BLASTX nr result
ID: Coptis25_contig00044441
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00044441 (305 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ADN34143.1| copia-type polyprotein [Cucumis melo subsp. melo] 155 2e-36 gb|AAF16534.1|AC013482_8 T26F17.17 [Arabidopsis thaliana] 150 1e-34 gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabi... 150 1e-34 emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana] 150 1e-34 gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thal... 150 1e-34 >gb|ADN34143.1| copia-type polyprotein [Cucumis melo subsp. melo] Length = 238 Score = 155 bits (393), Expect = 2e-36 Identities = 68/95 (71%), Positives = 85/95 (89%) Frame = +1 Query: 19 KKNRTIMNMARSMLKSKKMPRQFWAEAVECATYLLNHNPTKKVWRKTPQESWSGMKPSIH 198 +KNRTI+NMARSMLKSKKMP++FWA+AV+CA YL N +PT+ +W KTPQ++W+G KPSI Sbjct: 57 RKNRTILNMARSMLKSKKMPKEFWAQAVKCAMYLSNRSPTRSLWNKTPQKAWTGRKPSIA 116 Query: 199 HLQVFGCIAYAHIPDQKRTKLDDKSAKYVFIGYDS 303 HL+VFGC+AYAHIP QKR+KLDDKS K VF+GYD+ Sbjct: 117 HLRVFGCMAYAHIPYQKRSKLDDKSEKCVFVGYDA 151 >gb|AAF16534.1|AC013482_8 T26F17.17 [Arabidopsis thaliana] Length = 1291 Score = 150 bits (378), Expect = 1e-34 Identities = 66/95 (69%), Positives = 82/95 (86%) Frame = +1 Query: 19 KKNRTIMNMARSMLKSKKMPRQFWAEAVECATYLLNHNPTKKVWRKTPQESWSGMKPSIH 198 +KNRTI+ MARSMLKSK++P++ WAEAV CA YLLN +PTK V KTPQE+WSG KP + Sbjct: 572 RKNRTILEMARSMLKSKRLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVS 631 Query: 199 HLQVFGCIAYAHIPDQKRTKLDDKSAKYVFIGYDS 303 HL+VFG IA+AH+PD+KR+KLDDKS KY+FIGYD+ Sbjct: 632 HLRVFGSIAHAHVPDEKRSKLDDKSEKYIFIGYDN 666 >gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabidopsis thaliana] gi|12321387|gb|AAG50765.1|AC079131_10 copia-type polyprotein, putative [Arabidopsis thaliana] Length = 1320 Score = 150 bits (378), Expect = 1e-34 Identities = 66/95 (69%), Positives = 82/95 (86%) Frame = +1 Query: 19 KKNRTIMNMARSMLKSKKMPRQFWAEAVECATYLLNHNPTKKVWRKTPQESWSGMKPSIH 198 +KNRTI+ MARSMLKSK++P++ WAEAV CA YLLN +PTK V KTPQE+WSG KP + Sbjct: 633 RKNRTILEMARSMLKSKRLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVS 692 Query: 199 HLQVFGCIAYAHIPDQKRTKLDDKSAKYVFIGYDS 303 HL+VFG IA+AH+PD+KR+KLDDKS KY+FIGYD+ Sbjct: 693 HLRVFGSIAHAHVPDEKRSKLDDKSEKYIFIGYDN 727 >emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana] Length = 1352 Score = 150 bits (378), Expect = 1e-34 Identities = 66/95 (69%), Positives = 82/95 (86%) Frame = +1 Query: 19 KKNRTIMNMARSMLKSKKMPRQFWAEAVECATYLLNHNPTKKVWRKTPQESWSGMKPSIH 198 +KNRTI+ MARSMLKSK++P++ WAEAV CA YLLN +PTK V KTPQE+WSG KP + Sbjct: 633 RKNRTILEMARSMLKSKRLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVS 692 Query: 199 HLQVFGCIAYAHIPDQKRTKLDDKSAKYVFIGYDS 303 HL+VFG IA+AH+PD+KR+KLDDKS KY+FIGYD+ Sbjct: 693 HLRVFGSIAHAHVPDEKRSKLDDKSEKYIFIGYDN 727 >gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thaliana] Length = 1352 Score = 150 bits (378), Expect = 1e-34 Identities = 66/95 (69%), Positives = 82/95 (86%) Frame = +1 Query: 19 KKNRTIMNMARSMLKSKKMPRQFWAEAVECATYLLNHNPTKKVWRKTPQESWSGMKPSIH 198 +KNRTI+ MARSMLKSK++P++ WAEAV CA YLLN +PTK V KTPQE+WSG KP + Sbjct: 633 RKNRTILEMARSMLKSKRLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVS 692 Query: 199 HLQVFGCIAYAHIPDQKRTKLDDKSAKYVFIGYDS 303 HL+VFG IA+AH+PD+KR+KLDDKS KY+FIGYD+ Sbjct: 693 HLRVFGSIAHAHVPDEKRSKLDDKSEKYIFIGYDN 727