BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00045013
         (278 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD21687.1| Strong similarity to gi|3600044 T12H20.12 proteas...    95   7e-18
emb|CAN68489.1| hypothetical protein VITISV_037543 [Vitis vinifera]    89   3e-16
emb|CAA19715.1| putative protein [Arabidopsis thaliana] gi|72695...    89   4e-16
gb|AAF02855.1|AC009324_4 Similar to retrotransposon proteins [Ar...    87   2e-15
emb|CAN82221.1| hypothetical protein VITISV_015226 [Vitis vinifera]    86   2e-15

>gb|AAD21687.1| Strong similarity to gi|3600044 T12H20.12 protease homolog from
           Arabidopsis thaliana BAC gb|AF080119 and is a member of
           the reverse transcriptase family PF|00078 [Arabidopsis
           thaliana]
          Length = 1415

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 46/91 (50%), Positives = 63/91 (69%)
 Frame = +2

Query: 2   GAFFYSIFIWLSLLCFHDWSKFTWIFPLHKKSEVFSVF*TFKSNMENQLNTKIKVFRCDE 181
           G  +Y+IF+        D+S+++W +PLH KSE  SVF +F+  +ENQLNTKIKVF+ D 
Sbjct: 530 GLKYYAIFV-------DDYSRYSWFYPLHNKSEFLSVFISFQKLVENQLNTKIKVFQSDG 582

Query: 182 GGEYKSVVFKSFLQENGISLQYSCPHTPQQN 274
           GGE+ S   K+ L E+GI  + SCP+TPQQN
Sbjct: 583 GGEFVSNKLKTHLSEHGIHHRISCPYTPQQN 613


>emb|CAN68489.1| hypothetical protein VITISV_037543 [Vitis vinifera]
          Length = 1449

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 42/91 (46%), Positives = 62/91 (68%)
 Frame = +2

Query: 2   GAFFYSIFIWLSLLCFHDWSKFTWIFPLHKKSEVFSVF*TFKSNMENQLNTKIKVFRCDE 181
           GA ++ +F+        D+S+F+WI+PLH K +  SVF  FKS +ENQ N++I+  R D 
Sbjct: 595 GARYFILFV-------DDFSRFSWIYPLHSKDQALSVFIKFKSLVENQFNSRIQCLRSDN 647

Query: 182 GGEYKSVVFKSFLQENGISLQYSCPHTPQQN 274
           GGE+K+  F S+L  +GI  Q+SCP+TP+QN
Sbjct: 648 GGEFKA--FSSYLATHGIKSQFSCPYTPEQN 676


>emb|CAA19715.1| putative protein [Arabidopsis thaliana] gi|7269574|emb|CAB79576.1|
           putative protein [Arabidopsis thaliana]
          Length = 1318

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 43/91 (47%), Positives = 59/91 (64%)
 Frame = +2

Query: 2   GAFFYSIFIWLSLLCFHDWSKFTWIFPLHKKSEVFSVF*TFKSNMENQLNTKIKVFRCDE 181
           G  +Y++FI         +S+F+WI+PL  KS+ +++F  F   +ENQL+ KI VF+CD 
Sbjct: 345 GFRYYAVFI-------DHYSRFSWIYPLKLKSDFYNIFLAFHKLVENQLSQKISVFQCDG 397

Query: 182 GGEYKSVVFKSFLQENGISLQYSCPHTPQQN 274
           GGE+ S  F   LQ +GI  Q SCPHTPQQN
Sbjct: 398 GGEFVSHKFLQHLQSHGIQQQLSCPHTPQQN 428


>gb|AAF02855.1|AC009324_4 Similar to retrotransposon proteins [Arabidopsis thaliana]
          Length = 1522

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 43/91 (47%), Positives = 57/91 (62%)
 Frame = +2

Query: 2   GAFFYSIFIWLSLLCFHDWSKFTWIFPLHKKSEVFSVF*TFKSNMENQLNTKIKVFRCDE 181
           G  +Y +FI         +S+FTW +PL  KS+ FS F  F+  +ENQL  KIK+F+CD 
Sbjct: 534 GFRYYVVFI-------DHYSRFTWFYPLKLKSDFFSTFVMFQKLVENQLGHKIKIFQCDG 586

Query: 182 GGEYKSVVFKSFLQENGISLQYSCPHTPQQN 274
           GGE+ S  F   LQ++GI    SCP+TPQQN
Sbjct: 587 GGEFISSQFLKHLQDHGIQQNMSCPYTPQQN 617


>emb|CAN82221.1| hypothetical protein VITISV_015226 [Vitis vinifera]
          Length = 1007

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 41/91 (45%), Positives = 60/91 (65%)
 Frame = +2

Query: 2   GAFFYSIFIWLSLLCFHDWSKFTWIFPLHKKSEVFSVF*TFKSNMENQLNTKIKVFRCDE 181
           GA ++ +F+        D+S F+WI+PLH K +  S F  FKS +ENQ N++I+  R D 
Sbjct: 247 GARYFILFV-------DDFSHFSWIYPLHSKDQALSXFIKFKSLVENQFNSRIQCLRSDN 299

Query: 182 GGEYKSVVFKSFLQENGISLQYSCPHTPQQN 274
           GGE+K+  F S+L  +GI  Q+SCP+TP+QN
Sbjct: 300 GGEFKA--FSSYLATHGIKSQFSCPYTPEQN 328