BLASTX nr result

ID: Coptis25_contig00044354 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00044354
         (335 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512822.1| ATP binding protein, putative [Ricinus commu...    80   2e-13
ref|XP_002276030.1| PREDICTED: LRR receptor-like serine/threonin...    71   8e-11
ref|XP_003548492.1| PREDICTED: LRR receptor-like serine/threonin...    65   4e-09
ref|XP_002321080.1| predicted protein [Populus trichocarpa] gi|2...    65   4e-09
ref|XP_003624516.1| Receptor-like-kinase [Medicago truncatula] g...    61   8e-08

>ref|XP_002512822.1| ATP binding protein, putative [Ricinus communis]
           gi|223547833|gb|EEF49325.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 1050

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 51/117 (43%), Positives = 67/117 (57%), Gaps = 6/117 (5%)
 Frame = -2

Query: 334 MVYFNVSRNSLSGHLPRFPXXXXXXXXXXXXSQDGNLVEKQYIGGVF----LRGSWINEQ 167
           MVYFNVS+N++S  LP F              QD + ++ + +   F    + G  +   
Sbjct: 382 MVYFNVSQNNMSRALPSFQKGSCDASMILFG-QDHSFLDMEDVRIAFSSIPVWGPQMVTS 440

Query: 166 LPSDGE--FVVVHDFSWNILSGALPLFSFGDGFASMLDKKPSYKLLLNDNRLNGSLP 2
           L S GE  FV+VHDFSWN   G+LPLFS GD F +    KP+Y+LLLN+N  NGSLP
Sbjct: 441 LGSMGEEDFVIVHDFSWNQFVGSLPLFSVGDEFLA-TKNKPTYRLLLNENMFNGSLP 496


>ref|XP_002276030.1| PREDICTED: LRR receptor-like serine/threonine-protein kinase RPK2
           [Vitis vinifera] gi|147802220|emb|CAN68268.1|
           hypothetical protein VITISV_029909 [Vitis vinifera]
          Length = 1066

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 49/124 (39%), Positives = 62/124 (50%), Gaps = 13/124 (10%)
 Frame = -2

Query: 334 MVYFNVSRNSLSGHLPRFPXXXXXXXXXXXXSQ----DGNLVEKQY---------IGGVF 194
           MVYFN+SRN L+G LPRF                   D   ++  Y         +  +F
Sbjct: 393 MVYFNISRNMLTGVLPRFGKESCHSIMVSYGQAPIFLDVEDIQNAYSNIPVWGYQMSTIF 452

Query: 193 LRGSWINEQLPSDGEFVVVHDFSWNILSGALPLFSFGDGFASMLDKKPSYKLLLNDNRLN 14
             GS ++E L      V +HDFSWN   G +P FS G  F +  + KPSYKL LN+N LN
Sbjct: 453 --GSLVDENL------VFIHDFSWNRFIGPIPSFSIGGDFLAT-NHKPSYKLFLNNNALN 503

Query: 13  GSLP 2
           GSLP
Sbjct: 504 GSLP 507


>ref|XP_003548492.1| PREDICTED: LRR receptor-like serine/threonine-protein kinase
           RPK2-like, partial [Glycine max]
          Length = 1022

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 42/111 (37%), Positives = 56/111 (50%), Gaps = 1/111 (0%)
 Frame = -2

Query: 334 MVYFNVSRNSLSGHLPRFPXXXXXXXXXXXXSQDGNLVEKQYIG-GVFLRGSWINEQLPS 158
           M+YFN+SRN++SG L  F               D + +E        F + + I      
Sbjct: 358 MMYFNISRNNISGTLQGFRNESCGASAL-----DASFLELNGFNVWRFQKNALIGSGFEE 412

Query: 157 DGEFVVVHDFSWNILSGALPLFSFGDGFASMLDKKPSYKLLLNDNRLNGSL 5
               VV HDFSWN  SG+LPLFS GD   S  ++  SY L LN+N+ NG+L
Sbjct: 413 TNTVVVSHDFSWNSFSGSLPLFSLGDNL-SGANRNVSYTLSLNNNKFNGTL 462


>ref|XP_002321080.1| predicted protein [Populus trichocarpa] gi|222861853|gb|EEE99395.1|
           predicted protein [Populus trichocarpa]
          Length = 1065

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 43/115 (37%), Positives = 60/115 (52%), Gaps = 4/115 (3%)
 Frame = -2

Query: 334 MVYFNVSRNSLSGHLPRFPXXXXXXXXXXXXSQDGNLVEKQYI----GGVFLRGSWINEQ 167
           M+YFNVS+N++SG +P F              QD N    + I      + + GS     
Sbjct: 395 MMYFNVSQNNISGAVPTF-GKGSCDTSIISYGQDPNFFYVEDIQIAYANIPVWGSHTLLG 453

Query: 166 LPSDGEFVVVHDFSWNILSGALPLFSFGDGFASMLDKKPSYKLLLNDNRLNGSLP 2
             +  +FV+VHDFSWN   G+LP FS G+ F  +   + SY+LLL+ N   GSLP
Sbjct: 454 SMAGADFVIVHDFSWNHFVGSLPSFSVGEEFL-VSKNRTSYRLLLSSNGFTGSLP 507


>ref|XP_003624516.1| Receptor-like-kinase [Medicago truncatula]
           gi|355499531|gb|AES80734.1| Receptor-like-kinase
           [Medicago truncatula]
          Length = 1131

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 43/117 (36%), Positives = 55/117 (47%), Gaps = 6/117 (5%)
 Frame = -2

Query: 334 MVYFNVSRNSLSGHLPRFPXXXXXXXXXXXXSQDGNLVEKQYIGGVFLRGSWINEQLPSD 155
           M YFNVSRN++SG LP F              +   L  +      F   SW +++    
Sbjct: 454 MTYFNVSRNNISGTLPGFMKERCRSSSTLAALEPAFLELEGLNDAYFNIRSWRSQENAFI 513

Query: 154 GE-----FVVVHDFSWNILSGALPLFSFGDG-FASMLDKKPSYKLLLNDNRLNGSLP 2
           G       VV HDFS N   G LPLF  GD  F    ++  SY L LN+N+ NG+LP
Sbjct: 514 GSGFEETVVVSHDFSSNSFVGPLPLFFVGDNLFTENENRNISYMLSLNNNKFNGTLP 570


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