BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00044254
         (527 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26162.3| unnamed protein product [Vitis vinifera]              174   9e-42
gb|ABD96889.1| hypothetical protein [Cleome spinosa]                  173   2e-41
ref|XP_004155892.1| PREDICTED: pentatricopeptide repeat-containi...   172   3e-41
ref|XP_004134313.1| PREDICTED: pentatricopeptide repeat-containi...   172   3e-41
ref|XP_003617724.1| Pentatricopeptide repeat-containing protein ...   171   6e-41

>emb|CBI26162.3| unnamed protein product [Vitis vinifera]
          Length = 636

 Score =  174 bits (440), Expect = 9e-42
 Identities = 84/175 (48%), Positives = 114/175 (65%)
 Frame = +3

Query: 3   PDIGSLELFVVCLCEDGDVDEGFEFFLYLRKAGYVPSLGVCNNMLSGCLGAERSDVVWKF 182
           P   SLE ++ CLC+ G V+E    F  L+  G   S+   N++L G + A R D VW+ 
Sbjct: 190 PKPASLEAYIRCLCKGGLVEEAISVFGQLKGIGVCASIATWNSVLRGSVRAGRIDFVWEL 249

Query: 183 YGEMMECGLGGDADTVGYLIRAYCADNKCFEAYELLKQVLESGFVPHGIVFCKLIARFCK 362
           YGEM+E  +  D  TVGYL++A+C +N+  + + LL++VLE G VP    F KLI+ FCK
Sbjct: 250 YGEMVESSVVADVHTVGYLVQAFCDENRISDGHNLLRRVLEDGVVPRNAAFNKLISGFCK 309

Query: 363 ARDYGKVSELLHLMIAKNCAPTIFTYQEIIYGLCNNQMGAEAFRVFNALKEKGYA 527
            + YG+VS+LLH MIA+N AP IFTYQE++ GLC    G E FRVF  LK++GYA
Sbjct: 310 DKAYGRVSDLLHSMIARNRAPDIFTYQEVVNGLCKGGKGPEGFRVFKDLKDRGYA 364



 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 48/208 (23%), Positives = 84/208 (40%), Gaps = 35/208 (16%)
 Frame = +3

Query: 3   PDIGSLELFVVCLCEDGDVDEGFEFFLYLRKAGYVPSL--------GVC----------- 125
           PDI + +  V  LC+ G   EGF  F  L+  GY P          G+C           
Sbjct: 330 PDIFTYQEVVNGLCKGGKGPEGFRVFKDLKDRGYAPDRVMYTTMIHGLCRMKWLGDARKL 389

Query: 126 ----------------NNMLSGCLGAERSDVVWKFYGEMMECGLGGDADTVGYLIRAYCA 257
                           N M+ G       +  WK Y EM + G G    +   +I+  C+
Sbjct: 390 WFEMIQKGFLPNEYTYNAMIHGYFKIGNLEEAWKMYREMCDKGYGEKTVSYNVMIKGLCS 449

Query: 258 DNKCFEAYELLKQVLESGFVPHGIVFCKLIARFCKARDYGKVSELLHLMIAKNCAPTIFT 437
             K  EA++L +++   G + + I +  L+  FCK     + + LL+ ++ +   P+  +
Sbjct: 450 HGKIKEAHDLFEEMSHKGILRNHITYNALVRGFCKEGKIVEGANLLYELLDQGIQPSAAS 509

Query: 438 YQEIIYGLCNNQMGAEAFRVFNALKEKG 521
           Y  +I  LC       A  +++ ++ +G
Sbjct: 510 YAPLIDKLCQEGDMQNAKILWDDMQNRG 537



 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 37/173 (21%), Positives = 73/173 (42%)
 Frame = +3

Query: 6   DIGSLELFVVCLCEDGDVDEGFEFFLYLRKAGYVPSLGVCNNMLSGCLGAERSDVVWKFY 185
           D+ ++   V   C++  + +G      + + G VP     N ++SG    +    V    
Sbjct: 261 DVHTVGYLVQAFCDENRISDGHNLLRRVLEDGVVPRNAAFNKLISGFCKDKAYGRVSDLL 320

