BLASTX nr result
ID: Coptis25_contig00045006
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00045006 (294 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002271725.2| PREDICTED: pentatricopeptide repeat-containi... 146 2e-33 emb|CAN79811.1| hypothetical protein VITISV_018821 [Vitis vinifera] 146 2e-33 ref|XP_002318314.1| predicted protein [Populus trichocarpa] gi|2... 142 2e-32 ref|XP_003544373.1| PREDICTED: pentatricopeptide repeat-containi... 141 6e-32 ref|XP_002439335.1| hypothetical protein SORBIDRAFT_09g004560 [S... 136 2e-30 >ref|XP_002271725.2| PREDICTED: pentatricopeptide repeat-containing protein At5g16860-like [Vitis vinifera] Length = 852 Score = 146 bits (369), Expect = 2e-33 Identities = 69/97 (71%), Positives = 77/97 (79%) Frame = -2 Query: 293 AAQNVFHRMSTKNDVSWTSLMTAYGMHGRGEEALQVFNTMQKASLVPDEVTFLVVLYACS 114 AA+ VF M +N VSWTSLMT YGMHGRGEEALQ+F MQK LVPD VTF+VVLYACS Sbjct: 533 AARVVFDNMHQRNGVSWTSLMTGYGMHGRGEEALQIFYEMQKVGLVPDGVTFVVVLYACS 592 Query: 113 HSGMIEKGIEYFNTMQGKYGVAPGKEHYACMVDLLGR 3 HSGM+++GI YFN M +GV PG EHYACMVDLL R Sbjct: 593 HSGMVDQGINYFNGMNKDFGVVPGAEHYACMVDLLSR 629 >emb|CAN79811.1| hypothetical protein VITISV_018821 [Vitis vinifera] Length = 871 Score = 146 bits (368), Expect = 2e-33 Identities = 69/97 (71%), Positives = 77/97 (79%) Frame = -2 Query: 293 AAQNVFHRMSTKNDVSWTSLMTAYGMHGRGEEALQVFNTMQKASLVPDEVTFLVVLYACS 114 AA+ VF M +N VSWTSLMT YGMHGRGEEALQ+F MQK LVPD VTF+VVLYACS Sbjct: 552 AARVVFDNMHQRNGVSWTSLMTGYGMHGRGEEALQIFYEMQKVXLVPDGVTFVVVLYACS 611 Query: 113 HSGMIEKGIEYFNTMQGKYGVAPGKEHYACMVDLLGR 3 HSGM+++GI YFN M +GV PG EHYACMVDLL R Sbjct: 612 HSGMVDQGINYFNGMNKDFGVVPGAEHYACMVDLLSR 648 >ref|XP_002318314.1| predicted protein [Populus trichocarpa] gi|222858987|gb|EEE96534.1| predicted protein [Populus trichocarpa] Length = 539 Score = 142 bits (359), Expect = 2e-32 Identities = 66/96 (68%), Positives = 80/96 (83%) Frame = -2 Query: 290 AQNVFHRMSTKNDVSWTSLMTAYGMHGRGEEALQVFNTMQKASLVPDEVTFLVVLYACSH 111 A+ VF + KN VSWTSLMT YGMHGRG+EAL+VF+ M++ L PD VT LVVLYACSH Sbjct: 221 ARFVFDNLKQKNFVSWTSLMTGYGMHGRGKEALEVFDEMRRVGLQPDGVTLLVVLYACSH 280 Query: 110 SGMIEKGIEYFNTMQGKYGVAPGKEHYACMVDLLGR 3 SGMI++GIE+FN+M ++GV PG+EHYACMVDLLGR Sbjct: 281 SGMIDQGIEFFNSMSKEFGVIPGQEHYACMVDLLGR 316 >ref|XP_003544373.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16860-like [Glycine max] Length = 986 Score = 141 bits (355), Expect = 6e-32 Identities = 66/96 (68%), Positives = 76/96 (79%) Frame = -2 Query: 290 AQNVFHRMSTKNDVSWTSLMTAYGMHGRGEEALQVFNTMQKASLVPDEVTFLVVLYACSH 111 AQ VF M +N VSWTSLMT YGMHGRGE+AL+VF+ M+K LVPD +TFLVVLYACSH Sbjct: 668 AQIVFDNMPQRNAVSWTSLMTGYGMHGRGEDALRVFDEMRKVPLVPDGITFLVVLYACSH 727 Query: 110 SGMIEKGIEYFNTMQGKYGVAPGKEHYACMVDLLGR 3 SGM++ GI +FN M +GV PG EHYACMVDL GR Sbjct: 728 SGMVDHGINFFNRMSKDFGVDPGPEHYACMVDLWGR 763 >ref|XP_002439335.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor] gi|241944620|gb|EES17765.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor] Length = 886 Score = 136 bits (343), Expect = 2e-30 Identities = 57/96 (59%), Positives = 79/96 (82%) Frame = -2 Query: 290 AQNVFHRMSTKNDVSWTSLMTAYGMHGRGEEALQVFNTMQKASLVPDEVTFLVVLYACSH 111 A+NVF M +N+VSWTS+M+ YGMHGRG+EAL +F+ MQKA VPD+++FLV+LYACSH Sbjct: 568 ARNVFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISFLVLLYACSH 627 Query: 110 SGMIEKGIEYFNTMQGKYGVAPGKEHYACMVDLLGR 3 SGM+++G++YF+ M+ YGV +HYAC++DLL R Sbjct: 628 SGMVDQGLDYFDIMRSDYGVIASAQHYACVIDLLAR 663