BLASTX nr result
ID: Coptis25_contig00044377
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00044377 (365 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAB42059.1| Tpv2-1c [Phaseolus vulgaris] 120 9e-26 gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum ... 119 3e-25 gb|ABW74566.1| integrase [Boechera divaricarpa] 117 1e-24 gb|AAL58228.1|AC084762_2 putative gag-pol polyprotein [Oryza sat... 116 2e-24 emb|CAN63536.1| hypothetical protein VITISV_002860 [Vitis vinifera] 116 2e-24 >emb|CAB42059.1| Tpv2-1c [Phaseolus vulgaris] Length = 374 Score = 120 bits (302), Expect = 9e-26 Identities = 62/119 (52%), Positives = 82/119 (68%) Frame = -3 Query: 360 LYTKKNS*GEILIASIYVDDLIFIGDGVRMFQGFKRCMMQTFEMTNLGLPHFFLRIEVEQ 181 LY K N G ++ ++YVDDLIF+G+ M + FK M + FEMT+LGL FFL +EV Q Sbjct: 44 LYAKNNG-GNMIFVALYVDDLIFMGNNNDMIEEFKGTMRREFEMTDLGLMKFFLGLEVRQ 102 Query: 180 KEDGIVVSQKKYTKELLERFRMENATPISTPMDVGLKLSISDGKLMVNPKLYQSLVGGL 4 KE GI VSQ+KY KE+L++++MEN P+S PM+ G KLS DG V+ Y+SLVG L Sbjct: 103 KETGIFVSQEKYAKEILKKYKMENCNPVSIPMEPGAKLSKFDGGERVDASRYRSLVGSL 161 >gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum demissum] Length = 1333 Score = 119 bits (298), Expect = 3e-25 Identities = 59/120 (49%), Positives = 82/120 (68%) Frame = -3 Query: 363 TLYTKKNS*GEILIASIYVDDLIFIGDGVRMFQGFKRCMMQTFEMTNLGLPHFFLRIEVE 184 TLY KK E L+ +YVDD+I+IG + FK MM+ FEM++LGL +FL +EV Sbjct: 996 TLYLKKQGTDEFLLVCLYVDDMIYIGSSKSLVNDFKSNMMRNFEMSDLGLLKYFLGLEVI 1055 Query: 183 QKEDGIVVSQKKYTKELLERFRMENATPISTPMDVGLKLSISDGKLMVNPKLYQSLVGGL 4 Q +DGI +SQKKY ++LL++F+M N +TPM++ KL +DG NPKL++SLVGGL Sbjct: 1056 QDKDGIFISQKKYAEDLLKKFQMMNCEVATTPMNINEKLQRADGTEKANPKLFRSLVGGL 1115 >gb|ABW74566.1| integrase [Boechera divaricarpa] Length = 1165 Score = 117 bits (292), Expect = 1e-24 Identities = 58/121 (47%), Positives = 79/121 (65%) Frame = -3 Query: 363 TLYTKKNS*GEILIASIYVDDLIFIGDGVRMFQGFKRCMMQTFEMTNLGLPHFFLRIEVE 184 TLY KK G+IL+ +YVDD+I++G + FK MM+ FEMT+LGL +FFL +EV+ Sbjct: 827 TLYIKKQGAGDILVVCLYVDDMIYMGSSASLVSEFKASMMEKFEMTDLGLLYFFLGLEVK 886 Query: 183 QKEDGIVVSQKKYTKELLERFRMENATPISTPMDVGLKLSISDGKLMVNPKLYQSLVGGL 4 Q EDG+ VSQ KY +LL+RF M + TPM+V KL DG + ++SLVGGL Sbjct: 887 QVEDGVFVSQHKYACDLLKRFDMAGCNAVETPMNVNEKLLAGDGTEKADATKFRSLVGGL 946 Query: 3 V 1 + Sbjct: 947 I 947 >gb|AAL58228.1|AC084762_2 putative gag-pol polyprotein [Oryza sativa Japonica Group] gi|108708461|gb|ABF96256.1| retrotransposon protein, putative, unclassified [Oryza sativa Japonica Group] Length = 1167 Score = 116 bits (291), Expect = 2e-24 Identities = 57/121 (47%), Positives = 84/121 (69%) Frame = -3 Query: 363 TLYTKKNS*GEILIASIYVDDLIFIGDGVRMFQGFKRCMMQTFEMTNLGLPHFFLRIEVE 184 TLY K +ILI S+YVDDLI+ G+ +M Q FKR MM T+EM++LGL H+FL +EV Sbjct: 855 TLYINKTG-TDILIVSLYVDDLIYTGNSEKMMQDFKRDMMHTYEMSDLGLLHYFLGMEVH 913 Query: 183 QKEDGIVVSQKKYTKELLERFRMENATPISTPMDVGLKLSISDGKLMVNPKLYQSLVGGL 4 Q ++GI +SQ+KY + +L++F+M+N ++TP+ K DG V+P +Y+SLVG L Sbjct: 914 QSDEGIFISQRKYAENILKKFKMDNCKSVTTPLLPNEKQKARDGADKVDPTIYRSLVGSL 973 Query: 3 V 1 + Sbjct: 974 L 974 >emb|CAN63536.1| hypothetical protein VITISV_002860 [Vitis vinifera] Length = 1041 Score = 116 bits (290), Expect = 2e-24 Identities = 54/121 (44%), Positives = 84/121 (69%) Frame = -3 Query: 363 TLYTKKNS*GEILIASIYVDDLIFIGDGVRMFQGFKRCMMQTFEMTNLGLPHFFLRIEVE 184 TL+ K G++ I +YVDDLI+ G+ MF+ FK+ MM FEM++LG+ H+FL IE+ Sbjct: 779 TLFIKIEDGGKMHIVCLYVDDLIYTGNNTAMFESFKKSMMAEFEMSDLGMMHYFLGIEMM 838 Query: 183 QKEDGIVVSQKKYTKELLERFRMENATPISTPMDVGLKLSISDGKLMVNPKLYQSLVGGL 4 Q GI++SQKKY E+L+RF+M++ P++TP + G+KL+ +G V+ LY+ +VG L Sbjct: 839 QYSTGILISQKKYVGEILDRFQMKDCNPVNTPSEFGMKLNKDNGGKKVDDTLYKQIVGSL 898 Query: 3 V 1 + Sbjct: 899 M 899