BLASTX nr result

ID: Coptis25_contig00044417 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00044417
         (326 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527423.1| multidrug resistance-associated protein 1, 3...    63   3e-08
ref|XP_002276212.2| PREDICTED: ABC transporter C family member 8...    61   1e-07
ref|XP_002276193.2| PREDICTED: ABC transporter C family member 8...    61   1e-07
ref|XP_003531625.1| PREDICTED: ABC transporter C family member 8...    61   1e-07
emb|CBI35971.3| unnamed protein product [Vitis vinifera]               61   1e-07

>ref|XP_002527423.1| multidrug resistance-associated protein 1, 3 (mrp1, 3),
           abc-transoprter, putative [Ricinus communis]
           gi|223533233|gb|EEF34989.1| multidrug
           resistance-associated protein 1, 3 (mrp1, 3),
           abc-transoprter, putative [Ricinus communis]
          Length = 1475

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 31/96 (32%), Positives = 54/96 (56%)
 Frame = +2

Query: 29  SWVVNVVRGLTWISLSVSLISQRSQGSKIVILIWWVVSASLGFAINLEVIVRSDAIPVXX 208
           SW+V +VRG+ WIS++VSL+  RS+ ++I++ +WWV  + L  A+N+E++ R+++I V  
Sbjct: 106 SWLVYLVRGIIWISVAVSLLVTRSRWNRILVTVWWVSFSLLASALNIEILARANSIQVLD 165

Query: 209 XXXXXXXXXXXXXXXXXXXXXVSRNSFGQKLLEPLL 316
                                 S+ +  + L EPLL
Sbjct: 166 ILPWPVNFLLLLCALRNFSHFSSQQASYKNLFEPLL 201


>ref|XP_002276212.2| PREDICTED: ABC transporter C family member 8-like [Vitis vinifera]
          Length = 1469

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 35/104 (33%), Positives = 54/104 (51%)
 Frame = +2

Query: 11  DGSSRTSWVVNVVRGLTWISLSVSLISQRSQGSKIVILIWWVVSASLGFAINLEVIVRSD 190
           +G   +SW V  VRGL WISL+VSL+ QRS+ ++I+  IWW+    L  A+N+E+IV + 
Sbjct: 93  EGPRLSSWPVYFVRGLIWISLTVSLLVQRSKWTRILSSIWWMSFFLLVSALNIEIIVETH 152

Query: 191 AIPVXXXXXXXXXXXXXXXXXXXXXXXVSRNSFGQKLLEPLLNK 322
           +I +                       +S  +  + + EPLL K
Sbjct: 153 SIQIFVMVPWLVNFLLLFCAFRNICPSLSLEASDKSVSEPLLAK 196


>ref|XP_002276193.2| PREDICTED: ABC transporter C family member 8-like [Vitis vinifera]
          Length = 1462

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 27/63 (42%), Positives = 43/63 (68%)
 Frame = +2

Query: 14  GSSRTSWVVNVVRGLTWISLSVSLISQRSQGSKIVILIWWVVSASLGFAINLEVIVRSDA 193
           GS    W+V  VRGLTWISL+VSL+ + S+ S+I+  +WW+   SL   +N+E++V++  
Sbjct: 94  GSQPLGWLVYFVRGLTWISLAVSLLVRSSKWSRILSFLWWLTFFSLVSTLNIEILVKTHN 153

Query: 194 IPV 202
           I +
Sbjct: 154 IKI 156


>ref|XP_003531625.1| PREDICTED: ABC transporter C family member 8-like [Glycine max]
          Length = 1465

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 34/105 (32%), Positives = 52/105 (49%)
 Frame = +2

Query: 11  DGSSRTSWVVNVVRGLTWISLSVSLISQRSQGSKIVILIWWVVSASLGFAINLEVIVRSD 190
           D S + +W+  +VRG  W SL+VSL+ QR +  KI+  +WW  S  L   +N+E++ +  
Sbjct: 93  DNSKQLNWLACIVRGFIWTSLAVSLLVQRLKWIKILNSVWWACSCVLASVLNIEILFKKQ 152

Query: 191 AIPVXXXXXXXXXXXXXXXXXXXXXXXVSRNSFGQKLLEPLLNKE 325
           AI +                       VS+ S  Q L EPLL++E
Sbjct: 153 AIEIFDIIQWFLHFLLLFCAFQNLGYFVSQ-SVPQSLSEPLLDQE 196


>emb|CBI35971.3| unnamed protein product [Vitis vinifera]
          Length = 2772

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 27/63 (42%), Positives = 43/63 (68%)
 Frame = +2

Query: 14  GSSRTSWVVNVVRGLTWISLSVSLISQRSQGSKIVILIWWVVSASLGFAINLEVIVRSDA 193
           GS    W+V  VRGLTWISL+VSL+ + S+ S+I+  +WW+   SL   +N+E++V++  
Sbjct: 116 GSQPLGWLVYFVRGLTWISLAVSLLVRSSKWSRILSFLWWLTFFSLVSTLNIEILVKTHN 175

Query: 194 IPV 202
           I +
Sbjct: 176 IKI 178



 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 35/104 (33%), Positives = 54/104 (51%)
 Frame = +2

Query: 11   DGSSRTSWVVNVVRGLTWISLSVSLISQRSQGSKIVILIWWVVSASLGFAINLEVIVRSD 190
            +G   +SW V  VRGL WISL+VSL+ QRS+ ++I+  IWW+    L  A+N+E+IV + 
Sbjct: 1609 EGPRLSSWPVYFVRGLIWISLTVSLLVQRSKWTRILSSIWWMSFFLLVSALNIEIIVETH 1668

Query: 191  AIPVXXXXXXXXXXXXXXXXXXXXXXXVSRNSFGQKLLEPLLNK 322
            +I +                       +S  +  + + EPLL K
Sbjct: 1669 SIQIFVMVPWLVNFLLLFCAFRNICPSLSLEASDKSVSEPLLAK 1712


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