BLASTX nr result

ID: Coptis25_contig00044461 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00044461
         (316 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37515.3| unnamed protein product [Vitis vinifera]              152   4e-35
ref|XP_002264607.1| PREDICTED: DNA topoisomerase 3-alpha [Vitis ...   152   4e-35
ref|NP_001173278.1| Os03g0165000 [Oryza sativa Japonica Group] g...   149   2e-34
gb|EEE58379.1| hypothetical protein OsJ_09535 [Oryza sativa Japo...   149   2e-34
gb|EEC74578.1| hypothetical protein OsI_10148 [Oryza sativa Indi...   149   2e-34

>emb|CBI37515.3| unnamed protein product [Vitis vinifera]
          Length = 373

 Score =  152 bits (383), Expect = 4e-35
 Identities = 76/108 (70%), Positives = 88/108 (81%), Gaps = 4/108 (3%)
 Frame = -1

Query: 316 IAFEVLDVCKRVNSRLIVWRALFSAITPRDIHEAVQRLVQPDERKADAVDFRQEIDLRIG 137
           IAFEVL+VC +VN  + VWRA FSA+  R+IHE+VQ LV+P++  ADAVD RQEIDLRIG
Sbjct: 124 IAFEVLEVCAQVNRHIDVWRARFSALIDREIHESVQNLVRPNQLFADAVDVRQEIDLRIG 183

Query: 136 ASFTRFQTMLLKDKFVF----EDEVRVLSYGPCQFPTLGFIVERYWEI 5
           ASFTRFQTMLL+D FV     +D   VLSYGPCQFPTLGF+VERYWEI
Sbjct: 184 ASFTRFQTMLLRDAFVLDFAADDRNLVLSYGPCQFPTLGFVVERYWEI 231


>ref|XP_002264607.1| PREDICTED: DNA topoisomerase 3-alpha [Vitis vinifera]
          Length = 914

 Score =  152 bits (383), Expect = 4e-35
 Identities = 76/108 (70%), Positives = 88/108 (81%), Gaps = 4/108 (3%)
 Frame = -1

Query: 316 IAFEVLDVCKRVNSRLIVWRALFSAITPRDIHEAVQRLVQPDERKADAVDFRQEIDLRIG 137
           IAFEVL+VC +VN  + VWRA FSA+  R+IHE+VQ LV+P++  ADAVD RQEIDLRIG
Sbjct: 124 IAFEVLEVCAQVNRHIDVWRARFSALIDREIHESVQNLVRPNQLFADAVDVRQEIDLRIG 183

Query: 136 ASFTRFQTMLLKDKFVF----EDEVRVLSYGPCQFPTLGFIVERYWEI 5
           ASFTRFQTMLL+D FV     +D   VLSYGPCQFPTLGF+VERYWEI
Sbjct: 184 ASFTRFQTMLLRDAFVLDFAADDRNLVLSYGPCQFPTLGFVVERYWEI 231


>ref|NP_001173278.1| Os03g0165000 [Oryza sativa Japonica Group]
           gi|255674230|dbj|BAH92006.1| Os03g0165000 [Oryza sativa
           Japonica Group]
          Length = 928

 Score =  149 bits (377), Expect = 2e-34
 Identities = 75/108 (69%), Positives = 87/108 (80%), Gaps = 4/108 (3%)
 Frame = -1

Query: 316 IAFEVLDVCKRVNSRLIVWRALFSAITPRDIHEAVQRLVQPDERKADAVDFRQEIDLRIG 137
           IA+EV+D+C   NSRL +WRA FSA+  R+IHEAVQ L +P++  ADAVD RQEIDLRIG
Sbjct: 134 IAYEVIDICAGANSRLNIWRARFSALIDREIHEAVQHLDRPNKLFADAVDARQEIDLRIG 193

Query: 136 ASFTRFQTMLLKDKFVF----EDEVRVLSYGPCQFPTLGFIVERYWEI 5
           ASFTRFQTMLLKD FV     +D   +LSYGPCQFPTLGFIVER+WEI
Sbjct: 194 ASFTRFQTMLLKDAFVLDDTGDDRNIILSYGPCQFPTLGFIVERFWEI 241


>gb|EEE58379.1| hypothetical protein OsJ_09535 [Oryza sativa Japonica Group]
          Length = 983

 Score =  149 bits (377), Expect = 2e-34
 Identities = 75/108 (69%), Positives = 87/108 (80%), Gaps = 4/108 (3%)
 Frame = -1

Query: 316 IAFEVLDVCKRVNSRLIVWRALFSAITPRDIHEAVQRLVQPDERKADAVDFRQEIDLRIG 137
           IA+EV+D+C   NSRL +WRA FSA+  R+IHEAVQ L +P++  ADAVD RQEIDLRIG
Sbjct: 232 IAYEVIDICAGANSRLNIWRARFSALIDREIHEAVQHLDRPNKLFADAVDARQEIDLRIG 291

Query: 136 ASFTRFQTMLLKDKFVF----EDEVRVLSYGPCQFPTLGFIVERYWEI 5
           ASFTRFQTMLLKD FV     +D   +LSYGPCQFPTLGFIVER+WEI
Sbjct: 292 ASFTRFQTMLLKDAFVLDDTGDDRNIILSYGPCQFPTLGFIVERFWEI 339


>gb|EEC74578.1| hypothetical protein OsI_10148 [Oryza sativa Indica Group]
          Length = 981

 Score =  149 bits (377), Expect = 2e-34
 Identities = 75/108 (69%), Positives = 87/108 (80%), Gaps = 4/108 (3%)
 Frame = -1

Query: 316 IAFEVLDVCKRVNSRLIVWRALFSAITPRDIHEAVQRLVQPDERKADAVDFRQEIDLRIG 137
           IA+EV+D+C   NSRL +WRA FSA+  R+IHEAVQ L +P++  ADAVD RQEIDLRIG
Sbjct: 232 IAYEVIDICAGANSRLNIWRARFSALIDREIHEAVQHLDRPNKLFADAVDARQEIDLRIG 291

Query: 136 ASFTRFQTMLLKDKFVF----EDEVRVLSYGPCQFPTLGFIVERYWEI 5
           ASFTRFQTMLLKD FV     +D   +LSYGPCQFPTLGFIVER+WEI
Sbjct: 292 ASFTRFQTMLLKDAFVLDDTGDDRNIILSYGPCQFPTLGFIVERFWEI 339


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