Query: 186 GEMMECGLGGDADTVGYLIRAYCADNKCFEAYELLKQVLESGFVPHGIVFCKLIARFCKA 365
             M+      D  T   ++   C   K  E + + K + + G+ P  +++  +I   C+ 
Sbjct: 321 HSMIARNRAPDIFTYQEVVNGLCKGGKGPEGFRVFKDLKDRGYAPDRVMYTTMIHGLCRM 380

Query: 366 RDYGKVSELLHLMIAKNCAPTIFTYQEIIYGLCNNQMGAEAFRVFNALKEKGY 524
           +  G   +L   MI K   P  +TY  +I+G        EA++++  + +KGY
Sbjct: 381 KWLGDARKLWFEMIQKGFLPNEYTYNAMIHGYFKIGNLEEAWKMYREMCDKGY 433


>gb|ABD96889.1| hypothetical protein [Cleome spinosa]
          Length = 719

 Score =  173 bits (438), Expect = 2e-41
 Identities = 86/177 (48%), Positives = 122/177 (68%), Gaps = 2/177 (1%)
 Frame = +3

Query: 3   PDIGSLELFVVCLCEDGDVDEGFEFFLYLRKAGYVPSLGVCNNMLSGCLGAERSDVVWKF 182
           PD  SLE +V CLC  G ++E  E +  L++AG   S+  CN++LSGCL A +++++++F
Sbjct: 154 PDSASLEQYVKCLCGVGFIEEAIEVYFQLKEAGIRISIVACNSILSGCLKAGKTELLFEF 213

Query: 183 YGEMMECGLGGDA--DTVGYLIRAYCADNKCFEAYELLKQVLESGFVPHGIVFCKLIARF 356
           Y EM++ G   DA  +TVG LI+A+C   +    YELL Q L++G  P    + KLIA F
Sbjct: 214 YQEMIKAGTASDANTETVGCLIQAFCDSGQVARGYELLNQFLKTGLDPGNPTYNKLIAGF 273

Query: 357 CKARDYGKVSELLHLMIAKNCAPTIFTYQEIIYGLCNNQMGAEAFRVFNALKEKGYA 527
           C+A++Y  +SE+LH MIA+N  PTI+TYQEII GLC N+   EA+RVFN LK++GYA
Sbjct: 274 CQAKNYASMSEVLHTMIARNHLPTIYTYQEIINGLCKNEECLEAYRVFNDLKDRGYA 330



 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 49/173 (28%), Positives = 77/173 (44%)
 Frame = +3

Query: 3   PDIGSLELFVVCLCEDGDVDEGFEFFLYLRKAGYVPSLGVCNNMLSGCLGAERSDVVWKF 182
           P +   EL ++  C+DGD +        +   G  P+    + ML G L +   + V + 
Sbjct: 471 PSVSLYELLIIKSCKDGDFEAAKRLLGDMSSKGLHPNAYTYDTMLHGSLKSGDFEHVREL 530

Query: 183 YGEMMECGLGGDADTVGYLIRAYCADNKCFEAYELLKQVLESGFVPHGIVFCKLIARFCK 362
           Y E    G G    T   +I   C+  K  EA E+ K++ E+G     I +  LI  FCK
Sbjct: 531 YNETCNKGYGTTTATCNKIISELCSRGKSDEASEMFKKMSETGIKADAITYNSLIRGFCK 590

Query: 363 ARDYGKVSELLHLMIAKNCAPTIFTYQEIIYGLCNNQMGAEAFRVFNALKEKG 521
               GK   LL+ ++A+   P+  +Y  +I  LC N     A R++  +  KG
Sbjct: 591 EGKVGKSMNLLNELVAQGLQPSASSYASLIIQLCQNGDAESAKRLWGDMVSKG 643



 Score = 71.6 bits (174), Expect = 7e-11
 Identities = 42/160 (26%), Positives = 72/160 (45%)
 Frame = +3

Query: 45  EDGDVDEGFEFFLYLRKAGYVPSLGVCNNMLSGCLGAERSDVVWKFYGEMMECGLGGDAD 224
           + GD +   E +  +   GY  +   CN ++S      +SD  ++ + +M E G+  DA 
Sbjct: 380 KSGDFERACELYNEMCNKGYGTTTVTCNKIISELCSRGKSDEAFEVFKKMSETGIQADAI 439

