BLASTX nr result

ID: Coptis25_contig00044396 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00044396
         (645 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN75759.1| hypothetical protein VITISV_017339 [Vitis vinifera]    80   2e-13
ref|XP_002277749.2| PREDICTED: uncharacterized protein LOC100264...    79   9e-13
emb|CBI33696.3| unnamed protein product [Vitis vinifera]               79   9e-13
ref|XP_002303400.1| predicted protein [Populus trichocarpa] gi|2...    76   6e-12
ref|XP_003562278.1| PREDICTED: uncharacterized protein LOC100828...    71   2e-10

>emb|CAN75759.1| hypothetical protein VITISV_017339 [Vitis vinifera]
          Length = 1268

 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 64/234 (27%), Positives = 93/234 (39%), Gaps = 45/234 (19%)
 Frame = -1

Query: 567  GKKNE-----KSDSSRYLTKGDVLQSSLNHLFGCTKRLFTESESGDL------------- 442
            G KNE     +S S        VL+ ++ HLF C ++LF   ++G               
Sbjct: 845  GAKNEGFHFSRSSSLEASDINTVLEQTMYHLFSCIEKLFQAGDAGKSSKLPSERKKDHKK 904

Query: 441  --------------------------PLTXXXXXXXXXXXXCDKKFMLNMLKMATEVLKF 340
                                      P T             + K + N++KM T VLKF
Sbjct: 905  AANSCRQKLREPQTDPCSTSDGGHAQPQTDPSSTSDGGTTFSEPKRISNVMKMLTAVLKF 964

Query: 339  VVDANMVSPIFDNQGTCLQFASAYLQVIIPTLRKHCHD-ISLLHEDMKGTLLCLKSSFTY 163
            +VDA  +  +  N G  L+F + Y+Q  I  +R+H  D +    +D++GT LCLKSS TY
Sbjct: 965  IVDAATMR-LVSNDGRFLKFTTIYIQYTISIIRQHSQDQLQFNDDDLRGTFLCLKSSLTY 1023

Query: 162  AAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVSIESYFGSRNAISLVPAVKP 1
             AK                             ++S+ESY GS  A+ LV A+KP
Sbjct: 1024 TAKFLNLVLANTNEASTPPPEAYNLANYLLDLIISVESYLGSVYAVRLVTALKP 1077


>ref|XP_002277749.2| PREDICTED: uncharacterized protein LOC100264215 [Vitis vinifera]
          Length = 1295

 Score = 78.6 bits (192), Expect = 9e-13
 Identities = 47/132 (35%), Positives = 68/132 (51%), Gaps = 1/132 (0%)
 Frame = -1

Query: 393  DKKFMLNMLKMATEVLKFVVDANMVSPIFDNQGTCLQFASAYLQVIIPTLRKHCHD-ISL 217
            + K + N++KM T VLKF+VDA  +  +  N G  L+F + Y+Q  I  +R+H  D +  
Sbjct: 974  EPKRISNVMKMLTAVLKFIVDAATMR-LVSNDGRFLKFTTIYIQYTISIIRQHSQDQLQF 1032

Query: 216  LHEDMKGTLLCLKSSFTYAAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVSIESYFGS 37
              +D++GT LCLKSS TY AK                             ++S+ESY GS
Sbjct: 1033 NDDDLRGTFLCLKSSLTYTAKFLNLVLANTNEASTPPPEAYNLANYLLDLIISVESYLGS 1092

Query: 36   RNAISLVPAVKP 1
              A+ LV A+KP
Sbjct: 1093 VYAVRLVTALKP 1104


>emb|CBI33696.3| unnamed protein product [Vitis vinifera]
          Length = 848

 Score = 78.6 bits (192), Expect = 9e-13
 Identities = 47/132 (35%), Positives = 68/132 (51%), Gaps = 1/132 (0%)
 Frame = -1

