BLASTX nr result

ID: Coptis25_contig00044474 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00044474
         (250 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN68235.1| hypothetical protein VITISV_037104 [Vitis vinifera]    47   7e-07
emb|CAN80930.1| hypothetical protein VITISV_005279 [Vitis vinifera]    47   1e-06
emb|CAN74767.1| hypothetical protein VITISV_041860 [Vitis vinifera]    47   2e-06
emb|CAN77122.1| hypothetical protein VITISV_013624 [Vitis vinifera]    44   2e-06
emb|CAN72453.1| hypothetical protein VITISV_008931 [Vitis vinifera]    47   5e-06

>emb|CAN68235.1| hypothetical protein VITISV_037104 [Vitis vinifera]
          Length = 2041

 Score = 46.6 bits (109), Expect(2) = 7e-07
 Identities = 24/38 (63%), Positives = 28/38 (73%), Gaps = 1/38 (2%)
 Frame = -3

Query: 113  GYTDSDQAGSVDDMKSTSEYTFLLGY-VLVGASKKQEI 3
            GY DSD AGSVDDMKSTS Y F +G  V+   S+KQE+
Sbjct: 1883 GYADSDWAGSVDDMKSTSGYAFTIGSGVICWNSRKQEV 1920



 Score = 31.2 bits (69), Expect(2) = 7e-07
 Identities = 13/23 (56%), Positives = 16/23 (69%)
 Frame = -2

Query: 228  FCGPPSQIHYGAAKRLLKNLQGT 160
            F   PS +H G AKR+LK L+GT
Sbjct: 1844 FMSSPSNVHMGVAKRVLKYLKGT 1866


>emb|CAN80930.1| hypothetical protein VITISV_005279 [Vitis vinifera]
          Length = 1291

 Score = 47.0 bits (110), Expect(2) = 1e-06
 Identities = 28/60 (46%), Positives = 37/60 (61%), Gaps = 2/60 (3%)
 Frame = -3

Query: 176  KTYKVRWSIRVWYMV*S*F-VYGYTDSDQAGSVDDMKSTSEYTFLLGY-VLVGASKKQEI 3
            K  K   ++ +WY+      + GY DSD AGSVDDMKSTS Y F +G  V+   S+KQE+
Sbjct: 1093 KYVKGTTNLGIWYLKSGGVKLNGYADSDWAGSVDDMKSTSGYAFTIGSGVICWNSRKQEV 1152



 Score = 30.0 bits (66), Expect(2) = 1e-06
 Identities = 12/23 (52%), Positives = 16/23 (69%)
 Frame = -2

Query: 228  FCGPPSQIHYGAAKRLLKNLQGT 160
            F   PS +H G AKR+LK ++GT
Sbjct: 1076 FMSSPSNVHMGVAKRVLKYVKGT 1098


>emb|CAN74767.1| hypothetical protein VITISV_041860 [Vitis vinifera]
          Length = 1945

 Score = 47.4 bits (111), Expect(2) = 2e-06
 Identities = 24/38 (63%), Positives = 28/38 (73%), Gaps = 1/38 (2%)
 Frame = -3

Query: 113  GYTDSDQAGSVDDMKSTSEYTFLLGY-VLVGASKKQEI 3
            GY DSD AGSVDDMKSTS Y F +G  V+   S+KQE+
Sbjct: 1238 GYADSDWAGSVDDMKSTSSYVFTIGSGVICWNSRKQEV 1275



 Score = 28.9 bits (63), Expect(2) = 2e-06
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = -2

Query: 228  FCGPPSQIHYGAAKRLLKNLQGT 160
            F   PS +H G +KR+LK ++GT
Sbjct: 1199 FLSSPSNVHMGVSKRVLKYVKGT 1221


>emb|CAN77122.1| hypothetical protein VITISV_013624 [Vitis vinifera]
          Length = 1269

 Score = 44.3 bits (103), Expect(2) = 2e-06
 Identities = 23/38 (60%), Positives = 27/38 (71%), Gaps = 1/38 (2%)
 Frame = -3

Query: 113  GYTDSDQAGSVDDMKSTSEYTFLLGY-VLVGASKKQEI 3
            GY DSD AGSVDDMKST  Y F +G  V+   S+KQE+
Sbjct: 1111 GYADSDWAGSVDDMKSTLGYVFTIGSGVICWNSRKQEV 1148



 Score = 32.0 bits (71), Expect(2) = 2e-06
 Identities = 13/28 (46%), Positives = 19/28 (67%)
 Frame = -2

Query: 243  MCYLWFCGPPSQIHYGAAKRLLKNLQGT 160
            +C+  F   PS +H G AKR+LK ++GT
Sbjct: 1067 VCFPRFMSLPSNVHMGVAKRVLKYVKGT 1094


>emb|CAN72453.1| hypothetical protein VITISV_008931 [Vitis vinifera]
          Length = 977

 Score = 46.6 bits (109), Expect(2) = 5e-06
 Identities = 24/38 (63%), Positives = 28/38 (73%), Gaps = 1/38 (2%)
 Frame = -3

Query: 113 GYTDSDQAGSVDDMKSTSEYTFLLGY-VLVGASKKQEI 3
           GY DSD AGSVDDMKSTS Y F +G  V+   S+KQE+
Sbjct: 832 GYADSDWAGSVDDMKSTSGYVFTIGSGVICWNSRKQEV 869



 Score = 28.5 bits (62), Expect(2) = 5e-06
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = -2

Query: 228 FCGPPSQIHYGAAKRLLKNLQGT 160
           F   PS  H G AKR+LK ++GT
Sbjct: 793 FMSSPSNAHMGVAKRVLKYVKGT 815


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