BLASTX nr result
ID: Coptis25_contig00044327
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00044327
(298 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002528881.1| conserved hypothetical protein [Ricinus comm... 110 2e-22
ref|XP_002525781.1| S-locus-specific glycoprotein S13 precursor,... 109 3e-22
ref|XP_002316947.1| predicted protein [Populus trichocarpa] gi|2... 109 3e-22
ref|XP_002280679.2| PREDICTED: uncharacterized protein LOC100260... 108 5e-22
emb|CAN70177.1| hypothetical protein VITISV_000002 [Vitis vinifera] 108 5e-22
>ref|XP_002528881.1| conserved hypothetical protein [Ricinus communis]
gi|223531680|gb|EEF33505.1| conserved hypothetical
protein [Ricinus communis]
Length = 2428
Score = 110 bits (274), Expect = 2e-22
Identities = 51/100 (51%), Positives = 70/100 (70%), Gaps = 2/100 (2%)
Frame = -3
Query: 296 FELGFVG--NESRYLGVWYKNISSHKIVWVENKDRPLTDSSGVLRIDSHGNLVLVDRNGS 123
FELGF N + YLG+W+K IS I WV N++ PLT+SSGVL+ D G LVL++++
Sbjct: 1678 FELGFFSLRNSNYYLGIWFKKISHGTIAWVANRETPLTNSSGVLKFDDRGKLVLLNQDNL 1737
Query: 122 RLWPSNISSIAPDSVAELLDSGNLILSNNNSANPDSYLWQ 3
LW SNIS + + VA+LLDSGNL++ + N P++YLWQ
Sbjct: 1738 ILWSSNISRVVQNPVAQLLDSGNLVIRDENDTVPENYLWQ 1777
Score = 101 bits (251), Expect = 7e-20
Identities = 48/101 (47%), Positives = 66/101 (65%), Gaps = 3/101 (2%)
Frame = -3
Query: 296 FELGFVG---NESRYLGVWYKNISSHKIVWVENKDRPLTDSSGVLRIDSHGNLVLVDRNG 126
F+LGF ++ RYLG+WY I +VWV N++ P+TD S VL+I+ GNL++V +N
Sbjct: 44 FKLGFFSPGTSKDRYLGIWYNKIPIVTVVWVANRENPVTDLSSVLKINDQGNLIIVTKND 103
Query: 125 SRLWPSNISSIAPDSVAELLDSGNLILSNNNSANPDSYLWQ 3
S +W SN S A D VA+LLDSGN I+ + N + YLWQ
Sbjct: 104 SIIWSSNSKSFARDPVAQLLDSGNFIVKDLGYNNSEVYLWQ 144
Score = 84.3 bits (207), Expect = 9e-15
Identities = 40/87 (45%), Positives = 60/87 (68%), Gaps = 3/87 (3%)
Frame = -3
Query: 296 FELGF--VGN-ESRYLGVWYKNISSHKIVWVENKDRPLTDSSGVLRIDSHGNLVLVDRNG 126
FELGF GN +RYLG+WYK IS+ +VWV N++ PL +SSGVL ++ G L L++
Sbjct: 887 FELGFFSTGNPNNRYLGIWYKKISNGTVVWVANRETPLNNSSGVLELNDKGLLTLLNHEN 946
Query: 125 SRLWPSNISSIAPDSVAELLDSGNLIL 45
+W S+ S + + +A+LL+SGNL++
Sbjct: 947 LTIWSSSTSRVVQNPLAQLLESGNLVV 973
>ref|XP_002525781.1| S-locus-specific glycoprotein S13 precursor, putative [Ricinus
communis] gi|223534931|gb|EEF36617.1| S-locus-specific
glycoprotein S13 precursor, putative [Ricinus communis]
Length = 868
Score = 109 bits (272), Expect = 3e-22
Identities = 49/101 (48%), Positives = 71/101 (70%), Gaps = 3/101 (2%)
Frame = -3
Query: 296 FELGFVG---NESRYLGVWYKNISSHKIVWVENKDRPLTDSSGVLRIDSHGNLVLVDRNG 126
F+LGF + +RYLG+WY +S +VWV N++ PL DSSGVL+I H L L++ NG
Sbjct: 89 FKLGFFSPGNSRTRYLGIWYNKVSVMTVVWVANRETPLIDSSGVLKITDHRILALLNHNG 148
Query: 125 SRLWPSNISSIAPDSVAELLDSGNLILSNNNSANPDSYLWQ 3
S++W SN++ A + VA+LLDSGNLI+ + NP+++LWQ
