BLASTX nr result

ID: Coptis25_contig00044411 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00044411
         (515 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632560.1| PREDICTED: uncharacterized protein LOC100854...   122   2e-26
ref|XP_002322766.1| predicted protein [Populus trichocarpa] gi|2...    94   9e-18
ref|XP_002524097.1| conserved hypothetical protein [Ricinus comm...    93   2e-17
ref|XP_002309265.1| predicted protein [Populus trichocarpa] gi|2...    92   4e-17
ref|NP_566965.1| uncharacterized protein [Arabidopsis thaliana] ...    86   4e-15

>ref|XP_003632560.1| PREDICTED: uncharacterized protein LOC100854533 [Vitis vinifera]
           gi|296089347|emb|CBI39119.3| unnamed protein product
           [Vitis vinifera]
          Length = 120

 Score =  122 bits (307), Expect = 2e-26
 Identities = 67/117 (57%), Positives = 87/117 (74%), Gaps = 4/117 (3%)
 Frame = -2

Query: 514 VFAVSGSVVLVAMQLHKRLLSDFMKKVESELGAVEKYQPKRRVRFADDVLEPSSNNKEYR 335
           VFAVSGS VL+A+QLHKRLLSDFMKK+ESE+G    YQ K++VRFA+ V+EPSSNNKEYR
Sbjct: 14  VFAVSGSAVLIALQLHKRLLSDFMKKIESEIGGSGNYQAKKKVRFAETVVEPSSNNKEYR 73

Query: 334 MRH----SRLGAVFDQTPANLEELEDEMKENMPPNRRALYEGITKYRAALKGHTALN 176
           ++H    +R G V     A+++++ED     MP NRR LY+GI +Y+ AL+GH   N
Sbjct: 74  LKHTAKAARAGGV-----ASMKKMEDA----MPLNRRILYKGIIEYK-ALRGHCVSN 120


>ref|XP_002322766.1| predicted protein [Populus trichocarpa] gi|222867396|gb|EEF04527.1|
           predicted protein [Populus trichocarpa]
          Length = 99

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 48/65 (73%), Positives = 56/65 (86%), Gaps = 1/65 (1%)
 Frame = -2

Query: 511 FAVSGSVVLVAMQLHKRLLSDFMKKVESEL-GAVEKYQPKRRVRFADDVLEPSSNNKEYR 335
           FAVSGSVVL+A Q+HKRLLSDFMKK+E EL G+    Q ++RVRFADDVLEPSSNNKEYR
Sbjct: 13  FAVSGSVVLIARQVHKRLLSDFMKKMEFELAGSRRSCQDRKRVRFADDVLEPSSNNKEYR 72

Query: 334 MRHSR 320
            RH++
Sbjct: 73  KRHTK 77


>ref|XP_002524097.1| conserved hypothetical protein [Ricinus communis]
           gi|223536665|gb|EEF38307.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 145

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 57/122 (46%), Positives = 78/122 (63%), Gaps = 15/122 (12%)
 Frame = -2

Query: 511 FAVSGSVVLVAMQLHKRLLSDFMKKVESELG------AVEKYQPKRRVRFADDVLEPSSN 350
           FAVSGSVVL+A Q+HKRL+SDFMKK+E EL       +    Q K+RVRFA++V+EPS N
Sbjct: 18  FAVSGSVVLIARQVHKRLVSDFMKKIECELMGRRLSLSSSSCQEKKRVRFAENVIEPSGN 77

Query: 349 NKEYRMRHSRLGAVFDQTPANLEELE---------DEMKENMPPNRRALYEGITKYRAAL 197
           NKEYR ++    +  D     +E+++          ++ E MP NR+ LY+GI +YR  L
Sbjct: 78  NKEYRNKNLVRISEGDNVLKIMEDVKINQRNYGHGAKLMEAMPLNRQVLYKGILEYR-TL 136

Query: 196 KG 191
           KG
Sbjct: 137 KG 138


>ref|XP_002309265.1| predicted protein [Populus trichocarpa] gi|222855241|gb|EEE92788.1|
           predicted protein [Populus trichocarpa]
          Length = 89

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 49/76 (64%), Positives = 59/76 (77%), Gaps = 1/76 (1%)
 Frame = -2

Query: 511 FAVSGSVVLVAMQLHKRLLSDFMKKVESEL-GAVEKYQPKRRVRFADDVLEPSSNNKEYR 335
           FAVSGS+VL+A QLHKRLLSDFMK++E EL G+    Q K+RVRFADDV+EPSSNNKEYR
Sbjct: 13  FAVSGSLVLIARQLHKRLLSDFMKQMEFELRGSRRSCQDKKRVRFADDVMEPSSNNKEYR 72

Query: 334 MRHSRLGAVFDQTPAN 287
            R  ++  V +Q   N
Sbjct: 73  RRRIKITKVNNQVIEN 88


>ref|NP_566965.1| uncharacterized protein [Arabidopsis thaliana]
           gi|10045569|emb|CAC07927.1| putative protein
           [Arabidopsis thaliana] gi|17380698|gb|AAL36179.1|
           unknown protein [Arabidopsis thaliana]
           gi|20259005|gb|AAM14218.1| unknown protein [Arabidopsis
           thaliana] gi|21592686|gb|AAM64635.1| unknown
           [Arabidopsis thaliana] gi|332645417|gb|AEE78938.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 86

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 43/64 (67%), Positives = 50/64 (78%)
 Frame = -2

Query: 514 VFAVSGSVVLVAMQLHKRLLSDFMKKVESELGAVEKYQPKRRVRFADDVLEPSSNNKEYR 335
           VFAVSGSVV +A Q HKRLLSD+M K E E+ A +K   K++VRFA DV+EPS NNKEYR
Sbjct: 10  VFAVSGSVVFLASQFHKRLLSDYMDKFEFEIRAQKKMVMKKKVRFAADVVEPSGNNKEYR 69

Query: 334 MRHS 323
            RHS
Sbjct: 70  RRHS 73


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