Query: 225 TVGYLIRAYCADNKCFEAYELLKQVLESGFVPHGIVFCKLIARFCKARDYGKVSELLHLM 404
           T   LIR +C + K  E   LL +++     P   ++  LI + CK  D+     LL  M
Sbjct: 440 TYNSLIRGFCKEGKVDERMNLLNELVAQDPQPSVSLYELLIIKSCKDGDFEAAKRLLGDM 499

Query: 405 IAKNCAPTIFTYQEIIYGLCNNQMGAEAFRVFNALKEKGY 524
            +K   P  +TY  +++G   +        ++N    KGY
Sbjct: 500 SSKGLHPNAYTYDTMLHGSLKSGDFEHVRELYNETCNKGY 539



 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 44/161 (27%), Positives = 72/161 (44%)
 Frame = +3

Query: 39  LCEDGDVDEGFEFFLYLRKAGYVPSLGVCNNMLSGCLGAERSDVVWKFYGEMMECGLGGD 218
           LCE G   E  + +  +   G  P+    N ML G L +   +   + Y EM   G G  
Sbjct: 343 LCEMGSFGEARKLWFEMMDKGMQPNAYTYNTMLHGSLKSGDFERACELYNEMCNKGYGTT 402

Query: 219 ADTVGYLIRAYCADNKCFEAYELLKQVLESGFVPHGIVFCKLIARFCKARDYGKVSELLH 398
             T   +I   C+  K  EA+E+ K++ E+G     I +  LI  FCK     +   LL+
Sbjct: 403 TVTCNKIISELCSRGKSDEAFEVFKKMSETGIQADAITYNSLIRGFCKEGKVDERMNLLN 462

Query: 399 LMIAKNCAPTIFTYQEIIYGLCNNQMGAEAFRVFNALKEKG 521
            ++A++  P++  Y+ +I   C +     A R+   +  KG
Sbjct: 463 ELVAQDPQPSVSLYELLIIKSCKDGDFEAAKRLLGDMSSKG 503



 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 41/159 (25%), Positives = 68/159 (42%), Gaps = 1/159 (0%)
 Frame = +3

Query: 45  EDGDVDEGFEFFLYLRKAGYVPSLGVCNNMLSGCLGAERSDVVWKFYGEMMECGLGGDAD 224
           + GD +   E +      GY  +   CN ++S      +SD   + + +M E G+  DA 
Sbjct: 520 KSGDFEHVRELYNETCNKGYGTTTATCNKIISELCSRGKSDEASEMFKKMSETGIKADAI 579

Query: 225 TVGYLIRAYCADNKCFEAYELLKQVLESGFVPHGIVFCKLIARFCKARDYGKVSELLHLM 404
           T   LIR +C + K  ++  LL +++  G  P    +  LI + C+  D      L   M
Sbjct: 580 TYNSLIRGFCKEGKVGKSMNLLNELVAQGLQPSASSYASLIIQLCQNGDAESAKRLWGDM 639

Query: 405 IAKNCAPTIFTYQEIIYGLCNNQMGAEAF-RVFNALKEK 518
           ++K   P     + +I GLC      E   R+   L+ K
Sbjct: 640 VSKGIEPHANLREHLISGLCKQGRATEGMDRLMGMLENK 678



 Score = 65.9 bits (159), Expect = 4e-09
 Identities = 36/165 (21%), Positives = 70/165 (42%)
 Frame = +3

Query: 30  VVCLCEDGDVDEGFEFFLYLRKAGYVPSLGVCNNMLSGCLGAERSDVVWKFYGEMMECGL 209
           +   C+ G V  G+E      K G  P     N +++G   A+    + +    M+    
Sbjct: 235 IQAFCDSGQVARGYELLNQFLKTGLDPGNPTYNKLIAGFCQAKNYASMSEVLHTMIARNH 294

Query: 210 GGDADTVGYLIRAYCADNKCFEAYELLKQVLESGFVPHGIVFCKLIARFCKARDYGKVSE 389
                T   +I   C + +C EAY +   + + G+ P  +++  +I   C+   +G+  +
Sbjct: 295 LPTIYTYQEIINGLCKNEECLEAYRVFNDLKDRGYAPDRVMYTTMIHGLCEMGSFGEARK 354

