BLASTX nr result

ID: Coptis25_contig00044460 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00044460
         (298 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002528598.1| conserved hypothetical protein [Ricinus comm...   130   9e-29
ref|XP_002327764.1| predicted protein [Populus trichocarpa] gi|2...   130   9e-29
ref|XP_002283339.2| PREDICTED: UPF0481 protein At3g47200-like [V...   124   6e-27
emb|CBI30256.3| unnamed protein product [Vitis vinifera]              124   6e-27
emb|CAN75021.1| hypothetical protein VITISV_026781 [Vitis vinifera]   123   1e-26

>ref|XP_002528598.1| conserved hypothetical protein [Ricinus communis]
           gi|223531994|gb|EEF33806.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 489

 Score =  130 bits (328), Expect = 9e-29
 Identities = 60/100 (60%), Positives = 79/100 (79%), Gaps = 2/100 (2%)
 Frame = -3

Query: 296 LSAIKQLEGKSRNCYSQILNLSSDELVEMLVLDGCFIVELFRIVGGVVQTDPDDPIFALS 117
           L AIK LE ++R CYS+ + L +DE VEM+VLDGCFI+ELFR V  VVQ + DDPIF + 
Sbjct: 151 LKAIKALEMEARECYSETIQLDTDEFVEMMVLDGCFIIELFRKVADVVQVEADDPIFTMQ 210

Query: 116 WVLSFLLRDLVKLENQIPFFILQALYDLSKMP--EEEPGP 3
           W+++F  RDL++LENQIPFFIL+ L+DLS++P  +E PGP
Sbjct: 211 WIITFFYRDLLRLENQIPFFILERLFDLSRIPGEDENPGP 250


>ref|XP_002327764.1| predicted protein [Populus trichocarpa] gi|222836849|gb|EEE75242.1|
           predicted protein [Populus trichocarpa]
          Length = 419

 Score =  130 bits (328), Expect = 9e-29
 Identities = 56/98 (57%), Positives = 79/98 (80%)
 Frame = -3

Query: 296 LSAIKQLEGKSRNCYSQILNLSSDELVEMLVLDGCFIVELFRIVGGVVQTDPDDPIFALS 117
           L AI+ LE K+R CYSQI++  +DE +EM+V+DGCFI+ELFR VG VV+ + DDPI  ++
Sbjct: 84  LKAIQPLEKKARECYSQIIHFDTDEFIEMMVVDGCFIIELFRKVGNVVEFEVDDPIVTMA 143

Query: 116 WVLSFLLRDLVKLENQIPFFILQALYDLSKMPEEEPGP 3
           W++ F  RDL++LENQIPFF+L+ L+D+++MP EE GP
Sbjct: 144 WIIPFFYRDLLRLENQIPFFVLECLFDITRMPGEESGP 181


>ref|XP_002283339.2| PREDICTED: UPF0481 protein At3g47200-like [Vitis vinifera]
          Length = 442

 Score =  124 bits (312), Expect = 6e-27
 Identities = 55/98 (56%), Positives = 78/98 (79%)
 Frame = -3

Query: 296 LSAIKQLEGKSRNCYSQILNLSSDELVEMLVLDGCFIVELFRIVGGVVQTDPDDPIFALS 117
           L A++ LE ++R CYS+I++L + + +EMLVLDGCFI++ FR +G +   +PDDP+ ++S
Sbjct: 107 LRALQPLEMEARECYSEIIHLDTHDFLEMLVLDGCFIIDFFRKIGKMHPFEPDDPLVSMS 166

Query: 116 WVLSFLLRDLVKLENQIPFFILQALYDLSKMPEEEPGP 3
           WV SF LRDL+ LENQ+PFF+LQ L+DL+KMP EE GP
Sbjct: 167 WVFSFFLRDLLLLENQLPFFVLQRLFDLTKMPGEESGP 204


>emb|CBI30256.3| unnamed protein product [Vitis vinifera]
          Length = 441

 Score =  124 bits (312), Expect = 6e-27
 Identities = 55/98 (56%), Positives = 78/98 (79%)
 Frame = -3

Query: 296 LSAIKQLEGKSRNCYSQILNLSSDELVEMLVLDGCFIVELFRIVGGVVQTDPDDPIFALS 117
           L A++ LE ++R CYS+I++L + + +EMLVLDGCFI++ FR +G +   +PDDP+ ++S
Sbjct: 106 LRALQPLEMEARECYSEIIHLDTHDFLEMLVLDGCFIIDFFRKIGKMHPFEPDDPLVSMS 165

Query: 116 WVLSFLLRDLVKLENQIPFFILQALYDLSKMPEEEPGP 3
           WV SF LRDL+ LENQ+PFF+LQ L+DL+KMP EE GP
Sbjct: 166 WVFSFFLRDLLLLENQLPFFVLQRLFDLTKMPGEESGP 203


>emb|CAN75021.1| hypothetical protein VITISV_026781 [Vitis vinifera]
          Length = 441

 Score =  123 bits (309), Expect = 1e-26
 Identities = 55/98 (56%), Positives = 77/98 (78%)
 Frame = -3

Query: 296 LSAIKQLEGKSRNCYSQILNLSSDELVEMLVLDGCFIVELFRIVGGVVQTDPDDPIFALS 117
           L A++ LE  +R CYS+I++L + + +EMLVLDGCFI++ FR +G +   +PDDP+ ++S
Sbjct: 106 LRALQPLEMXARECYSEIIHLXTHDFLEMLVLDGCFIIDFFRKIGKMHPFEPDDPLVSMS 165

Query: 116 WVLSFLLRDLVKLENQIPFFILQALYDLSKMPEEEPGP 3
           WV SF LRDL+ LENQ+PFF+LQ L+DL+KMP EE GP
Sbjct: 166 WVFSFFLRDLLLLENQLPFFVLQRLFDLTKMPGEESGP 203


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