BLASTX nr result

ID: Coptis25_contig00045087 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00045087
         (516 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI40350.3| unnamed protein product [Vitis vinifera]              256   2e-66
ref|XP_002273844.1| PREDICTED: UPF0187 protein At3g61320, chloro...   256   2e-66
ref|XP_002511848.1| conserved hypothetical protein [Ricinus comm...   236   1e-60
ref|XP_002320128.1| predicted protein [Populus trichocarpa] gi|2...   231   5e-59
ref|NP_191691.2| Bestrophin-like protein [Arabidopsis thaliana] ...   223   2e-56

>emb|CBI40350.3| unnamed protein product [Vitis vinifera]
          Length = 339

 Score =  256 bits (653), Expect = 2e-66
 Identities = 127/172 (73%), Positives = 145/172 (84%)
 Frame = -1

Query: 516 ATYNSAALWHWLPDSFLLLRTSSLPYQLTAPALALLLVFRTEASYSRFEEGRKAWTKLIA 337
           A+YNSA  +HWLP+ F LLR SSLPYQLTAPALALLLVFRTEASYSRFEEGRKAWTK+IA
Sbjct: 53  ASYNSAVTFHWLPEFFPLLRASSLPYQLTAPALALLLVFRTEASYSRFEEGRKAWTKIIA 112

Query: 336 GTSDFARQVIGSVDTQNHAVLKKALLQYIMAFPVALKCHVIYGADIAQXXXXXXXXXXLA 157
           GT+DFARQV+  V++   A+LKKALLQYIMAFPVALKCHVIYG+DI Q          LA
Sbjct: 113 GTNDFARQVVAGVESSGDALLKKALLQYIMAFPVALKCHVIYGSDIRQDLQNLLEVDDLA 172

Query: 156 IVLDSKDRPRCIIEFISQSLQMLPLEDSKRDLLESKFTCFHEGIAICEQLIG 1
           +VL SK RPRCIIEFISQSLQ+L L+D+KR +LESK +CFHEGI +CEQL+G
Sbjct: 173 VVLSSKHRPRCIIEFISQSLQLLNLDDAKRHVLESKLSCFHEGIGVCEQLMG 224


>ref|XP_002273844.1| PREDICTED: UPF0187 protein At3g61320, chloroplastic [Vitis
           vinifera]
          Length = 419

 Score =  256 bits (653), Expect = 2e-66
 Identities = 127/172 (73%), Positives = 145/172 (84%)
 Frame = -1

Query: 516 ATYNSAALWHWLPDSFLLLRTSSLPYQLTAPALALLLVFRTEASYSRFEEGRKAWTKLIA 337
           A+YNSA  +HWLP+ F LLR SSLPYQLTAPALALLLVFRTEASYSRFEEGRKAWTK+IA
Sbjct: 133 ASYNSAVTFHWLPEFFPLLRASSLPYQLTAPALALLLVFRTEASYSRFEEGRKAWTKIIA 192

Query: 336 GTSDFARQVIGSVDTQNHAVLKKALLQYIMAFPVALKCHVIYGADIAQXXXXXXXXXXLA 157
           GT+DFARQV+  V++   A+LKKALLQYIMAFPVALKCHVIYG+DI Q          LA
Sbjct: 193 GTNDFARQVVAGVESSGDALLKKALLQYIMAFPVALKCHVIYGSDIRQDLQNLLEVDDLA 252

Query: 156 IVLDSKDRPRCIIEFISQSLQMLPLEDSKRDLLESKFTCFHEGIAICEQLIG 1
           +VL SK RPRCIIEFISQSLQ+L L+D+KR +LESK +CFHEGI +CEQL+G
Sbjct: 253 VVLSSKHRPRCIIEFISQSLQLLNLDDAKRHVLESKLSCFHEGIGVCEQLMG 304


>ref|XP_002511848.1| conserved hypothetical protein [Ricinus communis]
           gi|223549028|gb|EEF50517.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 417

 Score =  236 bits (602), Expect = 1e-60
 Identities = 119/172 (69%), Positives = 140/172 (81%)
 Frame = -1

Query: 516 ATYNSAALWHWLPDSFLLLRTSSLPYQLTAPALALLLVFRTEASYSRFEEGRKAWTKLIA 337
           A+YNSA   H+ P  F +LR SSLPYQLTAPALALLLVFRTEASYSR+EEGRKAWTK+I+
Sbjct: 138 ASYNSAVEMHFFPGFFPVLRASSLPYQLTAPALALLLVFRTEASYSRYEEGRKAWTKVIS 197

