BLASTX nr result
ID: Coptis25_contig00044241
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00044241 (400 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CCA66188.1| hypothetical protein [Beta vulgaris subsp. vulga... 76 9e-15 emb|CAN82094.1| hypothetical protein VITISV_031210 [Vitis vinifera] 81 2e-14 emb|CAN82685.1| hypothetical protein VITISV_000485 [Vitis vinifera] 77 3e-14 emb|CAN82440.1| hypothetical protein VITISV_006122 [Vitis vinifera] 83 3e-14 emb|CAN73982.1| hypothetical protein VITISV_007640 [Vitis vinifera] 82 3e-14 >emb|CCA66188.1| hypothetical protein [Beta vulgaris subsp. vulgaris] Length = 1381 Score = 75.9 bits (185), Expect(2) = 9e-15 Identities = 37/83 (44%), Positives = 53/83 (63%) Frame = -2 Query: 252 YYLSLFPIPVGVARHLVKLSRWFLWSGEQGKTKIHMVKWDRLCLPKEEECLGCKHILLMN 73 YY+SLFP P GV + KL R FLWSGE K+ + +V W+++ LPKE L C ++L N Sbjct: 799 YYMSLFPAPRGVIEAINKLQRNFLWSGELRKSSLALVAWNQVVLPKESGGLNCGNLLNRN 858 Query: 72 KALLSK*LWRYGEEDKHLRRKVV 4 +LL K +WR + + L +KV+ Sbjct: 859 ISLLFKWIWRLSHDPESLWQKVI 881 Score = 28.9 bits (63), Expect(2) = 9e-15 Identities = 12/22 (54%), Positives = 14/22 (63%) Frame = -3 Query: 344 VESKLVGWKTNCLSIRGRCTLV 279 +E KL WK LSI GR TL+ Sbjct: 768 IEGKLASWKGRMLSIAGRITLI 789 >emb|CAN82094.1| hypothetical protein VITISV_031210 [Vitis vinifera] Length = 1501 Score = 80.9 bits (198), Expect(2) = 2e-14 Identities = 38/83 (45%), Positives = 53/83 (63%) Frame = -2 Query: 252 YYLSLFPIPVGVARHLVKLSRWFLWSGEQGKTKIHMVKWDRLCLPKEEECLGCKHILLMN 73 Y +SLF +P VAR L KL R FLW G G K H+VKW+ +C KE+ LG + ++ +N Sbjct: 1232 YQMSLFRMPKSVARRLEKLQRDFLWEGANGWNKAHLVKWEVVCADKEKGGLGLRKLVCLN 1291 Query: 72 KALLSK*LWRYGEEDKHLRRKVV 4 KALL K +WR+ + L +KV+ Sbjct: 1292 KALLGKWIWRFARAKEELWKKVL 1314 Score = 22.7 bits (47), Expect(2) = 2e-14 Identities = 14/34 (41%), Positives = 16/34 (47%), Gaps = 6/34 (17%) Frame = -3 Query: 362 RTWSAW------VESKLVGWKTNCLSIRGRCTLV 279 R SAW V +L WK LS GR TL+ Sbjct: 1189 RASSAWDGVXEKVRRRLALWKRQYLSKGGRITLI 1222 >emb|CAN82685.1| hypothetical protein VITISV_000485 [Vitis vinifera] Length = 1563 Score = 77.0 bits (188), Expect(2) = 3e-14 Identities = 42/99 (42%), Positives = 57/99 (57%) Frame = -2 Query: 297 GKVHLGQLYSFHYSNYYLSLFPIPVGVARHLVKLSRWFLWSGEQGKTKIHMVKWDRLCLP 118 G++ L Q H +Y++SLF IP +A + K+ R FLWSG + K H+V+W+ + P Sbjct: 735 GRITLIQSCLSHIPSYFISLFKIPASIASKIEKMQRNFLWSGAGEEKKDHLVRWEVVSRP 794 Query: 117 KEEECLGCKHILLMNKALLSK*LWRYGEEDKHLRRKVVV 1 KE LG I L N ALL K LWR+ E L KV+V Sbjct: 795 KELGGLGFGKISLRNIALLGKWLWRFPRERSGLWHKVIV 833 Score = 26.2 bits (56), Expect(2) = 3e-14 Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 3/33 (9%) Frame = -3 Query: 368 TLRTWSAWVES---KLVGWKTNCLSIRGRCTLV 279 T+ W VE +L GWK LS+ GR TL+ Sbjct: 708 TIGFWDLVVERISRRLDGWKKTYLSLGGRITLI 740 >emb|CAN82440.1| hypothetical protein VITISV_006122 [Vitis vinifera] Length = 1030 Score = 82.8 bits (203), Expect = 3e-14 Identities = 43/114 (37%), Positives = 65/114 (57%), Gaps = 7/114 (6%) Frame = -2 Query: 324 MENKLSFYK-------GKVHLGQLYSFHYSNYYLSLFPIPVGVARHLVKLSRWFLWSGEQ 166 M KL+ +K G++ L + Y +SLF +P VAR L KL R FLW G Sbjct: 594 MRRKLALWKRQFLSKGGRIXLIKSTLASIPLYQMSLFRMPKSVARRLEKLQRNFLWGGAN 653 Query: 165 GKTKIHMVKWDRLCLPKEEECLGCKHILLMNKALLSK*LWRYGEEDKHLRRKVV 4 G K+H++KW+ +C KE+ LG + ++ +NKALL K +WR+ + L +KV+ Sbjct: 654 GGNKVHLIKWEVVCADKEKGGLGLRKLIWLNKALLGKWIWRFARAKEELWKKVL 707 >emb|CAN73982.1| hypothetical protein VITISV_007640 [Vitis vinifera] Length = 1927 Score = 82.4 bits (202), Expect = 3e-14 Identities = 46/109 (42%), Positives = 60/109 (55%) Frame = -2 Query: 327 GMENKLSFYKGKVHLGQLYSFHYSNYYLSLFPIPVGVARHLVKLSRWFLWSGEQGKTKIH 148 G + + G++ L Q H YYLSLF +P VA + +L R FLWSG K H Sbjct: 1489 GWQKAYLSFXGRITLIQSCLTHMPCYYLSLFKLPASVAAKIERLQRDFLWSGIGEXKKDH 1548 Query: 147 MVKWDRLCLPKEEECLGCKHILLMNKALLSK*LWRYGEEDKHLRRKVVV 1 +V+WD +C PKE LG +I L N ALL K LWRY E L +V++ Sbjct: 1549 LVRWDVVCKPKEIGGLGFGNISLRNLALLGKWLWRYPREGSALWHQVIL 1597