BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00044297
         (631 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAC95175.1| putative non-LTR retroelement reverse transcripta...    82   6e-14
emb|CAN64339.1| hypothetical protein VITISV_031562 [Vitis vinifera]    82   8e-14
ref|XP_002450843.1| hypothetical protein SORBIDRAFT_05g019526 [S...    79   5e-13
emb|CAN83561.1| hypothetical protein VITISV_024106 [Vitis vinifera]    79   7e-13
emb|CAN75028.1| hypothetical protein VITISV_026823 [Vitis vinifera]    79   7e-13

>gb|AAC95175.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1352

 Score = 82.4 bits (202), Expect = 6e-14
 Identities = 58/176 (32%), Positives = 85/176 (48%), Gaps = 13/176 (7%)
 Frame = +2

Query: 101 SIIHNDSQSRLGNLWIFCKIGIDMRVVLVTEQHISVLV------NDCVLSFVHASCSLIL 262
           S + N    RLG +W+  K  + +  V  + Q I+  V       D  +SF++AS  +  
Sbjct: 293 SSMTNYEHHRLGRIWVVWKNTVRVTPVYKSGQLITCSVLTEENAEDFFVSFIYASNYVDE 352

Query: 263 RRELWQDLKL-----INTTSPWVVIGDFNVVLRNEEKKG-IRAPS-RVAMRDFNNFVNEI 421
           RRELW+DL+      +     W+++GDFN +L  E+    + +P     MRDF + V   
Sbjct: 353 RRELWEDLRNHYDLPMFRNKGWMILGDFNEILDGEDHSNFVNSPFIPQGMRDFQDVVRYC 412

Query: 422 ELLESTWEGMKFTWCNNQLGYRRVTSRLDRVFYNEAWNLKFAGWKYKAEARYASDH 589
            L + ++ G  FTWCN +     V  +LDRV  NE W  KF       EA   SDH
Sbjct: 413 SLADMSYHGPVFTWCNKR-EEGLVNKKLDRVLVNEVWTRKFPAVYSIFEAGGISDH 467


>emb|CAN64339.1| hypothetical protein VITISV_031562 [Vitis vinifera]
          Length = 1739

 Score = 82.0 bits (201), Expect = 8e-14
 Identities = 52/128 (40%), Positives = 70/128 (54%), Gaps = 2/128 (1%)
 Frame = +2

Query: 224  VLSFVHASCSLILRRELWQDL-KLINTTSP-WVVIGDFNVVLRNEEKKGIRAPSRVAMRD 397
            V+S V+   SL LR++ W +L  +   T P W V GDFNV+ R+ EK G  + +  +MRD
Sbjct: 677  VISAVYGPNSLSLRKDFWVELFDIYGLTYPLWCVGGDFNVIRRSSEKLGGSSLTS-SMRD 735

Query: 398  FNNFVNEIELLESTWEGMKFTWCNNQLGYRRVTSRLDRVFYNEAWNLKFAGWKYKAEARY 577
            F++F+ E ELL+       FTW N  L    V  RLDR  Y+  W L F     +A  R 
Sbjct: 736  FDSFIRECELLDPLLRNASFTWSN--LQESPVCKRLDRFLYSNEWGLLFPQGLQEALIRR 793

Query: 578  ASDHSPII 601
             SDH PI+
Sbjct: 794  TSDHWPIV 801


>ref|XP_002450843.1| hypothetical protein SORBIDRAFT_05g019526 [Sorghum bicolor]
           gi|241936686|gb|EES09831.1| hypothetical protein
           SORBIDRAFT_05g019526 [Sorghum bicolor]
          Length = 1209

 Score = 79.3 bits (194), Expect = 5e-13
 Identities = 51/172 (29%), Positives = 82/172 (47%), Gaps = 7/172 (4%)
 Frame = +2

Query: 107 IHNDSQSRLGNLWIFCKIGIDMRVVLVTEQHISVLVNDCV-----LSFVHASCSLILRRE 271
           + + S  R G L IF    I ++++  ++ HI V++++       L+ V+    ++ R +
Sbjct: 321 LEDSSTGRSGGLGIFWNNKISVQLLPYSKYHIDVIISEGSADPWRLTCVYGEAQIVERYK 380

Query: 272 LWQDLKLI--NTTSPWVVIGDFNVVLRNEEKKGIRAPSRVAMRDFNNFVNEIELLESTWE 445
            W  LK I  N++ PWV IGDFN VL   E  G++  S   +  F   V+   L +  +E
Sbjct: 381 TWDMLKSIKPNSSLPWVCIGDFNEVLHRSEHLGVQERSYAQIAGFREMVDVCGLCDLGYE 440

Query: 446 GMKFTWCNNQLGYRRVTSRLDRVFYNEAWNLKFAGWKYKAEARYASDHSPII 601
           G  +T+     G      RLDR      W+ +F   K +     ASDH PI+
Sbjct: 441 GRSWTYEKKVTGGSFCRVRLDRALATPEWSARFPLAKVRHITAAASDHGPIV 492


>emb|CAN83561.1| hypothetical protein VITISV_024106 [Vitis vinifera]
          Length = 1750

 Score = 79.0 bits (193), Expect = 7e-13
 Identities = 50/127 (39%), Positives = 68/127 (53%), Gaps = 2/127 (1%)
 Frame = +2

Query: 227  LSFVHASCSLILRRELWQDL-KLINTTSP-WVVIGDFNVVLRNEEKKGIRAPSRVAMRDF 400
            +S V+   S  LR++ W +L  +   T P W V GDFNV+ R+ EK G  +    +MRDF
Sbjct: 740  ISAVYGPNSPSLRKDFWVELFDIYGLTYPLWCVGGDFNVIRRSSEKMG-GSSLTPSMRDF 798

Query: 401  NNFVNEIELLESTWEGMKFTWCNNQLGYRRVTSRLDRVFYNEAWNLKFAGWKYKAEARYA 580
            ++F++E ELL+       FTW N Q     V  RLDR  Y+  W L F     +A  R  
Sbjct: 799  DSFISECELLDPPLRNASFTWSNMQ--ESPVCKRLDRFLYSNEWGLLFPQGLQEALIRRT 856

Query: 581  SDHSPII 601
            SDH PI+
Sbjct: 857  SDHWPIV 863


>emb|CAN75028.1| hypothetical protein VITISV_026823 [Vitis vinifera]
          Length = 2182

 Score = 79.0 bits (193), Expect = 7e-13
 Identities = 50/127 (39%), Positives = 68/127 (53%), Gaps = 2/127 (1%)
 Frame = +2

Query: 227  LSFVHASCSLILRRELWQDL-KLINTTSP-WVVIGDFNVVLRNEEKKGIRAPSRVAMRDF 400
            +S V+   S  LR++ W +L  +   T P W V GDFNV+ R+ EK G  +    +MRDF
Sbjct: 731  ISAVYGPNSPSLRKDFWVELFDIYGLTYPLWCVGGDFNVIRRSSEKMG-GSSLTPSMRDF 789

Query: 401  NNFVNEIELLESTWEGMKFTWCNNQLGYRRVTSRLDRVFYNEAWNLKFAGWKYKAEARYA 580
            ++F++E ELL+       FTW N Q     V  RLDR  Y+  W L F     +A  R  
Sbjct: 790  DSFISECELLDPPLRNASFTWSNMQ--ESPVCKRLDRFLYSNXWGLLFPQGLQEALIRRT 847

Query: 581  SDHSPII 601
            SDH PI+
Sbjct: 848  SDHWPIV 854