Query: 390 LLHLMIAKNCAPTIFTYQEIIYGLCNNQMGAEAFRVFNALKEKGY 524
           L   M+ K   P  +TY  +++G   +     A  ++N +  KGY
Sbjct: 355 LWFEMMDKGMQPNAYTYNTMLHGSLKSGDFERACELYNEMCNKGY 399


>ref|XP_004155892.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g18950-like [Cucumis sativus]
          Length = 638

 Score =  172 bits (436), Expect = 3e-41
 Identities = 89/177 (50%), Positives = 114/177 (64%), Gaps = 2/177 (1%)
 Frame = +3

Query: 3   PDIGSLELFVVCLCEDGDVDEGFEFFLYLRKAGYVPSLGVCNNMLSGCLGAERSDVVWKF 182
           P+  SLE ++ C+CE G V+E    F  L++AGY P +   N     CL   R+D++WK 
Sbjct: 189 PEPASLENYIRCVCEGGLVEEAVYTFDMLKEAGYRPYVETWNFAFQSCLKFGRTDLIWKL 248

Query: 183 YGEMMECGLGGDAD--TVGYLIRAYCADNKCFEAYELLKQVLESGFVPHGIVFCKLIARF 356
           Y  MME G+  D D  TVGYLI+A+C DNK   AYE+L+Q LE G  P    F KLI+ F
Sbjct: 249 YEGMMETGVQKDVDIETVGYLIQAFCNDNKVSRAYEILRQSLEDGLTPCNDAFNKLISGF 308

Query: 357 CKARDYGKVSELLHLMIAKNCAPTIFTYQEIIYGLCNNQMGAEAFRVFNALKEKGYA 527
           CK +++ +V EL+H MI KN  P IFTYQEII G C N M  +AF VFNALK++GYA
Sbjct: 309 CKEKNHHRVLELVHTMIVKNRNPDIFTYQEIINGFCKNWMTLQAFEVFNALKDRGYA 365



 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 41/173 (23%), Positives = 72/173 (41%)
 Frame = +3

Query: 6   DIGSLELFVVCLCEDGDVDEGFEFFLYLRKAGYVPSLGVCNNMLSGCLGAERSDVVWKFY 185
           DI ++   +   C D  V   +E      + G  P     N ++SG    +    V +  
Sbjct: 262 DIETVGYLIQAFCNDNKVSRAYEILRQSLEDGLTPCNDAFNKLISGFCKEKNHHRVLELV 321

Query: 186 GEMMECGLGGDADTVGYLIRAYCADNKCFEAYELLKQVLESGFVPHGIVFCKLIARFCKA 365
             M+      D  T   +I  +C +    +A+E+   + + G+ P  +++  LI  FCK 
Sbjct: 322 HTMIVKNRNPDIFTYQEIINGFCKNWMTLQAFEVFNALKDRGYAPDMVMYTTLIHGFCKM 381

Query: 366 RDYGKVSELLHLMIAKNCAPTIFTYQEIIYGLCNNQMGAEAFRVFNALKEKGY 524
                 S+L   MI K   P  ++Y  +IYG C      EA +++  + + GY
Sbjct: 382 GQLEDASKLWFEMIDKGFLPNEYSYNTLIYGFCKIGNLDEAMKLYKKMLDSGY 434



 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 39/154 (25%), Positives = 71/154 (46%)
 Frame = +3

Query: 3   PDIGSLELFVVCLCEDGDVDEGFEFFLYLRKAGYVPSLGVCNNMLSGCLGAERSDVVWKF 182
           P+  S    +   C+ G++DE  + +  +  +GY  +   CN ++ G     R+D  + F
Sbjct: 401 PNEYSYNTLIYGFCKIGNLDEAMKLYKKMLDSGYKETTLSCNTLILGLCLHGRTDEAYDF 460

Query: 183 YGEMMECGLGGDADTVGYLIRAYCADNKCFEAYELLKQVLESGFVPHGIVFCKLIARFCK 362
           + EM    +  D  T   LI+ +C + K  ++ +LLK++   G  P    +  LI + C+
Sbjct: 461 FREMPCKNIVCDVITYNTLIQGFCREGKVLQSTDLLKELQAKGLQPSTSSYAHLIQKLCQ 520

