BLASTX nr result

ID: Coptis25_contig00044195 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00044195
         (561 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002297751.1| cc-nbs-lrr resistance protein [Populus trich...   129   4e-28
ref|XP_002269779.2| PREDICTED: putative disease resistance prote...   124   1e-26
emb|CAN60801.1| hypothetical protein VITISV_022857 [Vitis vinifera]   124   1e-26
ref|XP_003633531.1| PREDICTED: putative disease resistance prote...   122   5e-26
ref|XP_002274375.1| PREDICTED: putative disease resistance prote...   120   1e-25

>ref|XP_002297751.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
            gi|222845009|gb|EEE82556.1| cc-nbs-lrr resistance protein
            [Populus trichocarpa]
          Length = 1093

 Score =  129 bits (323), Expect = 4e-28
 Identities = 66/184 (35%), Positives = 108/184 (58%)
 Frame = -1

Query: 555  YGGATFPSWIRNGSLSTLETLCLSNFRKCGHLPPVWQLPKLKNLKMHGMYGLKRIGADFF 376
            Y GA FP+W+   SLS LE +   +   C  LPP+ QLP LK+L ++ M  ++ IG +F+
Sbjct: 752  YPGAKFPNWMGYSSLSHLEKIEFFHCNYCKTLPPLGQLPSLKSLSIYMMCEVENIGREFY 811

Query: 375  GDGAVRGFLSLEMLEIKDMPILEDWSGVEAGEFPCLKEFTIWDCPKLEXXXXXXXXXTIF 196
            G+G ++GF SLE L+++DM  L++W  ++ GEFP L+E  + +CP               
Sbjct: 812  GEGKIKGFPSLEKLKLEDMRNLKEWQEIDHGEFPKLQELAVLNCP--------------- 856

Query: 195  EIANCKGLKTLPSVPSIQKLVVGQCDQMLLSSLVCFRSLSSLTVSHFSKLECFPDGVLQH 16
                   + +LP  P++ +L++  C++ + SS+    SLSSL +S+F + E FP+G+ Q 
Sbjct: 857  ------NISSLPKFPALCELLLDDCNETIWSSVPLLTSLSSLKISNFRRTEVFPEGLFQA 910

Query: 15   MVSL 4
            + SL
Sbjct: 911  LSSL 914


>ref|XP_002269779.2| PREDICTED: putative disease resistance protein RGA3-like [Vitis
            vinifera]
          Length = 1091

 Score =  124 bits (311), Expect = 1e-26
 Identities = 71/184 (38%), Positives = 103/184 (55%)
 Frame = -1

Query: 555  YGGATFPSWIRNGSLSTLETLCLSNFRKCGHLPPVWQLPKLKNLKMHGMYGLKRIGADFF 376
            Y GA FP+W+    LS LE + LS       LPP+ QLP LK L +  M  L+ I  +F 
Sbjct: 750  YHGAKFPNWMGYSLLSRLERIELSQCTYSRILPPLGQLPLLKYLSIDTMSELESISCEFC 809

Query: 375  GDGAVRGFLSLEMLEIKDMPILEDWSGVEAGEFPCLKEFTIWDCPKLEXXXXXXXXXTIF 196
            G+G +RGF SLE ++++DM  L++W  +E G+FP L E TI + P               
Sbjct: 810  GEGQIRGFPSLEKMKLEDMKNLKEWHEIEEGDFPRLHELTIKNSP--------------- 854

Query: 195  EIANCKGLKTLPSVPSIQKLVVGQCDQMLLSSLVCFRSLSSLTVSHFSKLECFPDGVLQH 16
                     +LP  PS+  LV+ +C++M+L S+    SLSSL +S+F +L   P+G+LQH
Sbjct: 855  ------NFASLPKFPSLCDLVLDECNEMILGSVQFLSSLSSLKISNFRRLALLPEGLLQH 908

Query: 15   MVSL 4
            + SL
Sbjct: 909  LNSL 912


>emb|CAN60801.1| hypothetical protein VITISV_022857 [Vitis vinifera]
          Length = 951

 Score =  124 bits (311), Expect = 1e-26
 Identities = 71/184 (38%), Positives = 103/184 (55%)
 Frame = -1

Query: 555  YGGATFPSWIRNGSLSTLETLCLSNFRKCGHLPPVWQLPKLKNLKMHGMYGLKRIGADFF 376
            Y GA FP+W+    LS LE + LS       LPP+ QLP LK L +  M  L+ I  +F 
Sbjct: 610  YHGAKFPNWMGYSLLSRLERIELSQCTYSRILPPLGQLPLLKYLSIDTMSELESISCEFC 669

