BLASTX nr result
ID: Coptis25_contig00044474
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00044474 (250 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAN68235.1| hypothetical protein VITISV_037104 [Vitis vinifera] 47 7e-07 emb|CAN80930.1| hypothetical protein VITISV_005279 [Vitis vinifera] 47 1e-06 emb|CAN74767.1| hypothetical protein VITISV_041860 [Vitis vinifera] 47 2e-06 emb|CAN77122.1| hypothetical protein VITISV_013624 [Vitis vinifera] 44 2e-06 emb|CAN72453.1| hypothetical protein VITISV_008931 [Vitis vinifera] 47 5e-06 >emb|CAN68235.1| hypothetical protein VITISV_037104 [Vitis vinifera] Length = 2041 Score = 46.6 bits (109), Expect(2) = 7e-07 Identities = 24/38 (63%), Positives = 28/38 (73%), Gaps = 1/38 (2%) Frame = -3 Query: 113 GYTDSDQAGSVDDMKSTSEYTFLLGY-VLVGASKKQEI 3 GY DSD AGSVDDMKSTS Y F +G V+ S+KQE+ Sbjct: 1883 GYADSDWAGSVDDMKSTSGYAFTIGSGVICWNSRKQEV 1920 Score = 31.2 bits (69), Expect(2) = 7e-07 Identities = 13/23 (56%), Positives = 16/23 (69%) Frame = -2 Query: 228 FCGPPSQIHYGAAKRLLKNLQGT 160 F PS +H G AKR+LK L+GT Sbjct: 1844 FMSSPSNVHMGVAKRVLKYLKGT 1866 >emb|CAN80930.1| hypothetical protein VITISV_005279 [Vitis vinifera] Length = 1291 Score = 47.0 bits (110), Expect(2) = 1e-06 Identities = 28/60 (46%), Positives = 37/60 (61%), Gaps = 2/60 (3%) Frame = -3 Query: 176 KTYKVRWSIRVWYMV*S*F-VYGYTDSDQAGSVDDMKSTSEYTFLLGY-VLVGASKKQEI 3 K K ++ +WY+ + GY DSD AGSVDDMKSTS Y F +G V+ S+KQE+ Sbjct: 1093 KYVKGTTNLGIWYLKSGGVKLNGYADSDWAGSVDDMKSTSGYAFTIGSGVICWNSRKQEV 1152 Score = 30.0 bits (66), Expect(2) = 1e-06 Identities = 12/23 (52%), Positives = 16/23 (69%) Frame = -2 Query: 228 FCGPPSQIHYGAAKRLLKNLQGT 160 F PS +H G AKR+LK ++GT Sbjct: 1076 FMSSPSNVHMGVAKRVLKYVKGT 1098 >emb|CAN74767.1| hypothetical protein VITISV_041860 [Vitis vinifera] Length = 1945 Score = 47.4 bits (111), Expect(2) = 2e-06 Identities = 24/38 (63%), Positives = 28/38 (73%), Gaps = 1/38 (2%) Frame = -3 Query: 113 GYTDSDQAGSVDDMKSTSEYTFLLGY-VLVGASKKQEI 3 GY DSD AGSVDDMKSTS Y F +G V+ S+KQE+ Sbjct: 1238 GYADSDWAGSVDDMKSTSSYVFTIGSGVICWNSRKQEV 1275 Score = 28.9 bits (63), Expect(2) = 2e-06 Identities = 11/23 (47%), Positives = 16/23 (69%) Frame = -2 Query: 228 FCGPPSQIHYGAAKRLLKNLQGT 160 F PS +H G +KR+LK ++GT Sbjct: 1199 FLSSPSNVHMGVSKRVLKYVKGT 1221 >emb|CAN77122.1| hypothetical protein VITISV_013624 [Vitis vinifera] Length = 1269 Score = 44.3 bits (103), Expect(2) = 2e-06 Identities = 23/38 (60%), Positives = 27/38 (71%), Gaps = 1/38 (2%) Frame = -3 Query: 113 GYTDSDQAGSVDDMKSTSEYTFLLGY-VLVGASKKQEI 3 GY DSD AGSVDDMKST Y F +G V+ S+KQE+ Sbjct: 1111 GYADSDWAGSVDDMKSTLGYVFTIGSGVICWNSRKQEV 1148 Score = 32.0 bits (71), Expect(2) = 2e-06 Identities = 13/28 (46%), Positives = 19/28 (67%) Frame = -2 Query: 243 MCYLWFCGPPSQIHYGAAKRLLKNLQGT 160 +C+ F PS +H G AKR+LK ++GT Sbjct: 1067 VCFPRFMSLPSNVHMGVAKRVLKYVKGT 1094 >emb|CAN72453.1| hypothetical protein VITISV_008931 [Vitis vinifera] Length = 977 Score = 46.6 bits (109), Expect(2) = 5e-06 Identities = 24/38 (63%), Positives = 28/38 (73%), Gaps = 1/38 (2%) Frame = -3 Query: 113 GYTDSDQAGSVDDMKSTSEYTFLLGY-VLVGASKKQEI 3 GY DSD AGSVDDMKSTS Y F +G V+ S+KQE+ Sbjct: 832 GYADSDWAGSVDDMKSTSGYVFTIGSGVICWNSRKQEV 869 Score = 28.5 bits (62), Expect(2) = 5e-06 Identities = 12/23 (52%), Positives = 15/23 (65%) Frame = -2 Query: 228 FCGPPSQIHYGAAKRLLKNLQGT 160 F PS H G AKR+LK ++GT Sbjct: 793 FMSSPSNAHMGVAKRVLKYVKGT 815