Sbjct: 149 SKIWSSNVTMAARNPVAQLLDSGNLIVKDEGDDNPENFLWQ 189
>ref|XP_002316947.1| predicted protein [Populus trichocarpa] gi|222860012|gb|EEE97559.1|
predicted protein [Populus trichocarpa]
Length = 768
Score = 109 bits (272), Expect = 3e-22
Identities = 52/101 (51%), Positives = 70/101 (69%), Gaps = 3/101 (2%)
Frame = -3
Query: 296 FELGFV--GNESR-YLGVWYKNISSHKIVWVENKDRPLTDSSGVLRIDSHGNLVLVDRNG 126
FELGF GN +R YLG+WY IS K+VWV N++ P+TD SGVL+ D G L+L +NG
Sbjct: 43 FELGFFSPGNSTRRYLGIWYNKISKGKVVWVANREIPITDKSGVLKFDERGALILAIQNG 102
Query: 125 SRLWPSNISSIAPDSVAELLDSGNLILSNNNSANPDSYLWQ 3
S +W SN S A + VA+LLDSGNL++ N N ++++WQ
Sbjct: 103 SVIWSSNTSRHAQNPVAQLLDSGNLVVRNENDRRTENFVWQ 143
>ref|XP_002280679.2| PREDICTED: uncharacterized protein LOC100260657 [Vitis vinifera]
Length = 1593
Score = 108 bits (270), Expect = 5e-22
Identities = 50/101 (49%), Positives = 71/101 (70%), Gaps = 3/101 (2%)
Frame = -3
Query: 296 FELGFVG---NESRYLGVWYKNISSHKIVWVENKDRPLTDSSGVLRIDSHGNLVLVDRNG 126
FELGF +++RYLG+WYK ++ +VWV N++ PLTDSSGVL++ G LVLV+
Sbjct: 842 FELGFFSPGNSKNRYLGIWYKKVAPRTVVWVANRESPLTDSSGVLKVTQQGILVLVNDTN 901
Query: 125 SRLWPSNISSIAPDSVAELLDSGNLILSNNNSANPDSYLWQ 3
LW SN S A D A+LL+SGNL++ N N ++P+++LWQ
Sbjct: 902 GILWNSNSSHSALDPNAQLLESGNLVMRNGNDSDPENFLWQ 942
Score = 103 bits (257), Expect = 1e-20
Identities = 47/101 (46%), Positives = 70/101 (69%), Gaps = 3/101 (2%)
Frame = -3
Query: 296 FELGFVG---NESRYLGVWYKNISSHKIVWVENKDRPLTDSSGVLRIDSHGNLVLVDRNG 126
FELGF +++RYLG+WYK +++ +VWV N++ PLTDSSGVL++ G LVLV+
Sbjct: 46 FELGFFSPGNSKNRYLGIWYKKVATGTVVWVANRESPLTDSSGVLKVTEQGILVLVNGTN 105
Query: 125 SRLWPSNISSIAPDSVAELLDSGNLILSNNNSANPDSYLWQ 3
LW SN S A D A+LL+SGNL++ + N ++ +++ WQ
Sbjct: 106 GILWNSNSSRFAEDPNAQLLESGNLVMRSGNDSDSENFFWQ 146
>emb|CAN70177.1| hypothetical protein VITISV_000002 [Vitis vinifera]
Length = 1115
Score = 108 bits (270), Expect = 5e-22
Identities = 49/101 (48%), Positives = 74/101 (73%), Gaps = 3/101 (2%)
Frame = -3
Query: 296 FELGF--VGNE-SRYLGVWYKNISSHKIVWVENKDRPLTDSSGVLRIDSHGNLVLVDRNG 126
FELGF +GN +RYLG+WYK +++ +VWV N+D PLTDSSGVL++ G LV+++
Sbjct: 820 FELGFFSLGNSRNRYLGIWYKKLATGTVVWVANRDIPLTDSSGVLKVTVQGTLVILNGTN 879
Query: 125 SRLWPSNISSIAPDSVAELLDSGNLILSNNNSANPDSYLWQ 3
+ +W S+ S A + A+LLDSGNL++ N N ++P+++LWQ
Sbjct: 880 TIIWSSDASQSAQNPTAQLLDSGNLVMKNGNDSDPENFLWQ 920
Score = 104 bits (260), Expect = 7e-21
Identities = 47/101 (46%), Positives = 69/101 (68%), Gaps = 3/101 (2%)
Frame = -3
Query: 296 FELGFV---GNESRYLGVWYKNISSHKIVWVENKDRPLTDSSGVLRIDSHGNLVLVDRNG 126
FELGF ++++YLG+WYK ++ +VWV N D PLTDS GVL++ G LV+++
Sbjct: 46 FELGFYTPENSKNQYLGIWYKKVTPRTVVWVANGDFPLTDSLGVLKVTDQGTLVILNGTN 105
Query: 125 SRLWPSNISSIAPDSVAELLDSGNLILSNNNSANPDSYLWQ 3
S +W SN S A + A+LL+SGNL+L N N +P+++LWQ
Sbjct: 106 SIIWSSNASRSAQNPTAQLLESGNLVLKNGNDDDPENFLWQ 146