BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00044436
         (438 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321191.1| predicted protein [Populus trichocarpa] gi|2...   161   4e-38
ref|XP_002269904.1| PREDICTED: F-box protein SNE [Vitis vinifera...   158   4e-37
ref|XP_002530225.1| F-box protein SNE, putative [Ricinus communi...   151   5e-35
ref|XP_004140002.1| PREDICTED: F-box protein SNE-like [Cucumis s...   137   7e-31
ref|XP_003544480.1| PREDICTED: F-box protein SNE-like [Glycine max]   135   3e-30

>ref|XP_002321191.1| predicted protein [Populus trichocarpa] gi|222861964|gb|EEE99506.1|
           predicted protein [Populus trichocarpa]
          Length = 153

 Score =  161 bits (408), Expect = 4e-38
 Identities = 90/142 (63%), Positives = 104/142 (73%), Gaps = 8/142 (5%)
 Frame = -2

Query: 404 KKHNIQFCINDHPDILIEILQRLDDRSLSVAACVCRLWCSISRNDSLWESLCF-XXXXXX 228
           K+   +FCINDH DIL+EIL+RLD RSL V+ACVCRLWC+I+RNDSLWE LCF       
Sbjct: 6   KEKRPKFCINDHVDILLEILKRLDGRSLCVSACVCRLWCTIARNDSLWEHLCFRHVSPPP 65

Query: 227 XXXXXXXVLALGGYRRLYMVCLRPVLTRLSRPSL--ELDRVGGVWSRNEVQLSLSLFSVD 54
                  V+ALGGY+RLYMVC+RPVL+RL R  L  + DRV  VW+R+EVQLSLSLF VD
Sbjct: 66  SSGVRPVVVALGGYKRLYMVCVRPVLSRLGRLRLAGDSDRVRRVWTRDEVQLSLSLFCVD 125

Query: 53  YYERLGGRLG-----EASSLMF 3
           YYERL GRLG       SSLMF
Sbjct: 126 YYERL-GRLGGGGDASGSSLMF 146


>ref|XP_002269904.1| PREDICTED: F-box protein SNE [Vitis vinifera]
           gi|147772267|emb|CAN67350.1| hypothetical protein
           VITISV_018090 [Vitis vinifera]
          Length = 170

 Score =  158 bits (400), Expect = 4e-37
 Identities = 91/151 (60%), Positives = 105/151 (69%), Gaps = 11/151 (7%)
 Frame = -2

Query: 422 GPREKKKKHNIQFCINDHPDILIEILQRLDDRSLSVAACVCRLWCSISRNDSLWESLCFX 243
           G  EK+KK   +F IND+ DIL+EIL+RLD RSL VAACVCRLW S++ NDSLWE LCF 
Sbjct: 15  GHGEKEKKP--RFFINDNTDILMEILKRLDGRSLGVAACVCRLWRSVTWNDSLWEHLCFR 72

Query: 242 XXXXXXXXXXXXVLALGGYRRLYMVCLRPVLTRLSRPSLEL---------DRVGGVWSRN 90
                       V+ALGGYRRLYM+CLRPVL+RL +    L         D VG VW+R+
Sbjct: 73  HVSPPPPGVRPVVVALGGYRRLYMMCLRPVLSRLGQMKRGLGGSGGGGDSDLVGRVWTRD 132

Query: 89  EVQLSLSLFSVDYYERLGGRLGEA--SSLMF 3
            VQLSLSLF VDYYERL GRLG+A  SSLMF
Sbjct: 133 SVQLSLSLFCVDYYERLDGRLGDASTSSLMF 163


>ref|XP_002530225.1| F-box protein SNE, putative [Ricinus communis]
           gi|223530272|gb|EEF32172.1| F-box protein SNE, putative
           [Ricinus communis]
          Length = 155

 Score =  151 bits (382), Expect = 5e-35
 Identities = 84/147 (57%), Positives = 102/147 (69%), Gaps = 8/147 (5%)
 Frame = -2

