BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00044360
         (395 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN68552.1| hypothetical protein VITISV_014227 [Vitis vinifera]   176   2e-42
emb|CBI30318.3| unnamed protein product [Vitis vinifera]              174   7e-42
ref|XP_002276333.1| PREDICTED: pentatricopeptide repeat-containi...   174   7e-42
ref|XP_003518209.1| PREDICTED: pentatricopeptide repeat-containi...   172   3e-41
ref|XP_002323422.1| predicted protein [Populus trichocarpa] gi|2...   170   1e-40

>emb|CAN68552.1| hypothetical protein VITISV_014227 [Vitis vinifera]
          Length = 1309

 Score =  176 bits (445), Expect = 2e-42
 Identities = 83/98 (84%), Positives = 87/98 (88%)
 Frame = +2

Query: 5    KLEIVGYVPDTSFVLHDVDEELKEEILYTHSEKLAIAFGHICTPEGTPIRITKNLRVCGD 184
            KLE+VGYVPDT+FVLHDVDEELK  ILYTHSEKLAIAFG I TPE TPIRI KNLRVCGD
Sbjct: 1212 KLELVGYVPDTNFVLHDVDEELKIGILYTHSEKLAIAFGLIATPEHTPIRIIKNLRVCGD 1271

Query: 185  CHTFSKLLSTILQREIVVRDANRFHHFKEGACSCGDYW 298
            CHTF KL+S I  R I+VRDANRFHHFKEGACSCGDYW
Sbjct: 1272 CHTFCKLVSAITGRVIIVRDANRFHHFKEGACSCGDYW 1309



 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 48/56 (85%), Positives = 50/56 (89%)
 Frame = +2

Query: 5   KLEIVGYVPDTSFVLHDVDEELKEEILYTHSEKLAIAFGHICTPEGTPIRITKNLR 172
           KLE+VGYVPDT+FVLHDVDEELK  ILYTHSEKLAIAFG I TPE TPIRI KNLR
Sbjct: 536 KLELVGYVPDTNFVLHDVDEELKIGILYTHSEKLAIAFGLIATPEHTPIRIIKNLR 591


>emb|CBI30318.3| unnamed protein product [Vitis vinifera]
          Length = 861

 Score =  174 bits (441), Expect = 7e-42
 Identities = 82/98 (83%), Positives = 87/98 (88%)
 Frame = +2

Query: 5    KLEIVGYVPDTSFVLHDVDEELKEEILYTHSEKLAIAFGHICTPEGTPIRITKNLRVCGD 184
            KLE+VGYVPDT+FVLHDVDEELK  ILY+HSEKLAIAFG I TPE TPIRI KNLRVCGD
Sbjct: 764  KLELVGYVPDTNFVLHDVDEELKIGILYSHSEKLAIAFGLIATPEHTPIRIIKNLRVCGD 823

Query: 185  CHTFSKLLSTILQREIVVRDANRFHHFKEGACSCGDYW 298
            CHTF KL+S I  R I+VRDANRFHHFKEGACSCGDYW
Sbjct: 824  CHTFCKLVSAITGRVIIVRDANRFHHFKEGACSCGDYW 861


>ref|XP_002276333.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Vitis vinifera]
          Length = 705

 Score =  174 bits (441), Expect = 7e-42
 Identities = 82/98 (83%), Positives = 87/98 (88%)
 Frame = +2

Query: 5   KLEIVGYVPDTSFVLHDVDEELKEEILYTHSEKLAIAFGHICTPEGTPIRITKNLRVCGD 184
           KLE+VGYVPDT+FVLHDVDEELK  ILY+HSEKLAIAFG I TPE TPIRI KNLRVCGD
Sbjct: 608 KLELVGYVPDTNFVLHDVDEELKIGILYSHSEKLAIAFGLIATPEHTPIRIIKNLRVCGD 667

Query: 185 CHTFSKLLSTILQREIVVRDANRFHHFKEGACSCGDYW 298
           CHTF KL+S I  R I+VRDANRFHHFKEGACSCGDYW
Sbjct: 668 CHTFCKLVSAITGRVIIVRDANRFHHFKEGACSCGDYW 705


>ref|XP_003518209.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Glycine max]
          Length = 573

 Score =  172 bits (436), Expect = 3e-41
 Identities = 76/99 (76%), Positives = 89/99 (89%)
 Frame = +2

Query: 2   KKLEIVGYVPDTSFVLHDVDEELKEEILYTHSEKLAIAFGHICTPEGTPIRITKNLRVCG 181
           KKLE+ GYVPDT FVL DV+EE+K+E+LYTHSEKLAIAFG I  PEG PIRI+KNLRVCG
Sbjct: 475 KKLEMAGYVPDTDFVLQDVEEEVKQEMLYTHSEKLAIAFGLIAIPEGEPIRISKNLRVCG 534

Query: 182 DCHTFSKLLSTILQREIVVRDANRFHHFKEGACSCGDYW 298
           DCHTFSK++S+I++R I+VRDANRFHHF +G CSCGDYW
Sbjct: 535 DCHTFSKMVSSIMRRSIIVRDANRFHHFNDGTCSCGDYW 573


>ref|XP_002323422.1| predicted protein [Populus trichocarpa] gi|222868052|gb|EEF05183.1|
           predicted protein [Populus trichocarpa]
          Length = 574

 Score =  170 bits (430), Expect = 1e-40
 Identities = 78/99 (78%), Positives = 87/99 (87%)
 Frame = +2

Query: 2   KKLEIVGYVPDTSFVLHDVDEELKEEILYTHSEKLAIAFGHICTPEGTPIRITKNLRVCG 181
           +KLE  GYVPDT+ VLHDVDEE+K  IL+ HSEKLAIAFG I TP+GTPIRITKNLRVCG
Sbjct: 476 QKLESAGYVPDTNSVLHDVDEEVKLGILHAHSEKLAIAFGLIATPDGTPIRITKNLRVCG 535

Query: 182 DCHTFSKLLSTILQREIVVRDANRFHHFKEGACSCGDYW 298
           DCH+F KL+S I QR+I+VRDANRFHHFKEG CSCGDYW
Sbjct: 536 DCHSFCKLVSAITQRDIIVRDANRFHHFKEGICSCGDYW 574