BLASTX nr result

ID: Coptis25_contig00044167 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00044167
         (246 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN79785.1| hypothetical protein VITISV_002634 [Vitis vinifera]   144   1e-32
gb|ACB28472.1| polyprotein [Ananas comosus]                           122   4e-26
emb|CAN60890.1| hypothetical protein VITISV_011880 [Vitis vinifera]   122   4e-26
emb|CAN76793.1| hypothetical protein VITISV_026680 [Vitis vinifera]   121   7e-26
emb|CAN80132.1| hypothetical protein VITISV_012031 [Vitis vinifera]   120   1e-25

>emb|CAN79785.1| hypothetical protein VITISV_002634 [Vitis vinifera]
          Length = 245

 Score =  144 bits (362), Expect = 1e-32
 Identities = 62/82 (75%), Positives = 75/82 (91%)
 Frame = -1

Query: 246 IPNQVWEDISMDFINGLPISNGKTTILVVVDRLSKYTHFLSLSHPYTAIGVARVFFDNIF 67
           +P QVWEDISMDFI+ LP SNGK+TI VVVDRLSKY +F+++SHPYTA GVAR+FFD+IF
Sbjct: 103 VPTQVWEDISMDFIDSLPHSNGKSTIFVVVDRLSKYAYFIAISHPYTAFGVARIFFDSIF 162

Query: 66  KLHGMPRTVVCDRDPTFTSIFW 1
           +LHG+PR++VCDRDPTFTS FW
Sbjct: 163 RLHGVPRSIVCDRDPTFTSAFW 184


>gb|ACB28472.1| polyprotein [Ananas comosus]
          Length = 953

 Score =  122 bits (305), Expect = 4e-26
 Identities = 55/82 (67%), Positives = 65/82 (79%)
 Frame = -1

Query: 246  IPNQVWEDISMDFINGLPISNGKTTILVVVDRLSKYTHFLSLSHPYTAIGVARVFFDNIF 67
            IP  +W +ISMDFI GLP S GK  I+VVVDRLSKY HF++LSHPYTA  VA++F DNI+
Sbjct: 772  IPEGIWTEISMDFIEGLPNSQGKEVIMVVVDRLSKYAHFIALSHPYTASSVAQLFLDNIY 831

Query: 66   KLHGMPRTVVCDRDPTFTSIFW 1
            KLHGMPR++V DRD  F S FW
Sbjct: 832  KLHGMPRSIVSDRDTIFVSQFW 853


>emb|CAN60890.1| hypothetical protein VITISV_011880 [Vitis vinifera]
          Length = 1378

 Score =  122 bits (305), Expect = 4e-26
 Identities = 53/82 (64%), Positives = 67/82 (81%)
 Frame = -1

Query: 246  IPNQVWEDISMDFINGLPISNGKTTILVVVDRLSKYTHFLSLSHPYTAIGVARVFFDNIF 67
            +P  V+ DI+MDFI GLP SNGKTTI VVVDRL+KY HF+ L HPYTA  VA+VF D+++
Sbjct: 1055 VPEGVFTDITMDFIEGLPKSNGKTTIFVVVDRLTKYGHFMLLPHPYTAKMVAQVFLDSVY 1114

Query: 66   KLHGMPRTVVCDRDPTFTSIFW 1
            KLHG+P ++ CDRDP FT++FW
Sbjct: 1115 KLHGLPHSITCDRDPIFTNVFW 1136


>emb|CAN76793.1| hypothetical protein VITISV_026680 [Vitis vinifera]
          Length = 1469

 Score =  121 bits (303), Expect = 7e-26
 Identities = 54/82 (65%), Positives = 65/82 (79%)
 Frame = -1

Query: 246  IPNQVWEDISMDFINGLPISNGKTTILVVVDRLSKYTHFLSLSHPYTAIGVARVFFDNIF 67
            IP +VW DIS+DFI GLP S   + I+VVVDRLSKY HF+ +SHPYTA  +A+VF  NIF
Sbjct: 1113 IPTKVWTDISLDFIEGLPNSESYSVIMVVVDRLSKYAHFIPISHPYTASKIAQVFLANIF 1172

Query: 66   KLHGMPRTVVCDRDPTFTSIFW 1
            KLHG+P ++V DRDPTFTS FW
Sbjct: 1173 KLHGLPNSIVTDRDPTFTSTFW 1194


>emb|CAN80132.1| hypothetical protein VITISV_012031 [Vitis vinifera]
          Length = 1371

 Score =  120 bits (300), Expect = 1e-25
 Identities = 53/82 (64%), Positives = 66/82 (80%)
 Frame = -1

Query: 246  IPNQVWEDISMDFINGLPISNGKTTILVVVDRLSKYTHFLSLSHPYTAIGVARVFFDNIF 67
            +P  V+ DI+MDFI GLP SNGKT I VVVDRL+KY HF+ L HPYTA  VA+VF D+++
Sbjct: 1111 VPEGVFTDITMDFIEGLPKSNGKTEIFVVVDRLTKYGHFMLLPHPYTAKMVAQVFLDSVY 1170

Query: 66   KLHGMPRTVVCDRDPTFTSIFW 1
            KLHG+P ++ CDRDP FTS+FW
Sbjct: 1171 KLHGLPYSITCDRDPIFTSVFW 1192


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