BLASTX nr result

ID: Coptis25_contig00045020 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00045020
         (285 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003538786.1| PREDICTED: uncharacterized protein LOC100795...    66   3e-09
ref|XP_003516621.1| PREDICTED: uncharacterized protein LOC100810...    64   1e-08
emb|CAN70108.1| hypothetical protein VITISV_002044 [Vitis vinifera]    62   4e-08
ref|XP_002525284.1| conserved hypothetical protein [Ricinus comm...    60   2e-07
ref|XP_003611559.1| Profilin [Medicago truncatula] gi|355512894|...    56   3e-06

>ref|XP_003538786.1| PREDICTED: uncharacterized protein LOC100795492 [Glycine max]
          Length = 491

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 38/79 (48%), Positives = 50/79 (63%), Gaps = 9/79 (11%)
 Frame = +2

Query: 56  SLWVFCLIASFLTAVSA-VDEFSMHVGQNTTLKLSTG--------SRSGAMVVCKRIHIH 208
           S W+  L+  + +AV    DE S+ + QN TL+LS G        S+ GA V+ +R+HIH
Sbjct: 11  SAWILRLLCLWASAVLVFADEHSLCLTQNATLQLSRGLPVGNSPGSKPGATVIVERVHIH 70

Query: 209 GLSRPHNLNKFAHSMKVKV 265
           GLSR  NL KFAHS+KVKV
Sbjct: 71  GLSRFRNLGKFAHSIKVKV 89


>ref|XP_003516621.1| PREDICTED: uncharacterized protein LOC100810145 [Glycine max]
          Length = 491

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 39/79 (49%), Positives = 49/79 (62%), Gaps = 9/79 (11%)
 Frame = +2

Query: 56  SLWVFCLIASFLTAVSA-VDEFSMHVGQNTTLKLSTG--------SRSGAMVVCKRIHIH 208
           S W   L+  + +AV    DE S+ + QN+TL+LS G        S+ GA VV +R+HIH
Sbjct: 11  SAWFLRLLCLWASAVLVFADERSLCLTQNSTLQLSRGLPVGNSPASKPGATVVVERVHIH 70

Query: 209 GLSRPHNLNKFAHSMKVKV 265
           GLSR  NL KFAHS KVKV
Sbjct: 71  GLSRFRNLGKFAHSFKVKV 89


>emb|CAN70108.1| hypothetical protein VITISV_002044 [Vitis vinifera]
          Length = 607

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 37/91 (40%), Positives = 55/91 (60%), Gaps = 13/91 (14%)
 Frame = +2

Query: 50  GFSLWVFCLIASFLT-----AVSAVDEFSMHVGQNTTLKLST--------GSRSGAMVVC 190
           G    +FC++  FLT     +++  +E ++ VGQ+T L++S         GSR G  V+C
Sbjct: 8   GICFLMFCIV--FLTFPIFPSIAFANEHALVVGQSTILQVSPWLAVENSPGSRPGTAVLC 65

Query: 191 KRIHIHGLSRPHNLNKFAHSMKVKVRVVDQS 283
           +R+ I GLSR  NL KF+HS+KVKV V + S
Sbjct: 66  ERVQIRGLSRIKNLRKFSHSVKVKVSVTNSS 96


>ref|XP_002525284.1| conserved hypothetical protein [Ricinus communis]
           gi|223535442|gb|EEF37112.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 539

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 29/79 (36%), Positives = 51/79 (64%), Gaps = 8/79 (10%)
 Frame = +2

Query: 53  FSLWVFCLIASFLTAVSAVDEFSMHVGQNTTLKLST--------GSRSGAMVVCKRIHIH 208
           F + +  L  SF  ++ +  E S+ VG+++ L+LS         G++ G++V+C+R++IH
Sbjct: 13  FIIQILLLTFSFFCSIVSAQERSLVVGESSKLQLSPSLQVFKSPGTKPGSLVLCERVYIH 72

Query: 209 GLSRPHNLNKFAHSMKVKV 265
           GLSR  NL KF+H++KV +
Sbjct: 73  GLSRLKNLQKFSHTLKVTI 91


>ref|XP_003611559.1| Profilin [Medicago truncatula] gi|355512894|gb|AES94517.1| Profilin
           [Medicago truncatula]
          Length = 485

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 31/64 (48%), Positives = 42/64 (65%), Gaps = 8/64 (12%)
 Frame = +2

Query: 98  VSAVDEFSMHVGQNTTLKLSTG--------SRSGAMVVCKRIHIHGLSRPHNLNKFAHSM 253
           V A ++ S+ + +NTTL LS G        S+ G  ++ +R+HIHGLSR  NL KFAHS+
Sbjct: 25  VLANEQRSLFIVENTTLPLSRGLPVRNSPGSKPGVTLIVERVHIHGLSRFRNLVKFAHSV 84

Query: 254 KVKV 265
           KVKV
Sbjct: 85  KVKV 88


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