BLASTX nr result

ID: Coptis25_contig00044241 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00044241
         (400 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA66188.1| hypothetical protein [Beta vulgaris subsp. vulga...    76   9e-15
emb|CAN82094.1| hypothetical protein VITISV_031210 [Vitis vinifera]    81   2e-14
emb|CAN82685.1| hypothetical protein VITISV_000485 [Vitis vinifera]    77   3e-14
emb|CAN82440.1| hypothetical protein VITISV_006122 [Vitis vinifera]    83   3e-14
emb|CAN73982.1| hypothetical protein VITISV_007640 [Vitis vinifera]    82   3e-14

>emb|CCA66188.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1381

 Score = 75.9 bits (185), Expect(2) = 9e-15
 Identities = 37/83 (44%), Positives = 53/83 (63%)
 Frame = -2

Query: 252  YYLSLFPIPVGVARHLVKLSRWFLWSGEQGKTKIHMVKWDRLCLPKEEECLGCKHILLMN 73
            YY+SLFP P GV   + KL R FLWSGE  K+ + +V W+++ LPKE   L C ++L  N
Sbjct: 799  YYMSLFPAPRGVIEAINKLQRNFLWSGELRKSSLALVAWNQVVLPKESGGLNCGNLLNRN 858

Query: 72   KALLSK*LWRYGEEDKHLRRKVV 4
             +LL K +WR   + + L +KV+
Sbjct: 859  ISLLFKWIWRLSHDPESLWQKVI 881



 Score = 28.9 bits (63), Expect(2) = 9e-15
 Identities = 12/22 (54%), Positives = 14/22 (63%)
 Frame = -3

Query: 344 VESKLVGWKTNCLSIRGRCTLV 279
           +E KL  WK   LSI GR TL+
Sbjct: 768 IEGKLASWKGRMLSIAGRITLI 789


>emb|CAN82094.1| hypothetical protein VITISV_031210 [Vitis vinifera]
          Length = 1501

 Score = 80.9 bits (198), Expect(2) = 2e-14
 Identities = 38/83 (45%), Positives = 53/83 (63%)
 Frame = -2

Query: 252  YYLSLFPIPVGVARHLVKLSRWFLWSGEQGKTKIHMVKWDRLCLPKEEECLGCKHILLMN 73
            Y +SLF +P  VAR L KL R FLW G  G  K H+VKW+ +C  KE+  LG + ++ +N
Sbjct: 1232 YQMSLFRMPKSVARRLEKLQRDFLWEGANGWNKAHLVKWEVVCADKEKGGLGLRKLVCLN 1291

Query: 72   KALLSK*LWRYGEEDKHLRRKVV 4
            KALL K +WR+    + L +KV+
Sbjct: 1292 KALLGKWIWRFARAKEELWKKVL 1314



 Score = 22.7 bits (47), Expect(2) = 2e-14
 Identities = 14/34 (41%), Positives = 16/34 (47%), Gaps = 6/34 (17%)
 Frame = -3

Query: 362  RTWSAW------VESKLVGWKTNCLSIRGRCTLV 279
            R  SAW      V  +L  WK   LS  GR TL+
Sbjct: 1189 RASSAWDGVXEKVRRRLALWKRQYLSKGGRITLI 1222


>emb|CAN82685.1| hypothetical protein VITISV_000485 [Vitis vinifera]
          Length = 1563

 Score = 77.0 bits (188), Expect(2) = 3e-14
 Identities = 42/99 (42%), Positives = 57/99 (57%)
 Frame = -2

Query: 297  GKVHLGQLYSFHYSNYYLSLFPIPVGVARHLVKLSRWFLWSGEQGKTKIHMVKWDRLCLP 118
            G++ L Q    H  +Y++SLF IP  +A  + K+ R FLWSG   + K H+V+W+ +  P
Sbjct: 735  GRITLIQSCLSHIPSYFISLFKIPASIASKIEKMQRNFLWSGAGEEKKDHLVRWEVVSRP 794

Query: 117  KEEECLGCKHILLMNKALLSK*LWRYGEEDKHLRRKVVV 1
            KE   LG   I L N ALL K LWR+  E   L  KV+V
Sbjct: 795  KELGGLGFGKISLRNIALLGKWLWRFPRERSGLWHKVIV 833



 Score = 26.2 bits (56), Expect(2) = 3e-14
 Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 3/33 (9%)
 Frame = -3

Query: 368 TLRTWSAWVES---KLVGWKTNCLSIRGRCTLV 279
           T+  W   VE    +L GWK   LS+ GR TL+
Sbjct: 708 TIGFWDLVVERISRRLDGWKKTYLSLGGRITLI 740


>emb|CAN82440.1| hypothetical protein VITISV_006122 [Vitis vinifera]
          Length = 1030

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 43/114 (37%), Positives = 65/114 (57%), Gaps = 7/114 (6%)
 Frame = -2

Query: 324 MENKLSFYK-------GKVHLGQLYSFHYSNYYLSLFPIPVGVARHLVKLSRWFLWSGEQ 166
           M  KL+ +K       G++ L +        Y +SLF +P  VAR L KL R FLW G  
Sbjct: 594 MRRKLALWKRQFLSKGGRIXLIKSTLASIPLYQMSLFRMPKSVARRLEKLQRNFLWGGAN 653

Query: 165 GKTKIHMVKWDRLCLPKEEECLGCKHILLMNKALLSK*LWRYGEEDKHLRRKVV 4
           G  K+H++KW+ +C  KE+  LG + ++ +NKALL K +WR+    + L +KV+
Sbjct: 654 GGNKVHLIKWEVVCADKEKGGLGLRKLIWLNKALLGKWIWRFARAKEELWKKVL 707


>emb|CAN73982.1| hypothetical protein VITISV_007640 [Vitis vinifera]
          Length = 1927

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 46/109 (42%), Positives = 60/109 (55%)
 Frame = -2

Query: 327  GMENKLSFYKGKVHLGQLYSFHYSNYYLSLFPIPVGVARHLVKLSRWFLWSGEQGKTKIH 148
            G +     + G++ L Q    H   YYLSLF +P  VA  + +L R FLWSG     K H
Sbjct: 1489 GWQKAYLSFXGRITLIQSCLTHMPCYYLSLFKLPASVAAKIERLQRDFLWSGIGEXKKDH 1548

Query: 147  MVKWDRLCLPKEEECLGCKHILLMNKALLSK*LWRYGEEDKHLRRKVVV 1
            +V+WD +C PKE   LG  +I L N ALL K LWRY  E   L  +V++
Sbjct: 1549 LVRWDVVCKPKEIGGLGFGNISLRNLALLGKWLWRYPREGSALWHQVIL 1597


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