BLASTX nr result

ID: Coptis25_contig00044342 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00044342
         (362 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265151.2| PREDICTED: probable inactive leucine-rich re...   208   4e-52
ref|XP_002514942.1| protein with unknown function [Ricinus commu...   205   4e-51
ref|XP_002315618.1| predicted protein [Populus trichocarpa] gi|2...   201   5e-50
ref|XP_002312630.1| predicted protein [Populus trichocarpa] gi|2...   197   7e-49
emb|CBI27592.3| unnamed protein product [Vitis vinifera]              196   2e-48

>ref|XP_002265151.2| PREDICTED: probable inactive leucine-rich repeat receptor-like
           protein kinase At1g66830-like [Vitis vinifera]
          Length = 709

 Score =  208 bits (529), Expect = 4e-52
 Identities = 95/120 (79%), Positives = 112/120 (93%)
 Frame = +2

Query: 2   GLSLLALKSAVDTSPEASAAFSNWNEDDPNPCTWSGVSCMNLTGFTDPRVVGVAVSGKNL 181
           GLSLL+LKSAVD   +A++AFS+WNEDDPNPC W+G+SCMN++GF+DPRVVG+A+SG+NL
Sbjct: 27  GLSLLSLKSAVD---DAASAFSDWNEDDPNPCRWTGISCMNVSGFSDPRVVGIAISGRNL 83

Query: 182 RGYIPSELGTLIFLRRLNLHGNNFYGSIPVQLFNASSLHSIFLYNNNLSGSLPPSICHLP 361
           RGYIPSELG L +LRRLNLHGNNFYGSIPVQLFNASSLHSIFLY NNLSG+LPP++C LP
Sbjct: 84  RGYIPSELGNLFYLRRLNLHGNNFYGSIPVQLFNASSLHSIFLYGNNLSGTLPPAMCQLP 143


>ref|XP_002514942.1| protein with unknown function [Ricinus communis]
           gi|223545993|gb|EEF47496.1| protein with unknown
           function [Ricinus communis]
          Length = 810

 Score =  205 bits (521), Expect = 4e-51
 Identities = 94/120 (78%), Positives = 107/120 (89%)
 Frame = +2

Query: 2   GLSLLALKSAVDTSPEASAAFSNWNEDDPNPCTWSGVSCMNLTGFTDPRVVGVAVSGKNL 181
           GLSLL+LKSAVD  P+    FS+WNEDDP PC W+G+SCMN+TGF DPRVVG+A+SGKNL
Sbjct: 34  GLSLLSLKSAVD-QPDGDNPFSDWNEDDPTPCKWTGISCMNVTGFPDPRVVGIAISGKNL 92

Query: 182 RGYIPSELGTLIFLRRLNLHGNNFYGSIPVQLFNASSLHSIFLYNNNLSGSLPPSICHLP 361
           RGYIPSELGTL++LRRLNLH NNFYGSIP  LFNA+SLHS+FLY NNLSGSLPPSIC+LP
Sbjct: 93  RGYIPSELGTLLYLRRLNLHSNNFYGSIPADLFNATSLHSLFLYGNNLSGSLPPSICNLP 152


>ref|XP_002315618.1| predicted protein [Populus trichocarpa] gi|222864658|gb|EEF01789.1|
           predicted protein [Populus trichocarpa]
          Length = 532

 Score =  201 bits (511), Expect = 5e-50
 Identities = 95/120 (79%), Positives = 107/120 (89%)
 Frame = +2

Query: 2   GLSLLALKSAVDTSPEASAAFSNWNEDDPNPCTWSGVSCMNLTGFTDPRVVGVAVSGKNL 181
           GLSLL+LKSAVD S  A +AFS+WNEDD NPC W+G+SCMN+TG  DPRVVG+A+SGKNL
Sbjct: 45  GLSLLSLKSAVDQS-SAGSAFSDWNEDDQNPCHWTGISCMNITGLPDPRVVGIAISGKNL 103

Query: 182 RGYIPSELGTLIFLRRLNLHGNNFYGSIPVQLFNASSLHSIFLYNNNLSGSLPPSICHLP 361
           RGYIPSELGTLI+LRRLNLH NNFYGSIP QL NA+SLHS+FLY NNLSGSLPP IC+LP
Sbjct: 104 RGYIPSELGTLIYLRRLNLHNNNFYGSIPDQLLNATSLHSLFLYGNNLSGSLPPFICNLP 163


>ref|XP_002312630.1| predicted protein [Populus trichocarpa] gi|222852450|gb|EEE89997.1|
           predicted protein [Populus trichocarpa]
          Length = 587

 Score =  197 bits (501), Expect = 7e-49
 Identities = 91/120 (75%), Positives = 105/120 (87%)
 Frame = +2

Query: 2   GLSLLALKSAVDTSPEASAAFSNWNEDDPNPCTWSGVSCMNLTGFTDPRVVGVAVSGKNL 181
           GLSLL+LKSAVD +  A +AFS+WNEDDP PC W+G+SCMN+TG  DP VVG+A+SGKNL
Sbjct: 30  GLSLLSLKSAVDQT-SAGSAFSDWNEDDPTPCLWTGISCMNITGLPDPHVVGIAISGKNL 88

Query: 182 RGYIPSELGTLIFLRRLNLHGNNFYGSIPVQLFNASSLHSIFLYNNNLSGSLPPSICHLP 361
           RGYIPSELG LI+LRRLNLH NNFYG IP QLFNA++LH +FLY NNLSGSLPPSIC+LP
Sbjct: 89  RGYIPSELGNLIYLRRLNLHNNNFYGPIPDQLFNATALHGLFLYGNNLSGSLPPSICNLP 148


>emb|CBI27592.3| unnamed protein product [Vitis vinifera]
          Length = 674

 Score =  196 bits (497), Expect = 2e-48
 Identities = 88/112 (78%), Positives = 104/112 (92%)
 Frame = +2

Query: 26  SAVDTSPEASAAFSNWNEDDPNPCTWSGVSCMNLTGFTDPRVVGVAVSGKNLRGYIPSEL 205
           SAVD   +A++AFS+WNEDDPNPC W+G+SCMN++GF+DPRVVG+A+SG+NLRGYIPSEL
Sbjct: 19  SAVD---DAASAFSDWNEDDPNPCRWTGISCMNVSGFSDPRVVGIAISGRNLRGYIPSEL 75

Query: 206 GTLIFLRRLNLHGNNFYGSIPVQLFNASSLHSIFLYNNNLSGSLPPSICHLP 361
           G L +LRRLNLHGNNFYGSIPVQLFNASSLHSIFLY NNLSG+LPP++C LP
Sbjct: 76  GNLFYLRRLNLHGNNFYGSIPVQLFNASSLHSIFLYGNNLSGTLPPAMCQLP 127


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