BLASTX nr result
ID: Coptis25_contig00044180
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00044180 (376 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002278668.2| PREDICTED: pentatricopeptide repeat-containi... 135 3e-30 emb|CBI16904.3| unnamed protein product [Vitis vinifera] 135 3e-30 emb|CAN67492.1| hypothetical protein VITISV_035978 [Vitis vinifera] 135 3e-30 ref|XP_002331286.1| predicted protein [Populus trichocarpa] gi|2... 132 4e-29 ref|XP_002884315.1| pentatricopeptide repeat-containing protein ... 131 5e-29 >ref|XP_002278668.2| PREDICTED: pentatricopeptide repeat-containing protein At3g02330-like [Vitis vinifera] Length = 877 Score = 135 bits (340), Expect = 3e-30 Identities = 64/121 (52%), Positives = 89/121 (73%) Frame = -2 Query: 375 LHSCASLATVEEGKQIHAQIIKSDSNIKSDVFVNSGLVEMYSKCGYVTEAKLIFDKMPER 196 L +CA+L TVE GKQIHAQIIK + ++SD +++S LV+MYSKCG + + +LIF+K P R Sbjct: 585 LDTCANLVTVELGKQIHAQIIKKE--LQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNR 642 Query: 195 DLPAWNAMITGLAQHGHAEMAIEVFQGLLNMPNIQPNHITFVGVLSACSYRGLVEEGYRY 16 D WNAM+ G AQHG E A+++F+ + + N++PNH TF+ VL AC + GLVE+G Y Sbjct: 643 DFVTWNAMVCGYAQHGLGEEALKIFE-YMQLENVKPNHATFLAVLRACGHMGLVEKGLHY 701 Query: 15 F 13 F Sbjct: 702 F 702 Score = 75.5 bits (184), Expect = 4e-12 Identities = 40/117 (34%), Positives = 68/117 (58%) Frame = -2 Query: 375 LHSCASLATVEEGKQIHAQIIKSDSNIKSDVFVNSGLVEMYSKCGYVTEAKLIFDKMPER 196 L +CA + G +IH +IIKS + D FV L++MYSKCG + +A+ + D++ E+ Sbjct: 484 LKACAGWQALNCGMEIHNRIIKSRLGL--DSFVGIALIDMYSKCGMMEKAEKLHDRLAEQ 541 Query: 195 DLPAWNAMITGLAQHGHAEMAIEVFQGLLNMPNIQPNHITFVGVLSACSYRGLVEEG 25 + +WNA+I+G + +E A + F +L M + P++ T+ +L C+ VE G Sbjct: 542 TVVSWNAIISGFSLQKQSEEAQKTFSKMLEM-GVDPDNFTYATILDTCANLVTVELG 597 Score = 71.2 bits (173), Expect = 8e-11 Identities = 37/107 (34%), Positives = 64/107 (59%) Frame = -2 Query: 369 SCASLATVEEGKQIHAQIIKSDSNIKSDVFVNSGLVEMYSKCGYVTEAKLIFDKMPERDL 190 +CA + EG Q+H +KS +S++ V + +++MY KCG + EA L+F++M RD Sbjct: 385 ACAVIKGDLEGLQVHGLSMKS--LCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDA 442 Query: 189 PAWNAMITGLAQHGHAEMAIEVFQGLLNMPNIQPNHITFVGVLSACS 49 +WNA+I Q+G+ E + +F +L ++P+ T+ VL AC+ Sbjct: 443 VSWNAIIAAHEQNGNEEKTLSLFVWML-QSGMEPDEFTYGSVLKACA 488 Score = 63.2 bits (152), Expect = 2e-08 Identities = 31/107 (28%), Positives = 61/107 (57%) Frame = -2 Query: 369 SCASLATVEEGKQIHAQIIKSDSNIKSDVFVNSGLVEMYSKCGYVTEAKLIFDKMPERDL 190 SCA L+ + G Q+H +K+D +DV + + ++MY KC +++A+ +F+ +P +L Sbjct: 284 SCAGLSALRLGSQLHGHALKTDFG--TDVVIGTATLDMYMKCNNLSDAQKLFNSLPNHNL 341 Query: 189 PAWNAMITGLAQHGHAEMAIEVFQGLLNMPNIQPNHITFVGVLSACS 49 ++NA+I G A+ A+ +F+ LL + + ++ G AC+ Sbjct: 342 QSYNAIIVGYARSDKGIEALGMFR-LLQKSGLGLDEVSLSGAFRACA 387 Score = 61.6 bits (148), Expect = 6e-08 Identities = 32/85 (37%), Positives = 50/85 (58%) Frame = -2 Query: 366 CASLATVEEGKQIHAQIIKSDSNIKSDVFVNSGLVEMYSKCGYVTEAKLIFDKMPERDLP 187 C+ + GKQ HA++I ++ K VFV + L++MY KC + A +FD MP+RD Sbjct: 52 CSDRKALCPGKQAHARMILTE--FKPTVFVTNCLIQMYIKCSDLEFAFKVFDGMPQRDTV 109 Query: 186 AWNAMITGLAQHGHAEMAIEVFQGL 112 +WNAM+ G A G +A ++F + Sbjct: 110 SWNAMLFGYAGRGDIGVAQKLFDAM 134 Score = 55.5 bits (132), Expect = 5e-06 Identities = 33/109 (30%), Positives = 54/109 (49%) Frame = -2 Query: 375 LHSCASLATVEEGKQIHAQIIKSDSNIKSDVFVNSGLVEMYSKCGYVTEAKLIFDKMPER 196 L SC+SL G QIH +K DV S L++MY+KC + + F MPE+ Sbjct: 181 LKSCSSLEDHGGGIQIHGLAVKM--GFDCDVVTGSALLDMYAKCKKLDCSIQFFHSMPEK 238 Query: 195 DLPAWNAMITGLAQHGHAEMAIEVFQGLLNMPNIQPNHITFVGVLSACS 49 + +W+A+I G Q+ +E+F+ + + + TF V +C+ Sbjct: 239 NWVSWSAIIAGCVQNDDLRGGLELFKE-MQKAGVGVSQSTFASVFRSCA 286 >emb|CBI16904.3| unnamed protein product [Vitis vinifera] Length = 843 Score = 135 bits (340), Expect = 3e-30 Identities = 64/121 (52%), Positives = 89/121 (73%) Frame = -2 Query: 375 LHSCASLATVEEGKQIHAQIIKSDSNIKSDVFVNSGLVEMYSKCGYVTEAKLIFDKMPER 196 L +CA+L TVE GKQIHAQIIK + ++SD +++S LV+MYSKCG + + +LIF+K P R Sbjct: 538 LDTCANLVTVELGKQIHAQIIKKE--LQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNR 595 Query: 195 DLPAWNAMITGLAQHGHAEMAIEVFQGLLNMPNIQPNHITFVGVLSACSYRGLVEEGYRY 16 D WNAM+ G AQHG E A+++F+ + + N++PNH TF+ VL AC + GLVE+G Y Sbjct: 596 DFVTWNAMVCGYAQHGLGEEALKIFE-YMQLENVKPNHATFLAVLRACGHMGLVEKGLHY 654 Query: 15 F 13 F Sbjct: 655 F 655 Score = 68.6 bits (166), Expect = 5e-10 