BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00044416
         (469 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22748.3| unnamed protein product [Vitis vinifera]              274   6e-72
ref|XP_002268211.1| PREDICTED: pentatricopeptide repeat-containi...   274   6e-72
ref|XP_003535615.1| PREDICTED: pentatricopeptide repeat-containi...   268   3e-70
gb|EAY79137.1| hypothetical protein OsI_34244 [Oryza sativa Indi...   264   5e-69
ref|XP_003571952.1| PREDICTED: pentatricopeptide repeat-containi...   264   6e-69

>emb|CBI22748.3| unnamed protein product [Vitis vinifera]
          Length = 518

 Score =  274 bits (700), Expect = 6e-72
 Identities = 123/155 (79%), Positives = 146/155 (94%)
 Frame = +2

Query: 2   HSFNAILHSLLVIHQYRLVEWVYQQMVLEGHSPDILTYNVLMCTKYRLGKLDQFHRLLDD 181
           HS+NAILH LL + QY+LVEWVYQQM+LE +SPDILTYN++MCTKYRLGKLDQFHRLL++
Sbjct: 264 HSYNAILHCLLCLKQYKLVEWVYQQMLLEDYSPDILTYNIVMCTKYRLGKLDQFHRLLEE 323

Query: 182 MCKNGFSPDLHTYNILLHVLGEGDKPLAALNLMNHMKEVGCEPRVIHFTSLIDGLSRAGN 361
           +  NGFSPD HT+NILLH+LG+G+KPLAAL+L+NHMKEVG +P V+HFT+LIDGLSRAGN
Sbjct: 324 LGTNGFSPDFHTFNILLHLLGKGNKPLAALDLLNHMKEVGFDPSVLHFTTLIDGLSRAGN 383

Query: 362 LEACKYFFDEMVKIGCMPDVVCYTVMITGYVVAGE 466
           L+ACKYFFDEM+K+GCMPDVVCYTVMITGY+VAGE
Sbjct: 384 LDACKYFFDEMIKLGCMPDVVCYTVMITGYIVAGE 418



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 30/116 (25%), Positives = 57/116 (49%)
 Frame = +2

Query: 59  EWVYQQMVLEGHSPDILTYNVLMCTKYRLGKLDQFHRLLDDMCKNGFSPDLHTYNILLHV 238
           ++ + +M+  G  PD++ Y V++      G+L+    L ++M   G  P++ TYN ++  
Sbjct: 388 KYFFDEMIKLGCMPDVVCYTVMITGYIVAGELEMAQGLFEEMTVKGQLPNVFTYNSMIRG 447

Query: 239 LGEGDKPLAALNLMNHMKEVGCEPRVIHFTSLIDGLSRAGNLEACKYFFDEMVKIG 406
           L   +K   A +++  M+  GC P  + + +L+  L  AG L+        MV  G
Sbjct: 448 LCMAEKFEEARSMLKEMESRGCNPNFLVYNTLVGNLRNAGKLKEAHEVIRHMVDKG 503


>ref|XP_002268211.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g55630-like [Vitis vinifera]
          Length = 514

 Score =  274 bits (700), Expect = 6e-72
 Identities = 123/155 (79%), Positives = 146/155 (94%)
 Frame = +2

Query: 2   HSFNAILHSLLVIHQYRLVEWVYQQMVLEGHSPDILTYNVLMCTKYRLGKLDQFHRLLDD 181
           HS+NAILH LL + QY+LVEWVYQQM+LE +SPDILTYN++MCTKYRLGKLDQFHRLL++
Sbjct: 260 HSYNAILHCLLCLKQYKLVEWVYQQMLLEDYSPDILTYNIVMCTKYRLGKLDQFHRLLEE 319

Query: 182 MCKNGFSPDLHTYNILLHVLGEGDKPLAALNLMNHMKEVGCEPRVIHFTSLIDGLSRAGN 361
           +  NGFSPD HT+NILLH+LG+G+KPLAAL+L+NHMKEVG +P V+HFT+LIDGLSRAGN
Sbjct: 320 LGTNGFSPDFHTFNILLHLLGKGNKPLAALDLLNHMKEVGFDPSVLHFTTLIDGLSRAGN 379

Query: 362 LEACKYFFDEMVKIGCMPDVVCYTVMITGYVVAGE 466
           L+ACKYFFDEM+K+GCMPDVVCYTVMITGY+VAGE
Sbjct: 380 LDACKYFFDEMIKLGCMPDVVCYTVMITGYIVAGE 414



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 30/116 (25%), Positives = 57/116 (49%)
 Frame = +2

Query: 59  EWVYQQMVLEGHSPDILTYNVLMCTKYRLGKLDQFHRLLDDMCKNGFSPDLHTYNILLHV 238
           ++ + +M+  G  PD++ Y V++      G+L+    L ++M   G  P++ TYN ++  
Sbjct: 384 KYFFDEMIKLGCMPDVVCYTVMITGYIVAGELEMAQGLFEEMTVKGQLPNVFTYNSMIRG 443

