BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00044438
         (591 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFJ52751.1| NADH dehydrogenase subunit F, partial (chloroplas...   314   8e-84
gb|AFJ52750.1| NADH dehydrogenase subunit F, partial (chloroplas...   314   8e-84
gb|ABU54975.1| NADH dehydrogenase subunit F [Penianthus longifol...   314   8e-84
gb|ABU54958.1| NADH dehydrogenase subunit F [Kolobopetalum leone...   314   8e-84
gb|ABU54947.1| NADH dehydrogenase subunit F [Disciphania killipii]    314   8e-84

>gb|AFJ52751.1| NADH dehydrogenase subunit F, partial (chloroplast) [Borismene
           japurensis]
          Length = 678

 Score =  314 bits (804), Expect = 8e-84
 Identities = 158/195 (81%), Positives = 165/195 (84%)
 Frame = +2

Query: 5   FFAYMSFSNASMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPIAASACQKAFITNR 184
           FFAYMSFSNASMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPIAA+ACQKAF+TNR
Sbjct: 115 FFAYMSFSNASMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPIAANACQKAFVTNR 174

Query: 185 VXXXXXXXXXXXXYWLMGSFEFRDLFEIANNLIDNNGVSSLFLTLCASLLFVGAVAKSAQ 364
           V            YW+ GSFEFRDLFEI NNLIDNNGV+SLFLTLCASLLFVGAVAKSAQ
Sbjct: 175 VGDFGLLLGILGLYWITGSFEFRDLFEIVNNLIDNNGVNSLFLTLCASLLFVGAVAKSAQ 234

Query: 365 FPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLIPLFTAIPYIMNIISFVXXXXXX 544
           FPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARL+PLFT IPY MN+ISFV      
Sbjct: 235 FPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFTIIPYTMNLISFVGIITVL 294

Query: 545 XXXXXXXXQRDIKKS 589
                   QRDIK+S
Sbjct: 295 LGATLALAQRDIKRS 309


>gb|AFJ52750.1| NADH dehydrogenase subunit F, partial (chloroplast) [Aspidocarya
           uvifera]
          Length = 678

 Score =  314 bits (804), Expect = 8e-84
 Identities = 158/195 (81%), Positives = 165/195 (84%)
 Frame = +2

Query: 5   FFAYMSFSNASMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPIAASACQKAFITNR 184
           FFAYMSFSNASMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPIAA+ACQKAF+TNR
Sbjct: 115 FFAYMSFSNASMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPIAANACQKAFVTNR 174

Query: 185 VXXXXXXXXXXXXYWLMGSFEFRDLFEIANNLIDNNGVSSLFLTLCASLLFVGAVAKSAQ 364
           V            YW+ GSFEFRDLFEI NNLIDNNGV+SLFLTLCASLLFVGAVAKSAQ
Sbjct: 175 VGDFGLLLGILGLYWITGSFEFRDLFEIVNNLIDNNGVNSLFLTLCASLLFVGAVAKSAQ 234

Query: 365 FPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLIPLFTAIPYIMNIISFVXXXXXX 544
           FPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARL+PLFT IPY MN+ISFV      
Sbjct: 235 FPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFTIIPYTMNLISFVGIITVL 294

Query: 545 XXXXXXXXQRDIKKS 589
                   QRDIK+S
Sbjct: 295 LGATLALAQRDIKRS 309


>gb|ABU54975.1| NADH dehydrogenase subunit F [Penianthus longifolius]
          Length = 678

 Score =  314 bits (804), Expect = 8e-84
 Identities = 158/195 (81%), Positives = 165/195 (84%)
 Frame = +2

Query: 5   FFAYMSFSNASMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPIAASACQKAFITNR 184
           FFAYMSFSNASMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPIAA+ACQKAF+TNR
Sbjct: 115 FFAYMSFSNASMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPIAANACQKAFVTNR 174

Query: 185 VXXXXXXXXXXXXYWLMGSFEFRDLFEIANNLIDNNGVSSLFLTLCASLLFVGAVAKSAQ 364
           V            YW+ GSFEFRDLFEI NNLIDNNGV+SLFLTLCASLLFVGAVAKSAQ
Sbjct: 175 VGDFGLLLGILGLYWITGSFEFRDLFEIVNNLIDNNGVNSLFLTLCASLLFVGAVAKSAQ 234

Query: 365 FPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLIPLFTAIPYIMNIISFVXXXXXX 544
           FPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARL+PLFT IPY MN+ISFV      
Sbjct: 235 FPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFTIIPYTMNLISFVGIITVL 294

Query: 545 XXXXXXXXQRDIKKS 589
                   QRDIK+S
Sbjct: 295 LGATLALAQRDIKRS 309


>gb|ABU54958.1| NADH dehydrogenase subunit F [Kolobopetalum leonense]
          Length = 678

 Score =  314 bits (804), Expect = 8e-84
 Identities = 158/195 (81%), Positives = 165/195 (84%)
 Frame = +2

Query: 5   FFAYMSFSNASMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPIAASACQKAFITNR 184
           FFAYMSFSNASMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPIAA+ACQKAF+TNR
Sbjct: 115 FFAYMSFSNASMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPIAANACQKAFVTNR 174

Query: 185 VXXXXXXXXXXXXYWLMGSFEFRDLFEIANNLIDNNGVSSLFLTLCASLLFVGAVAKSAQ 364
           V            YW+ GSFEFRDLFEI NNLIDNNGV+SLFLTLCASLLFVGAVAKSAQ
Sbjct: 175 VGDFGLLLGILGLYWITGSFEFRDLFEIVNNLIDNNGVNSLFLTLCASLLFVGAVAKSAQ 234

Query: 365 FPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLIPLFTAIPYIMNIISFVXXXXXX 544
           FPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARL+PLFT IPY MN+ISFV      
Sbjct: 235 FPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFTIIPYTMNLISFVGIITVL 294

Query: 545 XXXXXXXXQRDIKKS 589
                   QRDIK+S
Sbjct: 295 LGATLALAQRDIKRS 309


>gb|ABU54947.1| NADH dehydrogenase subunit F [Disciphania killipii]
          Length = 668

 Score =  314 bits (804), Expect = 8e-84
 Identities = 158/195 (81%), Positives = 165/195 (84%)
 Frame = +2

Query: 5   FFAYMSFSNASMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPIAASACQKAFITNR 184
           FFAYMSFSNASMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPIAA+ACQKAF+TNR
Sbjct: 105 FFAYMSFSNASMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPIAANACQKAFVTNR 164

Query: 185 VXXXXXXXXXXXXYWLMGSFEFRDLFEIANNLIDNNGVSSLFLTLCASLLFVGAVAKSAQ 364
           V            YW+ GSFEFRDLFEI NNLIDNNGV+SLFLTLCASLLFVGAVAKSAQ
Sbjct: 165 VGDFGLLLGILGLYWITGSFEFRDLFEIVNNLIDNNGVNSLFLTLCASLLFVGAVAKSAQ 224

Query: 365 FPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLIPLFTAIPYIMNIISFVXXXXXX 544
           FPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARL+PLFT IPY MN+ISFV      
Sbjct: 225 FPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFTIIPYTMNLISFVGIITVL 284

Query: 545 XXXXXXXXQRDIKKS 589
                   QRDIK+S
Sbjct: 285 LGATLALAQRDIKRS 299