BLASTX nr result

ID: Coptis25_contig00044288 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00044288
         (303 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004173193.1| PREDICTED: Werner syndrome ATP-dependent hel...   155   2e-36
tpg|DAA64150.1| TPA: hypothetical protein ZEAMMB73_018829 [Zea m...   155   2e-36
ref|XP_003553162.1| PREDICTED: Werner syndrome ATP-dependent hel...   155   2e-36
ref|XP_004149120.1| PREDICTED: ATP-dependent DNA helicase RecQ-l...   155   3e-36
ref|XP_004149119.1| PREDICTED: ATP-dependent DNA helicase RecQ-l...   154   5e-36

>ref|XP_004173193.1| PREDICTED: Werner syndrome ATP-dependent helicase-like, partial
           [Cucumis sativus]
          Length = 173

 Score =  155 bits (393), Expect = 2e-36
 Identities = 72/100 (72%), Positives = 89/100 (89%)
 Frame = -2

Query: 302 SFRPLQKEIIEMVLQGRDALVVMATGSGKSLCYQIPPLVTGKTAVVVSPLLSLMQDQVMS 123
           + RP QKE+I+ +L+G+D LVV  TGSGKSLCYQ+PPLV GKT +VVSPL+SLMQDQVM+
Sbjct: 13  ALRPYQKEVIQSILRGKDCLVVTGTGSGKSLCYQVPPLVVGKTGIVVSPLISLMQDQVMA 72

Query: 122 LKQRGIKAEYLGSTQRDSTVYSNAESGRFDILYITPERAC 3
           LKQRGIK+EYLGSTQ DSTV +NAESG++ IL++TPE+AC
Sbjct: 73  LKQRGIKSEYLGSTQADSTVQANAESGQYSILFMTPEKAC 112


>tpg|DAA64150.1| TPA: hypothetical protein ZEAMMB73_018829 [Zea mays]
          Length = 898

 Score =  155 bits (393), Expect = 2e-36
 Identities = 76/99 (76%), Positives = 89/99 (89%)
 Frame = -2

Query: 302 SFRPLQKEIIEMVLQGRDALVVMATGSGKSLCYQIPPLVTGKTAVVVSPLLSLMQDQVMS 123
           +FRP Q+EII+ VL GRD LVVMATGSGKS+CYQIPPLVT KTAVVVSPLLSLMQDQVMS
Sbjct: 13  TFRPYQREIIQKVLDGRDCLVVMATGSGKSICYQIPPLVTKKTAVVVSPLLSLMQDQVMS 72

Query: 122 LKQRGIKAEYLGSTQRDSTVYSNAESGRFDILYITPERA 6
           LKQ+G+K+EYLGSTQ +S+V + AE G FD+LY+TPE+A
Sbjct: 73  LKQKGVKSEYLGSTQTNSSVSNEAEKGTFDVLYMTPEKA 111


>ref|XP_003553162.1| PREDICTED: Werner syndrome ATP-dependent helicase homolog [Glycine
           max]
          Length = 920

 Score =  155 bits (393), Expect = 2e-36
 Identities = 73/99 (73%), Positives = 88/99 (88%)
 Frame = -2

Query: 299 FRPLQKEIIEMVLQGRDALVVMATGSGKSLCYQIPPLVTGKTAVVVSPLLSLMQDQVMSL 120
           FRP Q+E+IE +++ RD LVVMATGSGKSLCYQ+PPLV  KT +VVSPL+SLMQDQVM+L
Sbjct: 19  FRPYQREVIEKIIEKRDCLVVMATGSGKSLCYQVPPLVAKKTGIVVSPLISLMQDQVMAL 78

Query: 119 KQRGIKAEYLGSTQRDSTVYSNAESGRFDILYITPERAC 3
           KQRGIKAEYLGS Q+D TV+S AE G+FDIL++TPE+AC
Sbjct: 79  KQRGIKAEYLGSAQKDFTVHSKAEHGQFDILFMTPEKAC 117


>ref|XP_004149120.1| PREDICTED: ATP-dependent DNA helicase RecQ-like [Cucumis sativus]
          Length = 822

 Score =  155 bits (392), Expect = 3e-36
 Identities = 72/100 (72%), Positives = 89/100 (89%)
 Frame = -2

Query: 302 SFRPLQKEIIEMVLQGRDALVVMATGSGKSLCYQIPPLVTGKTAVVVSPLLSLMQDQVMS 123
           + RP QKE+I+ +L+G+D LVV  TGSGKSLCYQ+PPLV GKT +VVSPL+SLMQDQVM+
Sbjct: 13  ALRPYQKEVIQSILRGKDCLVVTGTGSGKSLCYQVPPLVVGKTGIVVSPLVSLMQDQVMA 72

Query: 122 LKQRGIKAEYLGSTQRDSTVYSNAESGRFDILYITPERAC 3
           LKQRGIK+EYLGSTQ DSTV +NAESG++ IL++TPE+AC
Sbjct: 73  LKQRGIKSEYLGSTQADSTVQANAESGQYSILFMTPEKAC 112


>ref|XP_004149119.1| PREDICTED: ATP-dependent DNA helicase RecQ-like [Cucumis sativus]
          Length = 906

 Score =  154 bits (390), Expect = 5e-36
 Identities = 74/100 (74%), Positives = 89/100 (89%)
 Frame = -2

Query: 302 SFRPLQKEIIEMVLQGRDALVVMATGSGKSLCYQIPPLVTGKTAVVVSPLLSLMQDQVMS 123
           +FR  QKEII  +L G+D LVVM+TGSGKSLCYQ+PPLV GKT +VVSPL+SLMQDQVM+
Sbjct: 13  AFRLYQKEIIRDILLGKDCLVVMSTGSGKSLCYQVPPLVVGKTGIVVSPLISLMQDQVMA 72

Query: 122 LKQRGIKAEYLGSTQRDSTVYSNAESGRFDILYITPERAC 3
           LKQRGIK+EYLGSTQ DSTV +NAESG++ IL++TPE+AC
Sbjct: 73  LKQRGIKSEYLGSTQADSTVQANAESGQYSILFMTPEKAC 112


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