Query: 239 LGEGDKPLAALNLMNHMKEVGCEPRVIHFTSLIDGLSRAGNLEACKYFFDEMVKIG 406
           L   +K   A +++  M+  GC P  + + +L+  L  AG L+        MV  G
Sbjct: 444 LCMAEKFEEARSMLKEMESRGCNPNFLVYNTLVGNLRNAGKLKEAHEVIRHMVDKG 499


>ref|XP_003535615.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g60050-like [Glycine max]
          Length = 480

 Score =  268 bits (685), Expect = 3e-70
 Identities = 122/155 (78%), Positives = 144/155 (92%)
 Frame = +2

Query: 2   HSFNAILHSLLVIHQYRLVEWVYQQMVLEGHSPDILTYNVLMCTKYRLGKLDQFHRLLDD 181
           HS+NAILH LLV++QY+L+EWVYQQ++L+G S DILTYN++M  KYRLGKLDQFHRLLD+
Sbjct: 227 HSYNAILHGLLVLNQYKLIEWVYQQLLLDGFSSDILTYNIVMYAKYRLGKLDQFHRLLDE 286

Query: 182 MCKNGFSPDLHTYNILLHVLGEGDKPLAALNLMNHMKEVGCEPRVIHFTSLIDGLSRAGN 361
           M +NGFSPD HT+NILLHVLG+GDKPLAALNL+NHM+E+G EP V+HFT+LIDGLSRAGN
Sbjct: 287 MGRNGFSPDFHTFNILLHVLGKGDKPLAALNLLNHMREMGIEPTVLHFTTLIDGLSRAGN 346

Query: 362 LEACKYFFDEMVKIGCMPDVVCYTVMITGYVVAGE 466
           L+ACKYFFDEM+K GC+PDVV YTVMITGYVVAGE
Sbjct: 347 LDACKYFFDEMIKNGCIPDVVAYTVMITGYVVAGE 381


>gb|EAY79137.1| hypothetical protein OsI_34244 [Oryza sativa Indica Group]
          Length = 508

 Score =  264 bits (675), Expect = 5e-69
 Identities = 121/156 (77%), Positives = 141/156 (90%)
 Frame = +2

Query: 2   HSFNAILHSLLVIHQYRLVEWVYQQMVLEGHSPDILTYNVLMCTKYRLGKLDQFHRLLDD 181
           +SFNAILH+LL I QY L+EWV+Q+M+ EGHSPD+LTYNV+M  KY LGKL+QFH+LLD+
Sbjct: 254 NSFNAILHTLLTIEQYSLIEWVHQKMIAEGHSPDVLTYNVVMRAKYMLGKLNQFHKLLDE 313

Query: 182 MCKNGFSPDLHTYNILLHVLGEGDKPLAALNLMNHMKEVGCEPRVIHFTSLIDGLSRAGN 361
           M KNG +PDL+TYN+LLHVLG+GDKPLAALNL+N+M +VGC P V+HFT+LIDGLSRAGN
Sbjct: 314 MGKNGLAPDLYTYNLLLHVLGKGDKPLAALNLLNYMSDVGCVPTVLHFTNLIDGLSRAGN 373

Query: 362 LEACKYFFDEMVKIGCMPDVVCYTVMITGYVVAGEF 469
           LEACKYFFDEMVK GC PDVVCYTVMITGYV AGEF
Sbjct: 374 LEACKYFFDEMVKKGCQPDVVCYTVMITGYVAAGEF 409


>ref|XP_003571952.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g55630-like [Brachypodium distachyon]
          Length = 501

 Score =  264 bits (674), Expect = 6e-69
 Identities = 121/155 (78%), Positives = 140/155 (90%)
 Frame = +2

Query: 2   HSFNAILHSLLVIHQYRLVEWVYQQMVLEGHSPDILTYNVLMCTKYRLGKLDQFHRLLDD 181
           +SFNAILH+LL I QY L+EWV+Q+M++EGHSPD+LTYN++M  KY LGKLDQFHRLLD+
Sbjct: 247 NSFNAILHTLLTIEQYSLIEWVHQKMLMEGHSPDVLTYNIVMRAKYMLGKLDQFHRLLDE 306

Query: 182 MCKNGFSPDLHTYNILLHVLGEGDKPLAALNLMNHMKEVGCEPRVIHFTSLIDGLSRAGN 361
           M KNG +PDLHTYNILLHVLG+GDKPLAALNL+N+M +VGC P V+HFT+LIDGLSRAGN
Sbjct: 307 MGKNGLTPDLHTYNILLHVLGKGDKPLAALNLLNYMSDVGCVPSVLHFTNLIDGLSRAGN 366

Query: 362 LEACKYFFDEMVKIGCMPDVVCYTVMITGYVVAGE 466
           LEACKYFFDEM+K GC PDVVCYTVMITGYV A E
Sbjct: 367 LEACKYFFDEMMKKGCEPDVVCYTVMITGYVAAAE 401