Query: 336 GTSDFARQVIGSVDTQNHAVLKKALLQYIMAFPVALKCHVIYGADIAQXXXXXXXXXXLA 157
           G +DFARQVI +VD    AVLK ALLQY++AFPVALKCHVIYG+DI +          LA
Sbjct: 198 GVNDFARQVIATVDNSKDAVLKNALLQYVIAFPVALKCHVIYGSDINRDLRNLLEVDDLA 257

Query: 156 IVLDSKDRPRCIIEFISQSLQMLPLEDSKRDLLESKFTCFHEGIAICEQLIG 1
           ++L+S+ RPRCIIEFISQSLQ+L LE+SKR LLESK +C HEGI +CEQL+G
Sbjct: 258 MLLNSRHRPRCIIEFISQSLQLLNLEESKRHLLESKISCLHEGIGVCEQLMG 309


>ref|XP_002320128.1| predicted protein [Populus trichocarpa] gi|222860901|gb|EEE98443.1|
           predicted protein [Populus trichocarpa]
          Length = 348

 Score =  231 bits (589), Expect = 5e-59
 Identities = 116/172 (67%), Positives = 139/172 (80%)
 Frame = -1

Query: 516 ATYNSAALWHWLPDSFLLLRTSSLPYQLTAPALALLLVFRTEASYSRFEEGRKAWTKLIA 337
           A+YNSA   H+LP  F +LRTSSLPYQLTAPALALLLVFRTEASYSRFE+G+ AWTK+I+
Sbjct: 72  ASYNSAVEMHFLPGFFPVLRTSSLPYQLTAPALALLLVFRTEASYSRFEDGKTAWTKVIS 131

Query: 336 GTSDFARQVIGSVDTQNHAVLKKALLQYIMAFPVALKCHVIYGADIAQXXXXXXXXXXLA 157
           GT+DFARQVI  VD  +++ LK  LL+YIMAFP+ALKCHV YG++I Q          LA
Sbjct: 132 GTNDFARQVISGVDGSSNSALKSELLRYIMAFPIALKCHVTYGSNIGQDLQNLLEAGDLA 191

Query: 156 IVLDSKDRPRCIIEFISQSLQMLPLEDSKRDLLESKFTCFHEGIAICEQLIG 1
           IVL S+ RPRCIIEFISQ LQ+L L++S R+LLESK +CFHEGI +CEQL+G
Sbjct: 192 IVLKSRHRPRCIIEFISQCLQLLNLDESMRNLLESKISCFHEGIGVCEQLMG 243


>ref|NP_191691.2| Bestrophin-like protein [Arabidopsis thaliana]
           gi|20141056|sp|Q9M2D2.2|YU88_ARATH RecName: Full=UPF0187
           protein At3g61320, chloroplastic; Flags: Precursor
           gi|16604549|gb|AAL24280.1| AT3g61320/T20K12_220
           [Arabidopsis thaliana] gi|23296291|gb|AAN12915.1|
           At3g61320/T20K12_220 [Arabidopsis thaliana]
           gi|332646666|gb|AEE80187.1| Bestrophin-like protein
           [Arabidopsis thaliana]
          Length = 410

 Score =  223 bits (567), Expect = 2e-56
 Identities = 113/173 (65%), Positives = 137/173 (79%), Gaps = 1/173 (0%)
 Frame = -1

Query: 516 ATYNSAALWHWLPDSFLLLRTSSLPYQLTAPALALLLVFRTEASYSRFEEGRKAWTKLIA 337
           A+YNSA    WLP  F +LR+SSLPYQLTAPALALLLVFRTEASYSR+EEGRKAW  +IA
Sbjct: 130 ASYNSAVALDWLPGIFPILRSSSLPYQLTAPALALLLVFRTEASYSRYEEGRKAWVGIIA 189

Query: 336 GTSDFARQVIGSVDTQ-NHAVLKKALLQYIMAFPVALKCHVIYGADIAQXXXXXXXXXXL 160
           GT+D ARQVI SVD+  +  ++K  LL+YI AFPVALKCHVIYG+DIA+          L
Sbjct: 190 GTNDLARQVICSVDSSGDELIIKDLLLRYIAAFPVALKCHVIYGSDIARDLRNLIEADDL 249

Query: 159 AIVLDSKDRPRCIIEFISQSLQMLPLEDSKRDLLESKFTCFHEGIAICEQLIG 1
           +++L +K RPRC+IEFISQS+Q+L L+D+KRDLLESK    HEGI +CEQL+G
Sbjct: 250 SLILQAKHRPRCVIEFISQSIQLLKLDDAKRDLLESKMLHLHEGIGVCEQLMG 302


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