Identities = 36/102 (35%), Positives = 61/102 (59%) Frame = -2 Query: 330 IHAQIIKSDSNIKSDVFVNSGLVEMYSKCGYVTEAKLIFDKMPERDLPAWNAMITGLAQH 151 IH +IIKS + D FV L++MYSKCG + +A+ + D++ E+ + +WNA+I+G + Sbjct: 452 IHNRIIKSRLGL--DSFVGIALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQ 509 Query: 150 GHAEMAIEVFQGLLNMPNIQPNHITFVGVLSACSYRGLVEEG 25 +E A + F +L M + P++ T+ +L C+ VE G Sbjct: 510 KQSEEAQKTFSKMLEM-GVDPDNFTYATILDTCANLVTVELG 550 Score = 61.6 bits (148), Expect = 6e-08 Identities = 32/85 (37%), Positives = 50/85 (58%) Frame = -2 Query: 366 CASLATVEEGKQIHAQIIKSDSNIKSDVFVNSGLVEMYSKCGYVTEAKLIFDKMPERDLP 187 C+ + GKQ HA++I ++ K VFV + L++MY KC + A +FD MP+RD Sbjct: 52 CSDRKALCPGKQAHARMILTE--FKPTVFVTNCLIQMYIKCSDLEFAFKVFDGMPQRDTV 109 Query: 186 AWNAMITGLAQHGHAEMAIEVFQGL 112 +WNAM+ G A G +A ++F + Sbjct: 110 SWNAMLFGYAGRGDIGVAQKLFDAM 134 Score = 60.8 bits (146), Expect = 1e-07 Identities = 30/83 (36%), Positives = 51/83 (61%) Frame = -2 Query: 369 SCASLATVEEGKQIHAQIIKSDSNIKSDVFVNSGLVEMYSKCGYVTEAKLIFDKMPERDL 190 +CA + EG Q+H +KS +S++ V + +++MY KCG + EA L+F++M RD Sbjct: 371 ACAVIKGDLEGLQVHGLSMKS--LCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDA 428 Query: 189 PAWNAMITGLAQHGHAEMAIEVF 121 +WNA+I Q+G+ E + +F Sbjct: 429 VSWNAIIAAHEQNGNEEKTLSLF 451 Score = 56.6 bits (135), Expect = 2e-06 Identities = 24/72 (33%), Positives = 46/72 (63%) Frame = -2 Query: 369 SCASLATVEEGKQIHAQIIKSDSNIKSDVFVNSGLVEMYSKCGYVTEAKLIFDKMPERDL 190 SCA L+ + G Q+H +K+D +DV + + ++MY KC +++A+ +F+ +P +L Sbjct: 284 SCAGLSALRLGSQLHGHALKTDFG--TDVVIGTATLDMYMKCNNLSDAQKLFNSLPNHNL 341 Query: 189 PAWNAMITGLAQ 154 ++NA+I G A+ Sbjct: 342 QSYNAIIVGYAR 353 Score = 55.5 bits (132), Expect = 5e-06 Identities = 33/109 (30%), Positives = 54/109 (49%) Frame = -2 Query: 375 LHSCASLATVEEGKQIHAQIIKSDSNIKSDVFVNSGLVEMYSKCGYVTEAKLIFDKMPER 196 L SC+SL G QIH +K DV S L++MY+KC + + F MPE+ Sbjct: 181 LKSCSSLEDHGGGIQIHGLAVKM--GFDCDVVTGSALLDMYAKCKKLDCSIQFFHSMPEK 238 Query: 195 DLPAWNAMITGLAQHGHAEMAIEVFQGLLNMPNIQPNHITFVGVLSACS 49 + +W+A+I G Q+ +E+F+ + + + TF V +C+ Sbjct: 239 NWVSWSAIIAGCVQNDDLRGGLELFKE-MQKAGVGVSQSTFASVFRSCA 286 >emb|CAN67492.1| hypothetical protein