BLASTX nr result

ID: Coptis25_contig00044449 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00044449
         (322 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282954.2| PREDICTED: serine incorporator 3-like [Vitis...   115   3e-24
emb|CBI33332.3| unnamed protein product [Vitis vinifera]              110   9e-23
ref|XP_004134388.1| PREDICTED: serine incorporator 3-like [Cucum...   100   2e-19
ref|NP_850202.4| Serinc-domain containing serine and sphingolipi...    92   3e-17
ref|XP_002518169.1| conserved hypothetical protein [Ricinus comm...    91   8e-17

>ref|XP_002282954.2| PREDICTED: serine incorporator 3-like [Vitis vinifera]
          Length = 496

 Score =  115 bits (289), Expect = 3e-24
 Identities = 56/106 (52%), Positives = 75/106 (70%), Gaps = 3/106 (2%)
 Frame = +3

Query: 12  PIEAVESIVIEIRPRTSNVVP---VKESSLNVEWENFECSTERKKSIHARYVYGFIFLLT 182
           P+ +  + V+E +   +NV+    V+E    +E ++ ECS ERKKS+ ARY YG IFLLT
Sbjct: 72  PLMSASAEVVEAKVGENNVISLEMVEELPTALEQKSVECSVERKKSLQARYSYGIIFLLT 131

Query: 183 NLMAWLIRDYGQKFFAKINYLKACGVGGLECSRTIGVLRVSLGCFI 320
           NL AW IRDYGQK F ++ YL++CG+ G +C  T+GVLRVSLGCFI
Sbjct: 132 NLSAWFIRDYGQKVFPQLQYLESCGIEGRDCFHTMGVLRVSLGCFI 177


>emb|CBI33332.3| unnamed protein product [Vitis vinifera]
          Length = 402

 Score =  110 bits (276), Expect = 9e-23
 Identities = 51/82 (62%), Positives = 63/82 (76%)
 Frame = +3

Query: 75  VKESSLNVEWENFECSTERKKSIHARYVYGFIFLLTNLMAWLIRDYGQKFFAKINYLKAC 254
           V+E    +E ++ ECS ERKKS+ ARY YG IFLLTNL AW IRDYGQK F ++ YL++C
Sbjct: 2   VEELPTALEQKSVECSVERKKSLQARYSYGIIFLLTNLSAWFIRDYGQKVFPQLQYLESC 61

Query: 255 GVGGLECSRTIGVLRVSLGCFI 320
           G+ G +C  T+GVLRVSLGCFI
Sbjct: 62  GIEGRDCFHTMGVLRVSLGCFI 83


>ref|XP_004134388.1| PREDICTED: serine incorporator 3-like [Cucumis sativus]
           gi|449487606|ref|XP_004157710.1| PREDICTED: serine
           incorporator 3-like [Cucumis sativus]
          Length = 441

 Score =  100 bits (248), Expect = 2e-19
 Identities = 44/77 (57%), Positives = 57/77 (74%), Gaps = 2/77 (2%)
 Frame = +3

Query: 96  VEWE--NFECSTERKKSIHARYVYGFIFLLTNLMAWLIRDYGQKFFAKINYLKACGVGGL 269
           V WE  N + + E+KKS+  RYVY  IFL+TNL+AW +RDYGQ+   +++YLK CG GG 
Sbjct: 38  VSWETPNADYANEKKKSLRVRYVYSIIFLITNLIAWFLRDYGQRILPQLHYLKPCGAGGQ 97

Query: 270 ECSRTIGVLRVSLGCFI 320
           +C   +GVLRVSLGCFI
Sbjct: 98  DCFHALGVLRVSLGCFI 114


>ref|NP_850202.4| Serinc-domain containing serine and sphingolipid biosynthesis
           protein [Arabidopsis thaliana]
           gi|330253704|gb|AEC08798.1| Serinc-domain containing
           serine and sphingolipid biosynthesis protein
           [Arabidopsis thaliana]
          Length = 422

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 46/106 (43%), Positives = 61/106 (57%)
 Frame = +3

Query: 3   MSDPIEAVESIVIEIRPRTSNVVPVKESSLNVEWENFECSTERKKSIHARYVYGFIFLLT 182
           M+   EA  +  ++I P       + E  + +E  +     E+ KS+ ARY YG IFL+ 
Sbjct: 1   MNGSAEATRTRPLQISPGDLEAAHLDELIMEIEQRSLYYYQEKNKSLRARYTYGTIFLII 60

Query: 183 NLMAWLIRDYGQKFFAKINYLKACGVGGLECSRTIGVLRVSLGCFI 320
           NL AW IRDY QK  A + Y+ +CG  G  C  T+GVLRVSLGCFI
Sbjct: 61  NLCAWFIRDYAQKALALLPYVSSCGPEGSRCFHTLGVLRVSLGCFI 106


>ref|XP_002518169.1| conserved hypothetical protein [Ricinus communis]
           gi|223542765|gb|EEF44302.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 588

 Score = 91.3 bits (225), Expect = 8e-17
 Identities = 44/100 (44%), Positives = 63/100 (63%)
 Frame = +3

Query: 3   MSDPIEAVESIVIEIRPRTSNVVPVKESSLNVEWENFECSTERKKSIHARYVYGFIFLLT 182
           M    ++++   ++IR   S   P +     +E  +   S E+KK + AR+VYG IFL+T
Sbjct: 1   MDQHAQSIKERAVDIRQSHSEA-PQEVLPGQLEANSSNHSQEKKKPLRARFVYGIIFLIT 59

Query: 183 NLMAWLIRDYGQKFFAKINYLKACGVGGLECSRTIGVLRV 302
           NL AW  RDYGQK  ++ NY+KACGV GL+C  T+GVLR+
Sbjct: 60  NLKAWFFRDYGQKVLSQFNYIKACGVDGLDCCHTLGVLRI 99


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