Query: 363 ARDYGKVSELLHLMIAKNCAPTIFTYQEIIYGLC 464
                +  E+ + M  +   P + T   II GLC
Sbjct: 521 LGSVQEAKEMWNDMHNRGLQPMVCTRDHIISGLC 554



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 40/173 (23%), Positives = 73/173 (42%)
 Frame = +3

Query: 3   PDIGSLELFVVCLCEDGDVDEGFEFFLYLRKAGYVPSLGVCNNMLSGCLGAERSDVVWKF 182
           PDI + +  +   C++    + FE F  L+  GY P + +   ++ G     + +   K 
Sbjct: 331 PDIFTYQEIINGFCKNWMTLQAFEVFNALKDRGYAPDMVMYTTLIHGFCKMGQLEDASKL 390

Query: 183 YGEMMECGLGGDADTVGYLIRAYCADNKCFEAYELLKQVLESGFVPHGIVFCKLIARFCK 362
           + EM++ G   +  +   LI  +C      EA +L K++L+SG+    +    LI   C 
Sbjct: 391 WFEMIDKGFLPNEYSYNTLIYGFCKIGNLDEAMKLYKKMLDSGYKETTLSCNTLILGLCL 450

Query: 363 ARDYGKVSELLHLMIAKNCAPTIFTYQEIIYGLCNNQMGAEAFRVFNALKEKG 521
                +  +    M  KN    + TY  +I G C      ++  +   L+ KG
Sbjct: 451 HGRTDEAYDFFREMPCKNIVCDVITYNTLIQGFCREGKVLQSTDLLKELQAKG 503



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 38/173 (21%), Positives = 74/173 (42%)
 Frame = +3

Query: 3   PDIGSLELFVVCLCEDGDVDEGFEFFLYLRKAGYVPSLGVCNNMLSGCLGAERSDVVWKF 182
           PD+      +   C+ G +++  + +  +   G++P+    N ++ G       D   K 
Sbjct: 366 PDMVMYTTLIHGFCKMGQLEDASKLWFEMIDKGFLPNEYSYNTLIYGFCKIGNLDEAMKL 425

Query: 183 YGEMMECGLGGDADTVGYLIRAYCADNKCFEAYELLKQVLESGFVPHGIVFCKLIARFCK 362
           Y +M++ G      +   LI   C   +  EAY+  +++     V   I +  LI  FC+
Sbjct: 426 YKKMLDSGYKETTLSCNTLILGLCLHGRTDEAYDFFREMPCKNIVCDVITYNTLIQGFCR 485

Query: 363 ARDYGKVSELLHLMIAKNCAPTIFTYQEIIYGLCNNQMGAEAFRVFNALKEKG 521
                + ++LL  + AK   P+  +Y  +I  LC      EA  ++N +  +G
Sbjct: 486 EGKVLQSTDLLKELQAKGLQPSTSSYAHLIQKLCQLGSVQEAKEMWNDMHNRG 538


>ref|XP_004134313.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g18950-like [Cucumis sativus]
          Length = 602

 Score =  172 bits (436), Expect = 3e-41
 Identities = 89/177 (50%), Positives = 114/177 (64%), Gaps = 2/177 (1%)
 Frame = +3

Query: 3   PDIGSLELFVVCLCEDGDVDEGFEFFLYLRKAGYVPSLGVCNNMLSGCLGAERSDVVWKF 182
           P+  SLE ++ C+CE G V+E    F  L++AGY P +   N     CL   R+D++WK 
Sbjct: 153 PEPASLENYIRCVCEGGLVEEAVYTFDMLKEAGYRPYVETWNFAFQSCLKFGRTDLIWKL 212

Query: 183 YGEMMECGLGGDAD--TVGYLIRAYCADNKCFEAYELLKQVLESGFVPHGIVFCKLIARF 356
           Y  MME G+  D D  TVGYLI+A+C DNK   AYE+L+Q LE G  P    F KLI+ F
Sbjct: 213 YEGMMETGVQKDVDIETVGYLIQAFCNDNKVSRAYEILRQSLEDGLTPCNDAFNKLISGF 272

