BLASTX nr result

ID: Coptis25_contig00045073 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00045073
         (215 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269779.2| PREDICTED: putative disease resistance prote...    78   8e-13
ref|XP_003633531.1| PREDICTED: putative disease resistance prote...    77   1e-12
emb|CBI28588.3| unnamed protein product [Vitis vinifera]               71   8e-11
ref|XP_002271553.1| PREDICTED: putative disease resistance RPP13...    71   8e-11
emb|CAN69703.1| hypothetical protein VITISV_018147 [Vitis vinifera]    71   8e-11

>ref|XP_002269779.2| PREDICTED: putative disease resistance protein RGA3-like [Vitis
           vinifera]
          Length = 1091

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 40/71 (56%), Positives = 49/71 (69%)
 Frame = -2

Query: 214 WNILQAPLRVGAPGSKILITTRSQIVSKIMMTSHVISLQGLADDDCWSLFKKSAFRNTNP 35
           W+ L+ PLR GA GSKI++TTRS  VS +M T     L+GL+DDDCWSLFK+ AF N N 
Sbjct: 276 WDRLRLPLRAGATGSKIIVTTRSGRVSSVMGTMPPRHLEGLSDDDCWSLFKQIAFENRNA 335

Query: 34  DDITPNLLSIG 2
            D  P L+ IG
Sbjct: 336 -DAHPELVRIG 345


>ref|XP_003633531.1| PREDICTED: putative disease resistance protein RGA3-like [Vitis
           vinifera]
          Length = 961

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 40/71 (56%), Positives = 49/71 (69%)
 Frame = -2

Query: 214 WNILQAPLRVGAPGSKILITTRSQIVSKIMMTSHVISLQGLADDDCWSLFKKSAFRNTNP 35
           W+ L+ PLR GA GSKI++TTRS  VS +M T     L+GL+DDDCWSLFK+ AF N N 
Sbjct: 183 WDRLRLPLRAGATGSKIIVTTRSGRVSSVMGTMPPRHLEGLSDDDCWSLFKQIAFENGNA 242

Query: 34  DDITPNLLSIG 2
            D  P L+ IG
Sbjct: 243 -DAHPELVRIG 252


>emb|CBI28588.3| unnamed protein product [Vitis vinifera]
          Length = 1092

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 37/68 (54%), Positives = 47/68 (69%), Gaps = 1/68 (1%)
 Frame = -2

Query: 214 WNILQAPLRVGAPGSKILITTRSQIVSKIM-MTSHVISLQGLADDDCWSLFKKSAFRNTN 38
           W+IL++P   GA GSKI+ITTRS+ V+ IM  T H+  L  L++DDCWSLF K AF+N  
Sbjct: 236 WDILRSPFEAGAKGSKIIITTRSEAVAMIMGRTVHLFRLGVLSEDDCWSLFAKHAFKNRK 295

Query: 37  PDDITPNL 14
            D   PNL
Sbjct: 296 MDQ-HPNL 302


>ref|XP_002271553.1| PREDICTED: putative disease resistance RPP13-like protein 1-like
           [Vitis vinifera]
          Length = 1247

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 37/68 (54%), Positives = 47/68 (69%), Gaps = 1/68 (1%)
 Frame = -2

Query: 214 WNILQAPLRVGAPGSKILITTRSQIVSKIM-MTSHVISLQGLADDDCWSLFKKSAFRNTN 38
           W+IL++P   GA GSKI+ITTRS+ V+ IM  T H+  L  L++DDCWSLF K AF+N  
Sbjct: 189 WDILRSPFEAGAKGSKIIITTRSEAVAMIMGRTVHLFRLGVLSEDDCWSLFAKHAFKNRK 248

Query: 37  PDDITPNL 14
            D   PNL
Sbjct: 249 MDQ-HPNL 255


>emb|CAN69703.1| hypothetical protein VITISV_018147 [Vitis vinifera]
          Length = 1361

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 36/71 (50%), Positives = 48/71 (67%)
 Frame = -2

Query: 214 WNILQAPLRVGAPGSKILITTRSQIVSKIMMTSHVISLQGLADDDCWSLFKKSAFRNTNP 35
           W+ LQAPL+ GA GS I++TTR++ V+ IM T+    L+ L+D+ CWSLF   AF+N  P
Sbjct: 302 WSTLQAPLKAGAQGSVIIVTTRNEKVASIMRTAASYPLRELSDEHCWSLFSHCAFKNITP 361

Query: 34  DDITPNLLSIG 2
           D I  NL  IG
Sbjct: 362 DAI-KNLEPIG 371


Top