BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00044441
         (305 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADN34143.1| copia-type polyprotein [Cucumis melo subsp. melo]      155   2e-36
gb|AAF16534.1|AC013482_8 T26F17.17 [Arabidopsis thaliana]             150   1e-34
gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabi...   150   1e-34
emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]         150   1e-34
gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thal...   150   1e-34

>gb|ADN34143.1| copia-type polyprotein [Cucumis melo subsp. melo]
          Length = 238

 Score =  155 bits (393), Expect = 2e-36
 Identities = 68/95 (71%), Positives = 85/95 (89%)
 Frame = +1

Query: 19  KKNRTIMNMARSMLKSKKMPRQFWAEAVECATYLLNHNPTKKVWRKTPQESWSGMKPSIH 198
           +KNRTI+NMARSMLKSKKMP++FWA+AV+CA YL N +PT+ +W KTPQ++W+G KPSI 
Sbjct: 57  RKNRTILNMARSMLKSKKMPKEFWAQAVKCAMYLSNRSPTRSLWNKTPQKAWTGRKPSIA 116

Query: 199 HLQVFGCIAYAHIPDQKRTKLDDKSAKYVFIGYDS 303
           HL+VFGC+AYAHIP QKR+KLDDKS K VF+GYD+
Sbjct: 117 HLRVFGCMAYAHIPYQKRSKLDDKSEKCVFVGYDA 151


>gb|AAF16534.1|AC013482_8 T26F17.17 [Arabidopsis thaliana]
          Length = 1291

 Score =  150 bits (378), Expect = 1e-34
 Identities = 66/95 (69%), Positives = 82/95 (86%)
 Frame = +1

Query: 19  KKNRTIMNMARSMLKSKKMPRQFWAEAVECATYLLNHNPTKKVWRKTPQESWSGMKPSIH 198
           +KNRTI+ MARSMLKSK++P++ WAEAV CA YLLN +PTK V  KTPQE+WSG KP + 
Sbjct: 572 RKNRTILEMARSMLKSKRLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVS 631

Query: 199 HLQVFGCIAYAHIPDQKRTKLDDKSAKYVFIGYDS 303
           HL+VFG IA+AH+PD+KR+KLDDKS KY+FIGYD+
Sbjct: 632 HLRVFGSIAHAHVPDEKRSKLDDKSEKYIFIGYDN 666


>gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabidopsis thaliana]
           gi|12321387|gb|AAG50765.1|AC079131_10 copia-type
           polyprotein, putative [Arabidopsis thaliana]
          Length = 1320

 Score =  150 bits (378), Expect = 1e-34
 Identities = 66/95 (69%), Positives = 82/95 (86%)
 Frame = +1

Query: 19  KKNRTIMNMARSMLKSKKMPRQFWAEAVECATYLLNHNPTKKVWRKTPQESWSGMKPSIH 198
           +KNRTI+ MARSMLKSK++P++ WAEAV CA YLLN +PTK V  KTPQE+WSG KP + 
Sbjct: 633 RKNRTILEMARSMLKSKRLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVS 692

Query: 199 HLQVFGCIAYAHIPDQKRTKLDDKSAKYVFIGYDS 303
           HL+VFG IA+AH+PD+KR+KLDDKS KY+FIGYD+
Sbjct: 693 HLRVFGSIAHAHVPDEKRSKLDDKSEKYIFIGYDN 727


>emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]
          Length = 1352

 Score =  150 bits (378), Expect = 1e-34
 Identities = 66/95 (69%), Positives = 82/95 (86%)
 Frame = +1

Query: 19  KKNRTIMNMARSMLKSKKMPRQFWAEAVECATYLLNHNPTKKVWRKTPQESWSGMKPSIH 198
           +KNRTI+ MARSMLKSK++P++ WAEAV CA YLLN +PTK V  KTPQE+WSG KP + 
Sbjct: 633 RKNRTILEMARSMLKSKRLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVS 692

Query: 199 HLQVFGCIAYAHIPDQKRTKLDDKSAKYVFIGYDS 303
           HL+VFG IA+AH+PD+KR+KLDDKS KY+FIGYD+
Sbjct: 693 HLRVFGSIAHAHVPDEKRSKLDDKSEKYIFIGYDN 727


>gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thaliana]
          Length = 1352

 Score =  150 bits (378), Expect = 1e-34
 Identities = 66/95 (69%), Positives = 82/95 (86%)
 Frame = +1

Query: 19  KKNRTIMNMARSMLKSKKMPRQFWAEAVECATYLLNHNPTKKVWRKTPQESWSGMKPSIH 198
           +KNRTI+ MARSMLKSK++P++ WAEAV CA YLLN +PTK V  KTPQE+WSG KP + 
Sbjct: 633 RKNRTILEMARSMLKSKRLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVS 692

Query: 199 HLQVFGCIAYAHIPDQKRTKLDDKSAKYVFIGYDS 303
           HL+VFG IA+AH+PD+KR+KLDDKS KY+FIGYD+
Sbjct: 693 HLRVFGSIAHAHVPDEKRSKLDDKSEKYIFIGYDN 727