BLASTX nr result

ID: Coptis25_contig00044249 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00044249
         (340 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24922.3| unnamed protein product [Vitis vinifera]              171   6e-41
ref|XP_002274267.1| PREDICTED: DNA topoisomerase 2-like [Vitis v...   171   6e-41
ref|XP_002972906.1| hypothetical protein SELMODRAFT_98330 [Selag...   169   2e-40
ref|XP_002988023.1| hypothetical protein SELMODRAFT_127267 [Sela...   169   2e-40
ref|XP_002994651.1| hypothetical protein SELMODRAFT_138946 [Sela...   169   2e-40

>emb|CBI24922.3| unnamed protein product [Vitis vinifera]
          Length = 1452

 Score =  171 bits (433), Expect = 6e-41
 Identities = 82/113 (72%), Positives = 99/113 (87%)
 Frame = +2

Query: 2   DNPAFDSQTKETLTIRQTSFGSKCDLSTKFLNKVATSGLEALVKDWADAKRAKDLKKTDG 181
           DNPAFDSQTKETLTIRQ+SFGSKC+LS +FL KV+ SG+   +  WAD K+ KDLKKTDG
Sbjct: 365 DNPAFDSQTKETLTIRQSSFGSKCELSQEFLKKVSKSGVVESLLSWADYKQNKDLKKTDG 424

Query: 182 KRKGRITGLAKLDDANEAGGKNSEECTLILTEGDSAKSLALAGISVVGRNRYG 340
            ++ R+TG+ KL+DAN+AGG+NSE+CTLILTEGDSAK+LA+AGISVVGRN YG
Sbjct: 425 TKRQRLTGITKLEDANDAGGRNSEKCTLILTEGDSAKALAMAGISVVGRNHYG 477


>ref|XP_002274267.1| PREDICTED: DNA topoisomerase 2-like [Vitis vinifera]
          Length = 1489

 Score =  171 bits (433), Expect = 6e-41
 Identities = 82/113 (72%), Positives = 99/113 (87%)
 Frame = +2

Query: 2   DNPAFDSQTKETLTIRQTSFGSKCDLSTKFLNKVATSGLEALVKDWADAKRAKDLKKTDG 181
           DNPAFDSQTKETLTIRQ+SFGSKC+LS +FL KV+ SG+   +  WAD K+ KDLKKTDG
Sbjct: 365 DNPAFDSQTKETLTIRQSSFGSKCELSQEFLKKVSKSGVVESLLSWADYKQNKDLKKTDG 424

Query: 182 KRKGRITGLAKLDDANEAGGKNSEECTLILTEGDSAKSLALAGISVVGRNRYG 340
            ++ R+TG+ KL+DAN+AGG+NSE+CTLILTEGDSAK+LA+AGISVVGRN YG
Sbjct: 425 TKRQRLTGITKLEDANDAGGRNSEKCTLILTEGDSAKALAMAGISVVGRNHYG 477


>ref|XP_002972906.1| hypothetical protein SELMODRAFT_98330 [Selaginella moellendorffii]
           gi|300159507|gb|EFJ26127.1| hypothetical protein
           SELMODRAFT_98330 [Selaginella moellendorffii]
          Length = 1151

 Score =  169 bits (428), Expect = 2e-40
 Identities = 82/113 (72%), Positives = 97/113 (85%)
 Frame = +2

Query: 2   DNPAFDSQTKETLTIRQTSFGSKCDLSTKFLNKVATSGLEALVKDWADAKRAKDLKKTDG 181
           DNPAFDSQTKETLT RQTSFGSKC+LS +FL KV+  G+   V  WAD K++K+LKK DG
Sbjct: 353 DNPAFDSQTKETLTTRQTSFGSKCELSPEFLKKVSKCGVVDNVLSWADFKQSKELKKNDG 412

Query: 182 KRKGRITGLAKLDDANEAGGKNSEECTLILTEGDSAKSLALAGISVVGRNRYG 340
            ++ R+TG+AKLDDAN+AGGKNSE CTLILTEGDSAK+LA++GISVVGRN YG
Sbjct: 413 AKRQRLTGIAKLDDANDAGGKNSEACTLILTEGDSAKALAMSGISVVGRNHYG 465


>ref|XP_002988023.1| hypothetical protein SELMODRAFT_127267 [Selaginella moellendorffii]
           gi|300144129|gb|EFJ10815.1| hypothetical protein
           SELMODRAFT_127267 [Selaginella moellendorffii]
          Length = 1151

 Score =  169 bits (428), Expect = 2e-40
 Identities = 82/113 (72%), Positives = 97/113 (85%)
 Frame = +2

Query: 2   DNPAFDSQTKETLTIRQTSFGSKCDLSTKFLNKVATSGLEALVKDWADAKRAKDLKKTDG 181
           DNPAFDSQTKETLT RQTSFGSKC+LS +FL KV+  G+   V  WAD K++K+LKK DG
Sbjct: 353 DNPAFDSQTKETLTTRQTSFGSKCELSPEFLKKVSKCGVVDNVLSWADFKQSKELKKNDG 412

Query: 182 KRKGRITGLAKLDDANEAGGKNSEECTLILTEGDSAKSLALAGISVVGRNRYG 340
            ++ R+TG+AKLDDAN+AGGKNSE CTLILTEGDSAK+LA++GISVVGRN YG
Sbjct: 413 AKRQRLTGIAKLDDANDAGGKNSEACTLILTEGDSAKALAMSGISVVGRNHYG 465


>ref|XP_002994651.1| hypothetical protein SELMODRAFT_138946 [Selaginella moellendorffii]
           gi|300137231|gb|EFJ04283.1| hypothetical protein
           SELMODRAFT_138946 [Selaginella moellendorffii]
          Length = 980

 Score =  169 bits (428), Expect = 2e-40
 Identities = 82/113 (72%), Positives = 97/113 (85%)
 Frame = +2

Query: 2   DNPAFDSQTKETLTIRQTSFGSKCDLSTKFLNKVATSGLEALVKDWADAKRAKDLKKTDG 181
           DNPAFDSQTKETLT RQTSFGSKC+LS +FL KV+  G+   V  WAD K++K+LKK DG
Sbjct: 182 DNPAFDSQTKETLTTRQTSFGSKCELSPEFLKKVSKCGVVDNVLSWADFKQSKELKKNDG 241

Query: 182 KRKGRITGLAKLDDANEAGGKNSEECTLILTEGDSAKSLALAGISVVGRNRYG 340
            ++ R+TG+AKLDDAN+AGGKNSE CTLILTEGDSAK+LA++GISVVGRN YG
Sbjct: 242 AKRQRLTGIAKLDDANDAGGKNSEACTLILTEGDSAKALAMSGISVVGRNHYG 294


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