BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00045084
         (259 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004169636.1| PREDICTED: pentatricopeptide repeat-containi...   127   1e-27
ref|XP_004146494.1| PREDICTED: pentatricopeptide repeat-containi...   127   1e-27
ref|XP_002268784.1| PREDICTED: pentatricopeptide repeat-containi...   125   4e-27
ref|XP_003524199.1| PREDICTED: pentatricopeptide repeat-containi...   122   2e-26
ref|XP_002327681.1| predicted protein [Populus trichocarpa] gi|2...   114   8e-24

>ref|XP_004169636.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g44230-like [Cucumis sativus]
          Length = 650

 Score =  127 bits (318), Expect = 1e-27
 Identities = 58/84 (69%), Positives = 74/84 (88%)
 Frame = -3

Query: 254 ISACALLGAGKHAKWIRDLAEKDGLSPSTNVVVGSAMIDMYSKCGSVDEAYQIFKSTKEK 75
           ISACA LGA KHA WIRD+AE+ G  PS NVVVGSA+IDMYSKCGS DEAY++F+  KE+
Sbjct: 282 ISACAQLGAVKHANWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKER 341

Query: 74  NVYSYSAMIVGFAIHGKANAALEL 3
           NV+SYS+MI+G+A+HG+A++AL+L
Sbjct: 342 NVFSYSSMILGYAMHGRAHSALQL 365


>ref|XP_004146494.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g44230-like [Cucumis sativus]
          Length = 650

 Score =  127 bits (318), Expect = 1e-27
 Identities = 58/84 (69%), Positives = 74/84 (88%)
 Frame = -3

Query: 254 ISACALLGAGKHAKWIRDLAEKDGLSPSTNVVVGSAMIDMYSKCGSVDEAYQIFKSTKEK 75
           ISACA LGA KHA WIRD+AE+ G  PS NVVVGSA+IDMYSKCGS DEAY++F+  KE+
Sbjct: 282 ISACAQLGAVKHANWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKER 341

Query: 74  NVYSYSAMIVGFAIHGKANAALEL 3
           NV+SYS+MI+G+A+HG+A++AL+L
Sbjct: 342 NVFSYSSMILGYAMHGRAHSALQL 365


>ref|XP_002268784.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g44230-like [Vitis vinifera]
          Length = 647

 Score =  125 bits (314), Expect = 4e-27
 Identities = 56/84 (66%), Positives = 74/84 (88%)
 Frame = -3

Query: 254 ISACALLGAGKHAKWIRDLAEKDGLSPSTNVVVGSAMIDMYSKCGSVDEAYQIFKSTKEK 75
           ISACA LGA K+A W+RD+AE+ G  P++NVVVGSA+IDMY+KCGSV++AY++F+  +E+
Sbjct: 279 ISACAQLGAAKYANWVRDVAEQSGFGPTSNVVVGSALIDMYAKCGSVEDAYKVFERMEER 338

Query: 74  NVYSYSAMIVGFAIHGKANAALEL 3
           NVYSYS+MIVGFA+HG A AA+EL
Sbjct: 339 NVYSYSSMIVGFAMHGLAGAAMEL 362


>ref|XP_003524199.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g44230-like [Glycine max]
          Length = 617

 Score =  122 bits (307), Expect = 2e-26
 Identities = 56/84 (66%), Positives = 70/84 (83%)
 Frame = -3

Query: 254 ISACALLGAGKHAKWIRDLAEKDGLSPSTNVVVGSAMIDMYSKCGSVDEAYQIFKSTKEK 75
           ISACA LGA K+A WIRD+AE  G     NV+VGSA+IDMYSKCG+V+EAY +FK  +E+
Sbjct: 249 ISACAQLGASKYANWIRDIAESSGFGVGDNVLVGSALIDMYSKCGNVEEAYDVFKGMRER 308

Query: 74  NVYSYSAMIVGFAIHGKANAALEL 3
           NV+SYS+MIVGFAIHG+A AA++L
Sbjct: 309 NVFSYSSMIVGFAIHGRARAAIKL 332


>ref|XP_002327681.1| predicted protein [Populus trichocarpa] gi|222836766|gb|EEE75159.1|
           predicted protein [Populus trichocarpa]
          Length = 654

 Score =  114 bits (285), Expect = 8e-24
 Identities = 53/84 (63%), Positives = 69/84 (82%)
 Frame = -3

Query: 254 ISACALLGAGKHAKWIRDLAEKDGLSPSTNVVVGSAMIDMYSKCGSVDEAYQIFKSTKEK 75
           ISACA LGA K+A WIRD+AEK       +VVVGSA+IDMYSKCGSV +AY++F+  KE+
Sbjct: 286 ISACAQLGAAKYADWIRDVAEKSEFGGKHSVVVGSALIDMYSKCGSVGDAYRVFQGMKER 345

Query: 74  NVYSYSAMIVGFAIHGKANAALEL 3
           NVYSYS+MI+GFA+HG+ + A++L
Sbjct: 346 NVYSYSSMILGFAMHGRVHDAMKL 369