BLASTX nr result

ID: Coptis25_contig00044283 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00044283
         (497 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003613983.1| hypothetical protein MTR_5g043380 [Medicago ...    56   3e-06

>ref|XP_003613983.1| hypothetical protein MTR_5g043380 [Medicago truncatula]
           gi|355515318|gb|AES96941.1| hypothetical protein
           MTR_5g043380 [Medicago truncatula]
          Length = 593

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 37/108 (34%), Positives = 56/108 (51%), Gaps = 5/108 (4%)
 Frame = +2

Query: 188 SKSYAAVLKPKYGRN-IDISLLSIPGRQCEFPTISLIEEEVDKGIEFCSQSLVGRLDMNK 364
           +KS+ A L    G+N ID   L  P  + E  +I + ++E   G+E C  +L GRL +NK
Sbjct: 34  TKSFLAALA---GQNVIDDRPLPTPCIKGEALSIKIFQDEYHIGVEECKNALRGRLTLNK 90

Query: 365 VDLDR----IRTLVRLHWKPVGFV*VTPLGRGHIMFRFNKVEDFQKIW 496
            D       + T +  HWK      + PLG+G+  F F+  +D +KIW
Sbjct: 91  GDKPYSARDLSTKIGKHWKTSAAWKMAPLGKGYYDFHFDSADDLRKIW 138


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