BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00044226
         (339 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24229.3| unnamed protein product [Vitis vinifera]               70   1e-10
ref|XP_002275537.1| PREDICTED: pentatricopeptide repeat-containi...    70   1e-10
emb|CAN83391.1| hypothetical protein VITISV_041405 [Vitis vinifera]    70   1e-10
ref|XP_003545819.1| PREDICTED: pentatricopeptide repeat-containi...    62   6e-08
ref|XP_003530713.1| PREDICTED: pentatricopeptide repeat-containi...    62   6e-08

>emb|CBI24229.3| unnamed protein product [Vitis vinifera]
          Length = 547

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 28/51 (54%), Positives = 42/51 (82%)
 Frame = -2

Query: 338 LKKNPGCSWIEVDKRLNLFFVEDKSHPEVELIHECLANFIRHMDEEELLSY 186
           LKKNPGCSWIEV KR++ F VEDKSHP+ ++I+EC++    H+++ ++LS+
Sbjct: 497 LKKNPGCSWIEVGKRIHPFVVEDKSHPQADMIYECMSILASHVEKYQVLSF 547


>ref|XP_002275537.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27110-like [Vitis vinifera]
          Length = 694

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 28/51 (54%), Positives = 42/51 (82%)
 Frame = -2

Query: 338 LKKNPGCSWIEVDKRLNLFFVEDKSHPEVELIHECLANFIRHMDEEELLSY 186
           LKKNPGCSWIEV KR++ F VEDKSHP+ ++I+EC++    H+++ ++LS+
Sbjct: 644 LKKNPGCSWIEVGKRIHPFVVEDKSHPQADMIYECMSILASHVEKYQVLSF 694


>emb|CAN83391.1| hypothetical protein VITISV_041405 [Vitis vinifera]
          Length = 886

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 28/51 (54%), Positives = 42/51 (82%)
 Frame = -2

Query: 338 LKKNPGCSWIEVDKRLNLFFVEDKSHPEVELIHECLANFIRHMDEEELLSY 186
           LKKNPGCSWIEV KR++ F VEDKSHP+ ++I+EC++    H+++ ++LS+
Sbjct: 836 LKKNPGCSWIEVGKRIHPFVVEDKSHPQADMIYECMSILASHVEKYQVLSF 886


>ref|XP_003545819.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27110-like [Glycine max]
          Length = 705

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 25/46 (54%), Positives = 36/46 (78%)
 Frame = -2

Query: 338 LKKNPGCSWIEVDKRLNLFFVEDKSHPEVELIHECLANFIRHMDEE 201
           LKKNPGCSWIE+++++  FFVED SH  +EL+ +CL+    HM++E
Sbjct: 644 LKKNPGCSWIEINQKILPFFVEDNSHLHLELVFKCLSYLSDHMEDE 689


>ref|XP_003530713.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27110-like [Glycine max]
          Length = 705

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 25/46 (54%), Positives = 36/46 (78%)
 Frame = -2

Query: 338 LKKNPGCSWIEVDKRLNLFFVEDKSHPEVELIHECLANFIRHMDEE 201
           LKKNPGCSWIE+++++  FFVED SH  +EL+ +CL+    HM++E
Sbjct: 644 LKKNPGCSWIEINQKILPFFVEDNSHLHLELVFKCLSYLSDHMEDE 689