VITISV_035978 [Vitis vinifera] Length = 814 Score = 135 bits (340), Expect = 3e-30 Identities = 64/121 (52%), Positives = 89/121 (73%) Frame = -2 Query: 375 LHSCASLATVEEGKQIHAQIIKSDSNIKSDVFVNSGLVEMYSKCGYVTEAKLIFDKMPER 196 L +CA+L TVE GKQIHAQIIK + ++SD +++S LV+MYSKCG + + +LIF+K P R Sbjct: 522 LDTCANLVTVELGKQIHAQIIKKE--LQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNR 579 Query: 195 DLPAWNAMITGLAQHGHAEMAIEVFQGLLNMPNIQPNHITFVGVLSACSYRGLVEEGYRY 16 D WNAM+ G AQHG E A+++F+ + + N++PNH TF+ VL AC + GLVE+G Y Sbjct: 580 DFVTWNAMVCGYAQHGLGEEALKIFE-YMQLENVKPNHATFLAVLRACGHMGLVEKGLHY 638 Query: 15 F 13 F Sbjct: 639 F 639 Score = 75.9 bits (185), Expect = 3e-12 Identities = 40/117 (34%), Positives = 68/117 (58%) Frame = -2 Query: 375 LHSCASLATVEEGKQIHAQIIKSDSNIKSDVFVNSGLVEMYSKCGYVTEAKLIFDKMPER 196 L +CA + G +IH +IIKS + D FV L++MYSKCG + +A+ + D++ E+ Sbjct: 421 LKACAGWQALNCGMEIHNRIIKSRMGL--DSFVGIALIDMYSKCGMMEKAEKLHDRLAEQ 478 Query: 195 DLPAWNAMITGLAQHGHAEMAIEVFQGLLNMPNIQPNHITFVGVLSACSYRGLVEEG 25 + +WNA+I+G + +E A + F +L M + P++ T+ +L C+ VE G Sbjct: 479 TVVSWNAIISGFSLQKQSEEAQKTFSKMLEM-GVDPDNFTYATILDTCANLVTVELG 534 Score = 71.2 bits (173), Expect = 8e-11 Identities = 37/107 (34%), Positives = 64/107 (59%) Frame = -2 Query: 369 SCASLATVEEGKQIHAQIIKSDSNIKSDVFVNSGLVEMYSKCGYVTEAKLIFDKMPERDL 190 +CA + EG Q+H +KS +S++ V + +++MY KCG + EA L+F++M RD Sbjct: 322 ACAVIKGDLEGLQVHGLSMKS--LCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDA 379 Query: 189 PAWNAMITGLAQHGHAEMAIEVFQGLLNMPNIQPNHITFVGVLSACS 49 +WNA+I Q+G+ E + +F +L ++P+ T+ VL AC+ Sbjct: 380 VSWNAIIAAHEQNGNEEKTLSLFVWML-QSGMEPDEFTYGSVLKACA 425 Score = 61.2 bits (147), Expect = 8e-08 Identities = 32/85 (37%), Positives = 50/85 (58%) Frame = -2 Query: 366 CASLATVEEGKQIHAQIIKSDSNIKSDVFVNSGLVEMYSKCGYVTEAKLIFDKMPERDLP 187 C+ + GKQ HA++I ++ K VFV + L++MY KC + A +FD MP+RD Sbjct: 52 CSDRKALCPGKQAHARMILTE--FKPTVFVTNCLIQMYIKCSDLGFAFKVFDGMPQRDTV 109 Query: 186 AWNAMITGLAQHGHAEMAIEVFQGL 112 +WNAM+ G A G +A ++F + Sbjct: 110 SWNAMLFGYAGRGDIGVAQKLFDAM 134 >ref|XP_002331286.1| predicted protein [Populus trichocarpa] gi|222873711|gb|EEF10842.1| predicted protein [Populus trichocarpa] Length = 897 Score = 132 bits (331), Expect = 4e-29 Identities = 63/124 (50%), Positives = 92/124 (74%) Frame = -2 Query: 375 LHSCASLATVEEGKQIHAQIIKSDSNIKSDVFVNSGLVEMYSKCGYVTEAKLIFDKMPER 196 L +CA+LATV GKQIHAQIIK + ++SDV++ S LV+MYSKCG + +++L+F+K P R Sbjct: 592 LDTCANLATVGLGKQIHAQIIKQE--LQSDVYICSTLVDMYSKCGNMQDSQLMFEKAPNR 649 Query: 195 DLPAWNAMITGLAQHGHAEMAIEVFQGLLNMPNIQPNHITFVGVLSACSYRGLVEEGYRY 16 D WNAM+ G A HG E A+++F+ + + N++PNH TFV VL AC++ GLV++G Y Sbjct: 650 DFVTWNAMLCGYAHHGLGEEALKLFES-MQLVNVKPNHATFVSVLRACAHMGLVDKGLHY 708 Query: 15 FKLI 4 F ++ Sbjct: 709 FDVM 712 Score = 75.9 bits (185), Expect = 3e-12 Identities = 40/117 (34%), Positives = 68/117 (58%) Frame = -2 Query: 375 LHSCASLATVEEGKQIHAQIIKSDSNIKSDVFVNSGLVEMYSKCGYVTEAKLIFDKMPER 196 L++CAS+ EG+Q+H +KS S S++ V + +++MY KC + EA +FD M R Sbjct: 390 LNACASIRGDLEGRQVHGLAVKSIS--MSNICVANAILDMYGKCKALAEASDLFDMMERR 447 Query: 195 DLPAWNAMITGLAQHGHAEMAIEVFQGLLNMPNIQPNHITFVGVLSACSYRGLVEEG 25 D +WNA+I Q+G+ E + F +++ ++P+ T+ VL AC+ R + G Sbjct: 448 DAVSWNAIIAACEQNGNEEETLAHFASMIH-SRMEPDDFTYGSVLKACAGRQALNTG 503 Score = 73.9 bits (180), Expect = 1e-11 Identities = 38/109 (34%), Positives = 62/109 (56%) Frame = -2 Query: 375 LHSCASLATVEEGKQIHAQIIKSDSNIKSDVFVNSGLVEMYSKCGYVTEAKLIFDKMPER 196 L +CA + G +IH +IIKS D FV + LV+MY KCG + +A I D+ ++ Sbjct: 491 LKACAGRQALNTGMEIHTRIIKSGMGF--DSFVGAALVDMYCKCGMIEKADKIHDRTEQK 548 Query: 195 DLPAWNAMITGLAQHGHAEMAIEVFQGLLNMPNIQPNHITFVGVLSACS 49 + +WNA+I+G + +E A + F +L M + P++ T+ VL C+ Sbjct: 549 TMVSWNAIISGFSLLQQSEDAHKFFSRMLEM-GVNPDNFTYAAVLDTCA 596 Score = 71.2 bits (173), Expect = 8e-11 Identities = 41/114 (35%), Positives = 68/114 (59%), Gaps = 1/114 (0%) Frame = -2 Query: 369 SCASLATVEEGKQIHAQIIKSDSNIKSDVFVNSGLVEMYSKCGYVTEAKLIFDKMPERDL 190 SCA+L+ + GK++H+ +KS SD+ V + ++MY+KCG + +A+ + MP+ L Sbjct: 291 SCAALSALRLGKELHSHALKSAFG--SDIIVGTATLDMYAKCGRMADAQKVLSSMPKCSL 348 Query: 189 PAWNAMITGLAQHGHAEMAIEVFQGLLNMPNIQPNHITFVGVLSAC-SYRGLVE 31 ++NA+I G A+ A++ FQ LL + + IT G L+AC S RG +E Sbjct: 349 QSYNAIIVGYARSDRGFQALKSFQ-LLLKTGLGFDEITLSGALNACASIRGDLE 401 Score = 55.8 bits (133), Expect = 3e-06 Identities = 26/86 (30%), Positives = 48/86 (55%) Frame = -2 Query: 375 LHSCASLATVEEGKQIHAQIIKSDSNIKSDVFVNSGLVEMYSKCGYVTEAKLIFDKMPER 196 L +C +L + G Q+H ++K DV S L+ MY+KC + ++ +F ++PE+ Sbjct: 188 LKACGALEECDMGVQVHGLVVKF--GFDCDVVTGSALLGMYAKCKRLDDSLSVFSELPEK 245 Query: 195 DLPAWNAMITGLAQHGHAEMAIEVFQ 118 + +W+AMI G Q+ +E+F+ Sbjct: 246 NWVSWSAMIAGCVQNDRNVEGLELFK 271 >ref|XP_002884315.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata subsp. lyrata] gi|297330155|gb|EFH60574.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata subsp. lyrata] Length = 861 Score = 131 bits (330), Expect = 5e-29 Identities = 60/125 (48%), Positives = 94/125 (75%) Frame = -2 Query: 375 LHSCASLATVEEGKQIHAQIIKSDSNIKSDVFVNSGLVEMYSKCGYVTEAKLIFDKMPER 196 L +CA+LA+ GKQIHAQ+IK + ++SDV+++S LV+MYSKCG + +++L+F+K R Sbjct: 568 LDTCANLASAGLGKQIHAQVIKKE--LQSDVYISSTLVDMYSKCGDLHDSRLMFEKSLRR 625 Query: 195 DLPAWNAMITGLAQHGHAEMAIEVFQGLLNMPNIQPNHITFVGVLSACSYRGLVEEGYRY 16 D WNAMI G A HG E AI++F+ ++ + NI+PNH+TF+ +L AC++ GL+++G Y Sbjct: 626 DFVTWNAMICGYAHHGKGEEAIQLFERMI-LENIKPNHVTFISILRACAHMGLIDKGLEY 684 Query: 15 FKLIK 1 F ++K Sbjct: 685 FYMMK 689 Score = 73.2 bits (178), Expect = 2e-11 Identities = 41/123 (33%), Positives = 71/123 (57%) Frame = -2 Query: 375 LHSCASLATVEEGKQIHAQIIKSDSNIKSDVFVNSGLVEMYSKCGYVTEAKLIFDKMPER 196 L SCA+L+ + G Q+HA +KSD +D V + ++MY+KC + +A+++FDK Sbjct: 246 LRSCAALSELRLGGQLHAHALKSD--FAADGIVRTATLDMYAKCDNMQDAQILFDKSENL 303 Query: 195 DLPAWNAMITGLAQHGHAEMAIEVFQGLLNMPNIQPNHITFVGVLSACSYRGLVEEGYRY 16 + ++NAMITG +Q H A+ +F L++ + + I+ GV AC+ + EG + Sbjct: 304 NRQSYNAMITGYSQEEHGFKALLLFHRLMS-SGLGFDEISLSGVFRACALVKGLSEGLQI 362 Query: 15 FKL 7 + L Sbjct: 363 YDL 365 Score = 68.9 bits (167), Expect = 4e-10 Identities = 39/107 (36%), Positives = 60/107 (56%) Frame = -2 Query: 369 SCASLATVEEGKQIHAQIIKSDSNIKSDVFVNSGLVEMYSKCGYVTEAKLIFDKMPERDL 190 +CA + + EG QI+ IKS ++ DV V + ++MY KC + EA +FD+M RD Sbjct: 349 ACALVKGLSEGLQIYDLAIKSSLSL--DVCVANAAIDMYGKCQALAEAFRVFDEMRRRDA 406 Query: 189 PAWNAMITGLAQHGHAEMAIEVFQGLLNMPNIQPNHITFVGVLSACS 49 +WNA+I Q+G + +F +L I+P+ TF VL AC+ Sbjct: 407 VSWNAIIAAHEQNGKGYETLFLFVSMLR-SRIEPDEFTFGSVLKACT 452