Query: 393 DKKFMLNMLKMATEVLKFVVDANMVSPIFDNQGTCLQFASAYLQVIIPTLRKHCHD-ISL 217
           + K + N++KM T VLKF+VDA  +  +  N G  L+F + Y+Q  I  +R+H  D +  
Sbjct: 527 EPKRISNVMKMLTAVLKFIVDAATMR-LVSNDGRFLKFTTIYIQYTISIIRQHSQDQLQF 585

Query: 216 LHEDMKGTLLCLKSSFTYAAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVSIESYFGS 37
             +D++GT LCLKSS TY AK                             ++S+ESY GS
Sbjct: 586 NDDDLRGTFLCLKSSLTYTAKFLNLVLANTNEASTPPPEAYNLANYLLDLIISVESYLGS 645

Query: 36  RNAISLVPAVKP 1
             A+ LV A+KP
Sbjct: 646 VYAVRLVTALKP 657


>ref|XP_002303400.1| predicted protein [Populus trichocarpa] gi|222840832|gb|EEE78379.1|
            predicted protein [Populus trichocarpa]
          Length = 1219

 Score = 75.9 bits (185), Expect = 6e-12
 Identities = 59/193 (30%), Positives = 83/193 (43%), Gaps = 1/193 (0%)
 Frame = -1

Query: 579  NDLRGKKNEKSDSSRYLTKGDVLQSSLNHLFGCTKRLFTESESGDLPLTXXXXXXXXXXX 400
            ND   K +E +DSS       +L++SL+HL  C  +L  E   G+               
Sbjct: 843  NDSGSKNSEGTDSS------SILEASLDHLLNCIDKLLGEVNIGETQADASISNDDGSLS 896

Query: 399  XCDKKFMLNMLKMATEVLKFVVDANMVSPIFDNQGTCLQFASAYLQVIIPTLRKHCHD-I 223
              ++  M N +KM T VLK +VD+  +  +    G CL F SAYL+ II  L     + +
Sbjct: 897  TKERG-MSNKVKMLTAVLKLIVDSIAMGLLSRIHGRCLNFTSAYLKHIIFALEHQSSEKL 955

Query: 222  SLLHEDMKGTLLCLKSSFTYAAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVSIESYF 43
                +++K   LCLKSSF+YAAK                             + SIE + 
Sbjct: 956  QFKEDELKDFFLCLKSSFSYAAKLLNLILRDTSETSPLLPEAFDLVNDMLDLITSIELHL 1015

Query: 42   GSRNAISLVPAVK 4
            GS  A  LV A K
Sbjct: 1016 GSGFAAGLVAAAK 1028


>ref|XP_003562278.1| PREDICTED: uncharacterized protein LOC100828868 isoform 1
            [Brachypodium distachyon]
          Length = 1191

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 46/184 (25%), Positives = 83/184 (45%), Gaps = 9/184 (4%)
 Frame = -1

Query: 528  TKGDVLQSSLNHLFGCTKRLF--TESESGDLPLTXXXXXXXXXXXXCDKKFM-------L 376
            ++   +  SL+HL  C  +L   + S S +   T             D  F        +
Sbjct: 828  SESTTVNQSLDHLLKCYDKLLNGSVSVSANSSSTLNTNKKSAKHKHHDALFAGNAVKGTI 887

Query: 375  NMLKMATEVLKFVVDANMVSPIFDNQGTCLQFASAYLQVIIPTLRKHCHDISLLHEDMKG 196
            N++ + T +LKF+VD   +  + D++  C++FAS+Y +  +  + +H    S + +D+K 
Sbjct: 888  NVIMLGTSILKFIVDTTTIKLVNDSKVRCVKFASSYTKYAVSAMERHHESSSFMGDDLKD 947

Query: 195  TLLCLKSSFTYAAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVSIESYFGSRNAISLV 16
             L+ ++SSF+YAAK                             + S+ES+ GSR +++LV
Sbjct: 948  ILILIRSSFSYAAKLLHLVLANSTESSSPPEEAFLLANNLLDLVPSVESFAGSRFSLTLV 1007

Query: 15   PAVK 4
              VK
Sbjct: 1008 SVVK 1011


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