BLASTX nr result

ID: Coptis25_contig00045021 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00045021
         (273 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002325457.1| predicted protein [Populus trichocarpa] gi|2...   157   6e-37
ref|NP_190126.1| exostosin family protein [Arabidopsis thaliana]...   156   2e-36
ref|XP_002875730.1| exostosin family protein [Arabidopsis lyrata...   155   2e-36
ref|XP_003517832.1| PREDICTED: xylogalacturonan beta-1,3-xylosyl...   154   9e-36
emb|CBI31205.3| unnamed protein product [Vitis vinifera]              153   1e-35

>ref|XP_002325457.1| predicted protein [Populus trichocarpa] gi|222862332|gb|EEE99838.1|
           predicted protein [Populus trichocarpa]
          Length = 463

 Score =  157 bits (398), Expect = 6e-37
 Identities = 71/85 (83%), Positives = 80/85 (94%)
 Frame = -2

Query: 272 KRSGGRDHVVMAHHPNSMLDARVKLWPAMFILSDFGRYPPTVANVEKDVIAPYKHVIRTF 93
           KRSGGRDHV++AHHPNSMLDARVKLWPA+FIL+DFGRYPP +ANV KDVIAPYKHVIR++
Sbjct: 196 KRSGGRDHVLLAHHPNSMLDARVKLWPAIFILADFGRYPPNIANVAKDVIAPYKHVIRSY 255

Query: 92  VHDLSGFEDRPTLLYFQGAIYRKDG 18
           V+D S F+ RPTLLYFQGAIYRKDG
Sbjct: 256 VNDSSNFDSRPTLLYFQGAIYRKDG 280


>ref|NP_190126.1| exostosin family protein [Arabidopsis thaliana]
           gi|6967106|emb|CAB72489.1| putative protein [Arabidopsis
           thaliana] gi|332644505|gb|AEE78026.1| exostosin family
           protein [Arabidopsis thaliana]
          Length = 475

 Score =  156 bits (394), Expect = 2e-36
 Identities = 73/85 (85%), Positives = 79/85 (92%)
 Frame = -2

Query: 272 KRSGGRDHVVMAHHPNSMLDARVKLWPAMFILSDFGRYPPTVANVEKDVIAPYKHVIRTF 93
           KRSGGRDHVV+AHHPNSMLDAR KL+PAMFILSDFGRYPPTVANVEKDVIAPYKHVI+ +
Sbjct: 207 KRSGGRDHVVLAHHPNSMLDARNKLFPAMFILSDFGRYPPTVANVEKDVIAPYKHVIKAY 266

Query: 92  VHDLSGFEDRPTLLYFQGAIYRKDG 18
            +D SGF+ RP LLYFQGAIYRKDG
Sbjct: 267 ENDTSGFDSRPILLYFQGAIYRKDG 291


>ref|XP_002875730.1| exostosin family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297321568|gb|EFH51989.1| exostosin family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 479

 Score =  155 bits (393), Expect = 2e-36
 Identities = 72/85 (84%), Positives = 79/85 (92%)
 Frame = -2

Query: 272 KRSGGRDHVVMAHHPNSMLDARVKLWPAMFILSDFGRYPPTVANVEKDVIAPYKHVIRTF 93
           KRSGGRDHVV+AHHPNSMLDAR KL+PAMFILSDFGRYPPTVANVEKD+IAPYKHVI+ +
Sbjct: 211 KRSGGRDHVVLAHHPNSMLDARNKLFPAMFILSDFGRYPPTVANVEKDIIAPYKHVIKAY 270

Query: 92  VHDLSGFEDRPTLLYFQGAIYRKDG 18
            +D SGF+ RP LLYFQGAIYRKDG
Sbjct: 271 ENDTSGFDSRPILLYFQGAIYRKDG 295


>ref|XP_003517832.1| PREDICTED: xylogalacturonan beta-1,3-xylosyltransferase-like
           [Glycine max]
          Length = 509

 Score =  154 bits (388), Expect = 9e-36
 Identities = 68/85 (80%), Positives = 79/85 (92%)
 Frame = -2

Query: 272 KRSGGRDHVVMAHHPNSMLDARVKLWPAMFILSDFGRYPPTVANVEKDVIAPYKHVIRTF 93
           KRSGG+DH+++AHHPNSMLDAR+KLWPA FILSDFGRYPP +ANVEKDVIAPYKH+I ++
Sbjct: 242 KRSGGKDHLILAHHPNSMLDARMKLWPATFILSDFGRYPPNIANVEKDVIAPYKHLISSY 301

Query: 92  VHDLSGFEDRPTLLYFQGAIYRKDG 18
           V+D S F+ RPTLLYFQGAIYRKDG
Sbjct: 302 VNDNSNFDSRPTLLYFQGAIYRKDG 326


>emb|CBI31205.3| unnamed protein product [Vitis vinifera]
          Length = 455

 Score =  153 bits (387), Expect = 1e-35
 Identities = 68/84 (80%), Positives = 78/84 (92%)
 Frame = -2

Query: 269 RSGGRDHVVMAHHPNSMLDARVKLWPAMFILSDFGRYPPTVANVEKDVIAPYKHVIRTFV 90
           RS GRDH++MAHHPNSMLDAR+KLWPA+FILSDFGRYPP +ANV KDVIAPYKHVI++F+
Sbjct: 189 RSEGRDHIIMAHHPNSMLDARMKLWPAIFILSDFGRYPPNIANVGKDVIAPYKHVIKSFI 248

Query: 89  HDLSGFEDRPTLLYFQGAIYRKDG 18
           +D S F+ RPTLLYFQGAIYRKDG
Sbjct: 249 NDTSDFDSRPTLLYFQGAIYRKDG 272


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