKMDVVE 172


>ref|XP_003519559.1| PREDICTED: uncharacterized protein LOC100785395 [Glycine max]
          Length = 261

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 45/129 (34%), Positives = 63/129 (48%), Gaps = 6/129 (4%)
 Frame = +3

Query: 3   DNRTLFARQGSISQACFMRQVSIKENFGQCNSVQHGVPPCSSGYINKDSSVPGAPLFSKP 182
           DN+  FARQ S S   FMRQ SI+E  G    +     P ++   ++  S   AP F+KP
Sbjct: 45  DNKVYFARQASASLGYFMRQTSIEEG-GSTGFIAPKTHPGAAA--SEGPSNARAPCFAKP 101

Query: 183 AHMKP--EPGIVQYRPVKQECQLSMEEPPKFARPYRRL----LDRPKEVISKKVKPDGTE 344
           A  +      +VQ    +Q C  S  +PP FARP R++    L   K+    ++   G E
Sbjct: 102 ARAESVFTNSVVQPMAQEQGCDFSTLDPPTFARPSRQIRGDKLHSEKKACYSEI--GGIE 159

Query: 345 LSPSWDVSE 371
            SP  DV+E
Sbjct: 160 WSPRMDVAE 168


>gb|AFK39376.1| unknown [Lotus japonicus]
          Length = 253

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 46/125 (36%), Positives = 61/125 (48%), Gaps = 2/125 (1%)
 Frame = +3

Query: 3   DNRTLFARQGSISQACFMRQVSIKENFGQCNSVQHGVPPCSSGYINKDSSVPGAPLFSKP 182
           DN+  FARQ S S   FMRQ S+KE  G   +    + P   G  ++  S P AP F++P
Sbjct: 45  DNKVYFARQASASFGYFMRQASVKE--GDSTTF---IAPKIHGGKSEGPSNPRAPCFARP 99

Query: 183 AHMKPEPGIVQYRPVKQECQLSMEEPPKFARPYRRLLDRPKEVISK-KVKPD-GTELSPS 356
           A  +P   +       Q    S  EPPKF+RP +++  R +    K    PD GT  SP 
Sbjct: 100 ARTEPMTKV-------QGGDSSSIEPPKFSRPSKQIGQRNQLNYKKNSCHPDTGTVWSPR 152

Query: 357 WDVSE 371
            DV E
Sbjct: 153 MDVVE 157


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