BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00045006
         (294 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271725.2| PREDICTED: pentatricopeptide repeat-containi...   146   2e-33
emb|CAN79811.1| hypothetical protein VITISV_018821 [Vitis vinifera]   146   2e-33
ref|XP_002318314.1| predicted protein [Populus trichocarpa] gi|2...   142   2e-32
ref|XP_003544373.1| PREDICTED: pentatricopeptide repeat-containi...   141   6e-32
ref|XP_002439335.1| hypothetical protein SORBIDRAFT_09g004560 [S...   136   2e-30

>ref|XP_002271725.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g16860-like [Vitis vinifera]
          Length = 852

 Score =  146 bits (369), Expect = 2e-33
 Identities = 69/97 (71%), Positives = 77/97 (79%)
 Frame = -2

Query: 293 AAQNVFHRMSTKNDVSWTSLMTAYGMHGRGEEALQVFNTMQKASLVPDEVTFLVVLYACS 114
           AA+ VF  M  +N VSWTSLMT YGMHGRGEEALQ+F  MQK  LVPD VTF+VVLYACS
Sbjct: 533 AARVVFDNMHQRNGVSWTSLMTGYGMHGRGEEALQIFYEMQKVGLVPDGVTFVVVLYACS 592

Query: 113 HSGMIEKGIEYFNTMQGKYGVAPGKEHYACMVDLLGR 3
           HSGM+++GI YFN M   +GV PG EHYACMVDLL R
Sbjct: 593 HSGMVDQGINYFNGMNKDFGVVPGAEHYACMVDLLSR 629


>emb|CAN79811.1| hypothetical protein VITISV_018821 [Vitis vinifera]
          Length = 871

 Score =  146 bits (368), Expect = 2e-33
 Identities = 69/97 (71%), Positives = 77/97 (79%)
 Frame = -2

Query: 293 AAQNVFHRMSTKNDVSWTSLMTAYGMHGRGEEALQVFNTMQKASLVPDEVTFLVVLYACS 114
           AA+ VF  M  +N VSWTSLMT YGMHGRGEEALQ+F  MQK  LVPD VTF+VVLYACS
Sbjct: 552 AARVVFDNMHQRNGVSWTSLMTGYGMHGRGEEALQIFYEMQKVXLVPDGVTFVVVLYACS 611

Query: 113 HSGMIEKGIEYFNTMQGKYGVAPGKEHYACMVDLLGR 3
           HSGM+++GI YFN M   +GV PG EHYACMVDLL R
Sbjct: 612 HSGMVDQGINYFNGMNKDFGVVPGAEHYACMVDLLSR 648


>ref|XP_002318314.1| predicted protein [Populus trichocarpa] gi|222858987|gb|EEE96534.1|
           predicted protein [Populus trichocarpa]
          Length = 539

 Score =  142 bits (359), Expect = 2e-32
 Identities = 66/96 (68%), Positives = 80/96 (83%)
 Frame = -2

Query: 290 AQNVFHRMSTKNDVSWTSLMTAYGMHGRGEEALQVFNTMQKASLVPDEVTFLVVLYACSH 111
           A+ VF  +  KN VSWTSLMT YGMHGRG+EAL+VF+ M++  L PD VT LVVLYACSH
Sbjct: 221 ARFVFDNLKQKNFVSWTSLMTGYGMHGRGKEALEVFDEMRRVGLQPDGVTLLVVLYACSH 280

Query: 110 SGMIEKGIEYFNTMQGKYGVAPGKEHYACMVDLLGR 3
           SGMI++GIE+FN+M  ++GV PG+EHYACMVDLLGR
Sbjct: 281 SGMIDQGIEFFNSMSKEFGVIPGQEHYACMVDLLGR 316


>ref|XP_003544373.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g16860-like [Glycine max]
          Length = 986

 Score =  141 bits (355), Expect = 6e-32
 Identities = 66/96 (68%), Positives = 76/96 (79%)
 Frame = -2

Query: 290 AQNVFHRMSTKNDVSWTSLMTAYGMHGRGEEALQVFNTMQKASLVPDEVTFLVVLYACSH 111
           AQ VF  M  +N VSWTSLMT YGMHGRGE+AL+VF+ M+K  LVPD +TFLVVLYACSH
Sbjct: 668 AQIVFDNMPQRNAVSWTSLMTGYGMHGRGEDALRVFDEMRKVPLVPDGITFLVVLYACSH 727

Query: 110 SGMIEKGIEYFNTMQGKYGVAPGKEHYACMVDLLGR 3
           SGM++ GI +FN M   +GV PG EHYACMVDL GR
Sbjct: 728 SGMVDHGINFFNRMSKDFGVDPGPEHYACMVDLWGR 763


>ref|XP_002439335.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
           gi|241944620|gb|EES17765.1| hypothetical protein
           SORBIDRAFT_09g004560 [Sorghum bicolor]
          Length = 886

 Score =  136 bits (343), Expect = 2e-30
 Identities = 57/96 (59%), Positives = 79/96 (82%)
 Frame = -2

Query: 290 AQNVFHRMSTKNDVSWTSLMTAYGMHGRGEEALQVFNTMQKASLVPDEVTFLVVLYACSH 111
           A+NVF  M  +N+VSWTS+M+ YGMHGRG+EAL +F+ MQKA  VPD+++FLV+LYACSH
Sbjct: 568 ARNVFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISFLVLLYACSH 627

Query: 110 SGMIEKGIEYFNTMQGKYGVAPGKEHYACMVDLLGR 3
           SGM+++G++YF+ M+  YGV    +HYAC++DLL R
Sbjct: 628 SGMVDQGLDYFDIMRSDYGVIASAQHYACVIDLLAR 663