Query: 357 CKARDYGKVSELLHLMIAKNCAPTIFTYQEIIYGLCNNQMGAEAFRVFNALKEKGYA 527
           CK +++ +V EL+H MI KN  P IFTYQEII G C N M  +AF VFNALK++GYA
Sbjct: 273 CKEKNHHRVLELVHTMIVKNRNPDIFTYQEIINGFCKNWMTLQAFEVFNALKDRGYA 329



 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 41/173 (23%), Positives = 72/173 (41%)
 Frame = +3

Query: 6   DIGSLELFVVCLCEDGDVDEGFEFFLYLRKAGYVPSLGVCNNMLSGCLGAERSDVVWKFY 185
           DI ++   +   C D  V   +E      + G  P     N ++SG    +    V +  
Sbjct: 226 DIETVGYLIQAFCNDNKVSRAYEILRQSLEDGLTPCNDAFNKLISGFCKEKNHHRVLELV 285

Query: 186 GEMMECGLGGDADTVGYLIRAYCADNKCFEAYELLKQVLESGFVPHGIVFCKLIARFCKA 365
             M+      D  T   +I  +C +    +A+E+   + + G+ P  +++  LI  FCK 
Sbjct: 286 HTMIVKNRNPDIFTYQEIINGFCKNWMTLQAFEVFNALKDRGYAPDMVMYTTLIHGFCKM 345

Query: 366 RDYGKVSELLHLMIAKNCAPTIFTYQEIIYGLCNNQMGAEAFRVFNALKEKGY 524
                 S+L   MI K   P  ++Y  +IYG C      EA +++  + + GY
Sbjct: 346 GQLEDASKLWFEMIDKGFLPNEYSYNTLIYGFCKIGNLDEAMKLYKKMLDSGY 398



 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 39/154 (25%), Positives = 71/154 (46%)
 Frame = +3

Query: 3   PDIGSLELFVVCLCEDGDVDEGFEFFLYLRKAGYVPSLGVCNNMLSGCLGAERSDVVWKF 182
           P+  S    +   C+ G++DE  + +  +  +GY  +   CN ++ G     R+D  + F
Sbjct: 365 PNEYSYNTLIYGFCKIGNLDEAMKLYKKMLDSGYKETTLSCNTLILGLCLHGRTDEAYDF 424

Query: 183 YGEMMECGLGGDADTVGYLIRAYCADNKCFEAYELLKQVLESGFVPHGIVFCKLIARFCK 362
           + EM    +  D  T   LI+ +C + K  ++ +LLK++   G  P    +  LI + C+
Sbjct: 425 FREMPCKNIVCDVITYNTLIQGFCREGKVLQSTDLLKELQAKGLQPSTSSYAHLIQKLCQ 484

Query: 363 ARDYGKVSELLHLMIAKNCAPTIFTYQEIIYGLC 464
                +  E+ + M  +   P + T   II GLC
Sbjct: 485 LGSVQEAKEMWNDMHNRGLQPMVCTRDHIISGLC 518



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 40/173 (23%), Positives = 73/173 (42%)
 Frame = +3

Query: 3   PDIGSLELFVVCLCEDGDVDEGFEFFLYLRKAGYVPSLGVCNNMLSGCLGAERSDVVWKF 182
           PDI + +  +   C++    + FE F  L+  GY P + +   ++ G     + +   K 
Sbjct: 295 PDIFTYQEIINGFCKNWMTLQAFEVFNALKDRGYAPDMVMYTTLIHGFCKMGQLEDASKL 354

Query: 183 YGEMMECGLGGDADTVGYLIRAYCADNKCFEAYELLKQVLESGFVPHGIVFCKLIARFCK 362
           + EM++ G   +  +   LI  +C      EA +L K++L+SG+    +    LI   C 
Sbjct: 355 WFEMIDKGFLPNEYSYNTLIYGFCKIGNLDEAMKLYKKMLDSGYKETTLSCNTLILGLCL 414

Query: 363 ARDYGKVSELLHLMIAKNCAPTIFTYQEIIYGLCNNQMGAEAFRVFNALKEKG 521
                +  +    M  KN    + TY  +I G C      ++  +   L+ KG
Sbjct: 415 HGRTDEAYDFFREMPCKNIVCDVITYNTLIQGFCREGKVLQSTDLLKELQAKG 467