Query: 419 PREKKKKHNIQFCINDHPDILIEILQRLDDRSLSVAACVCRLWCSISRNDSLWESLCFXX 240
           P+  +K+H  +F INDH DIL+EIL+RLD RSL VAACVC LWC+I+RNDSLWE+LCF  
Sbjct: 4   PQPTQKRH--KFSINDHVDILVEILKRLDGRSLGVAACVCNLWCTIARNDSLWENLCFRH 61

Query: 239 XXXXXXXXXXXVL-ALGGYRRLYMVCLRPVLTRLSR-----PSLELDRVGGVWSRNEVQL 78
                      V+ ALGGY+RLYMVC+RPVL++L R        E DR   +W+R+EV+L
Sbjct: 62  VISPPPSGVRPVIVALGGYKRLYMVCVRPVLSQLGRRFRLSSGGESDRARRMWTRDEVEL 121

Query: 77  SLSLFSVDYYERLG--GRLGEASSLMF 3
            LSLF VDYYERL   G    ASSLMF
Sbjct: 122 LLSLFCVDYYERLERIGGYASASSLMF 148


>ref|XP_004140002.1| PREDICTED: F-box protein SNE-like [Cucumis sativus]
           gi|449532669|ref|XP_004173303.1| PREDICTED: F-box
           protein SNE-like [Cucumis sativus]
          Length = 152

 Score =  137 bits (346), Expect = 7e-31
 Identities = 81/145 (55%), Positives = 99/145 (68%), Gaps = 6/145 (4%)
 Frame = -2

Query: 419 PREKKKKHNIQFCINDHPDILIEILQRLDDRSLSVAACVCRLWCSISRNDSLWESLCFXX 240
           P EK++K    F IND+ DILIEIL+RLD  SL VA CVCRLWC+I+R++S+WE +CF  
Sbjct: 9   PNEKRRK----FLINDNLDILIEILKRLDGPSLGVATCVCRLWCTIARSESVWEQVCFRH 64

Query: 239 XXXXXXXXXXXVL-ALGGYRRLYMVCLRPVLTRLSRPSLELDRVGGVWSRNEVQLSLSLF 63
                      V+ ALGGY+RLYMV +RPVL+RL       D V  VW+++EVQLSLSLF
Sbjct: 65  VKSPLPSSVKTVVAALGGYKRLYMVSIRPVLSRLGYS----DLVRRVWTQDEVQLSLSLF 120

Query: 62  SVDYYERL--GGRLG---EASSLMF 3
            VDYYERL   GR+G    A SLMF
Sbjct: 121 CVDYYERLTGSGRIGGEASALSLMF 145


>ref|XP_003544480.1| PREDICTED: F-box protein SNE-like [Glycine max]
          Length = 154

 Score =  135 bits (340), Expect = 3e-30
 Identities = 83/144 (57%), Positives = 99/144 (68%), Gaps = 6/144 (4%)
 Frame = -2

Query: 416 REKKKKHNIQFCINDHPDILIEILQRLDDRSLSVAACVCRLWCSISRN-DSLWESLCF-X 243
           RE++K+   +F IND+ DIL EIL+RLD  SL VAACVCRLWCS++RN DSLWE LCF  
Sbjct: 9   REQEKRP--RFFINDNIDILREILKRLDGPSLGVAACVCRLWCSLTRNDDSLWEHLCFRH 66

Query: 242 XXXXXXXXXXXXVLALGGYRRLYMVCLRPVLTRLSRPSLELDRVGGVWSRNEVQLSLSLF 63
                       V+ALGGY+RLYMVC+RPVL+RL        R   VW+R+EVQLSLSLF
Sbjct: 67  VSSPPTASVRAVVVALGGYKRLYMVCVRPVLSRLGNSERVRKR---VWTRHEVQLSLSLF 123

Query: 62  SVDYYERL-GGRL---GEASSLMF 3
            +D YERL  GR+     ASSLMF
Sbjct: 124 CIDSYERLESGRIPSDASASSLMF 147