Query: 375  GDGAVRGFLSLEMLEIKDMPILEDWSGVEAGEFPCLKEFTIWDCPKLEXXXXXXXXXTIF 196
            G+G +RGF SLE ++++DM  L++W  +E G+FP L E TI + P               
Sbjct: 670  GEGQIRGFPSLEKMKLEDMKNLKEWHEIEEGDFPRLHELTIKNSP--------------- 714

Query: 195  EIANCKGLKTLPSVPSIQKLVVGQCDQMLLSSLVCFRSLSSLTVSHFSKLECFPDGVLQH 16
                     +LP  PS+  LV+ +C++M+L S+    SLSSL +S+F +L   P+G+LQH
Sbjct: 715  ------NFASLPKFPSLCDLVLDECNEMILGSVQFLSSLSSLKISNFRRLALLPEGLLQH 768

Query: 15   MVSL 4
            + SL
Sbjct: 769  LNSL 772


>ref|XP_003633531.1| PREDICTED: putative disease resistance protein RGA3-like [Vitis
            vinifera]
          Length = 961

 Score =  122 bits (305), Expect = 5e-26
 Identities = 70/184 (38%), Positives = 102/184 (55%)
 Frame = -1

Query: 555  YGGATFPSWIRNGSLSTLETLCLSNFRKCGHLPPVWQLPKLKNLKMHGMYGLKRIGADFF 376
            Y GA FP+W+    L  LE + LS       LPP+ QLP LK L +  M  L+ I  +F 
Sbjct: 657  YHGAKFPNWMGYSLLPRLERIELSQCTYSRILPPLGQLPLLKYLSIDTMSELESISCEFC 716

Query: 375  GDGAVRGFLSLEMLEIKDMPILEDWSGVEAGEFPCLKEFTIWDCPKLEXXXXXXXXXTIF 196
            G+G +RGF SLE ++++DM  L++W  +E G+FP L E TI + P               
Sbjct: 717  GEGQIRGFPSLEKMKLEDMKNLKEWHEIEDGDFPRLHELTIKNSP--------------- 761

Query: 195  EIANCKGLKTLPSVPSIQKLVVGQCDQMLLSSLVCFRSLSSLTVSHFSKLECFPDGVLQH 16
                     +LP  PS+  LV+ +C++M+L S+    SLSSL +S+F +L   P+G+LQH
Sbjct: 762  ------NFASLPKFPSLCDLVLDECNEMILGSVQFLSSLSSLKISNFRRLALLPEGLLQH 815

Query: 15   MVSL 4
            + SL
Sbjct: 816  LNSL 819


>ref|XP_002274375.1| PREDICTED: putative disease resistance protein At3g14460-like [Vitis
            vinifera]
          Length = 1427

 Score =  120 bits (302), Expect = 1e-25
 Identities = 85/244 (34%), Positives = 118/244 (48%), Gaps = 58/244 (23%)
 Frame = -1

Query: 561  QNYGGATFPSWIRNGSLSTLETLCLSNFRKCGHLPPVWQLPKLKNLKMHGMYGLKRIGAD 382
            ++Y GA FPSW+ +  LS L  L L    KC  LP +  LP L+NL + GM+G+KR+G +
Sbjct: 779  KSYDGARFPSWMGDPLLSNLARLELIGCTKCESLPSLGLLPSLRNLVIDGMHGVKRMGHE 838

Query: 381  FFGDG-AVRGFLSLEMLEIKDMPILEDW-SGVEAG---EFPCLKEFTIWDCPKLEXXXXX 217
            F+GDG +++ F SLE L + +M  LE+W SGVE     EFPCL E TIW+CP L      
Sbjct: 839  FYGDGCSLQPFQSLETLMLDNMLELEEWSSGVEESGVREFPCLHELTIWNCPNLRRLSPR 898

Query: 216  XXXXTIFEIANCK---GLKTLPSV------------------------------------ 154
                T  EI  C+    LK LPSV                                    
Sbjct: 899  FPALTNLEIRYCEKLDSLKRLPSVGNSVDSGELPCLHQLSILGCPKLRELPDCFSSLLRL 958

Query: 153  --------------PSIQKLVVGQCDQMLLSSLVCFRSLSSLTVSHFSKLECFPDGVLQH 16
                          P + +L + +CD  +L S+V   SL+SL +S  S L C P+G+ ++
Sbjct: 959  EIYKCSELSSLPRLPLLCELDLEECDGTILRSVVDLMSLTSLHISGISNLVCLPEGMFKN 1018

Query: 15   MVSL 4
            + SL
Sbjct: 1019 LASL 1022


Top