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 38/173 (21%), Positives = 74/173 (42%)
 Frame = +3

Query: 3   PDIGSLELFVVCLCEDGDVDEGFEFFLYLRKAGYVPSLGVCNNMLSGCLGAERSDVVWKF 182
           PD+      +   C+ G +++  + +  +   G++P+    N ++ G       D   K 
Sbjct: 330 PDMVMYTTLIHGFCKMGQLEDASKLWFEMIDKGFLPNEYSYNTLIYGFCKIGNLDEAMKL 389

Query: 183 YGEMMECGLGGDADTVGYLIRAYCADNKCFEAYELLKQVLESGFVPHGIVFCKLIARFCK 362
           Y +M++ G      +   LI   C   +  EAY+  +++     V   I +  LI  FC+
Sbjct: 390 YKKMLDSGYKETTLSCNTLILGLCLHGRTDEAYDFFREMPCKNIVCDVITYNTLIQGFCR 449

Query: 363 ARDYGKVSELLHLMIAKNCAPTIFTYQEIIYGLCNNQMGAEAFRVFNALKEKG 521
                + ++LL  + AK   P+  +Y  +I  LC      EA  ++N +  +G
Sbjct: 450 EGKVLQSTDLLKELQAKGLQPSTSSYAHLIQKLCQLGSVQEAKEMWNDMHNRG 502


>ref|XP_003617724.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355519059|gb|AET00683.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 861

 Score =  171 bits (433), Expect = 6e-41
 Identities = 90/176 (51%), Positives = 116/176 (65%), Gaps = 2/176 (1%)
 Frame = +3

Query: 3   PDIGSLELFVVCLCEDGDVDEGFEFFLYLRKAGYVPSLGVCNNMLSGCLGAERSDVVWKF 182
           P   SLE +V  L E+G V+E F+ F+ L+K G++PS    N  L  CL   R+D+VWK 
Sbjct: 127 PKNDSLEGYVRLLGENGMVEEVFDVFVSLKKVGFLPSASSFNVCLLACLKVGRTDLVWKL 186

Query: 183 YGEMMECGLGG--DADTVGYLIRAYCADNKCFEAYELLKQVLESGFVPHGIVFCKLIARF 356
           Y  M+E G+G   D +TVG LI+A+CA+NK F  YELL+QVLE G      VF  LI  F
Sbjct: 187 YELMIESGVGVNIDVETVGCLIKAFCAENKVFNGYELLRQVLEKGLCVDNTVFNALINGF 246

Query: 357 CKARDYGKVSELLHLMIAKNCAPTIFTYQEIIYGLCNNQMGAEAFRVFNALKEKGY 524
           CK + Y +VSE+LH+MIA  C P+I+TYQEII GL   +   EAFRVFN LK++GY
Sbjct: 247 CKQKQYDRVSEILHIMIAMKCNPSIYTYQEIINGLLKRRKNDEAFRVFNDLKDRGY 302



 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 33/140 (23%), Positives = 68/140 (48%)
 Frame = +3

Query: 108 PSLGVCNNMLSGCLGAERSDVVWKFYGEMMECGLGGDADTVGYLIRAYCADNKCFEAYEL 287
           PS+     +++G L   ++D  ++ + ++ + G   D      +I+ +C      EA +L
Sbjct: 269 PSIYTYQEIINGLLKRRKNDEAFRVFNDLKDRGYFPDRVMYTTVIKGFCDMGLLAEARKL 328

Query: 288 LKQVLESGFVPHGIVFCKLIARFCKARDYGKVSELLHLMIAKNCAPTIFTYQEIIYGLCN 467
             ++++ G VP+   +  +I  +CK RD+ +  +L   M  +  A  + +Y  +I GL  
Sbjct: 329 WFEMIQKGLVPNEYTYNVMIYGYCKVRDFAEARKLYDDMCGRGYAENVVSYSTMISGLYL 388

Query: 468 NQMGAEAFRVFNALKEKGYA 527
           +    EA  +F+ +  KG A
Sbjct: 389 HGKTDEALSLFHEMSRKGIA 408