BLASTX nr result

ID: Coptis25_contig00045011 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00045011
         (311 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003600632.1| MYB transcription factor MYB174 [Medicago tr...    59   5e-07
gb|AAX33631.1| Myb2 [Pisum sativum]                                    57   1e-06
ref|XP_003519315.1| PREDICTED: uncharacterized protein LOC100785...    57   1e-06
ref|XP_003616176.1| MYB transcription factor [Medicago truncatul...    57   1e-06
ref|NP_001236066.1| MYB transcription factor MYB177 [Glycine max...    57   1e-06

>ref|XP_003600632.1| MYB transcription factor MYB174 [Medicago truncatula]
           gi|355489680|gb|AES70883.1| MYB transcription factor
           MYB174 [Medicago truncatula]
          Length = 356

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 27/39 (69%), Positives = 31/39 (79%)
 Frame = +3

Query: 3   LKLYGRAWHQIEEHVGTKTAI*IQSHAKKIISKIYFPFL 119
           LKLYGRAW  IEEHVG+KTAI I+SHA+K  SK+Y   L
Sbjct: 71  LKLYGRAWRSIEEHVGSKTAIQIRSHAQKFFSKVYSQIL 109


>gb|AAX33631.1| Myb2 [Pisum sativum]
          Length = 68

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 26/34 (76%), Positives = 30/34 (88%)
 Frame = +3

Query: 3   LKLYGRAWHQIEEHVGTKTAI*IQSHAKKIISKI 104
           LKLYGRAW +IEEHVGTKTA+ I+SHA+K  SKI
Sbjct: 20  LKLYGRAWRKIEEHVGTKTAVQIRSHAQKFFSKI 53


>ref|XP_003519315.1| PREDICTED: uncharacterized protein LOC100785040 [Glycine max]
          Length = 436

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 26/34 (76%), Positives = 30/34 (88%)
 Frame = +3

Query: 3   LKLYGRAWHQIEEHVGTKTAI*IQSHAKKIISKI 104
           LKLYGRAW +IEEHVGTKTA+ I+SHA+K  SKI
Sbjct: 75  LKLYGRAWRRIEEHVGTKTAVQIRSHAQKFFSKI 108


>ref|XP_003616176.1| MYB transcription factor [Medicago truncatula]
           gi|355517511|gb|AES99134.1| MYB transcription factor
           [Medicago truncatula]
          Length = 420

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 26/34 (76%), Positives = 30/34 (88%)
 Frame = +3

Query: 3   LKLYGRAWHQIEEHVGTKTAI*IQSHAKKIISKI 104
           LKLYGRAW +IEEHVGTKTA+ I+SHA+K  SKI
Sbjct: 58  LKLYGRAWRKIEEHVGTKTAVQIRSHAQKFFSKI 91


>ref|NP_001236066.1| MYB transcription factor MYB177 [Glycine max]
           gi|110931734|gb|ABH02866.1| MYB transcription factor
           MYB177 [Glycine max]
          Length = 436

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 26/34 (76%), Positives = 30/34 (88%)
 Frame = +3

Query: 3   LKLYGRAWHQIEEHVGTKTAI*IQSHAKKIISKI 104
           LKLYGRAW +IEEHVGTKTA+ I+SHA+K  SKI
Sbjct: 75  LKLYGRAWRRIEEHVGTKTAVQIRSHAQKFFSKI 108


Top